Rv3806c - p.Arg240Cys
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
4 RR-TB
5 HR-TB
96 MDR-TB
44 Pre-XDR-TB
6 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.1.2 | 69 |
| lineage2.2.1 | 49 |
| lineage4.1.1.1 | 3 |
| lineage4.1.2.1 | 5 |
| 2 | |
| lineage3 | 3 |
| lineage4.4.2 | 4 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1 | 5 |
| lineage2.2.1.1 | 3 |
| lineage4.8 | 1 |
| lineage4.3.4.2 | 4 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4 | 1 |
| lineage4.6.1.1;lineage4.6.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 155 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6358907 | MDR-TB | lineage4.6.1.2 | None | ERR6358763 | MDR-TB | lineage4.6.1.2 | None | ERR6358929 | MDR-TB | lineage4.6.1.2 | None | ERR6358967 | MDR-TB | lineage4.6.1.2 | None | SRR1049688 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096520 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358746 | MDR-TB | lineage4.6.1.2 | None | SRR29094016 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358761 | MDR-TB | lineage4.6.1.2 | None | SRR29017589 | MDR-TB | lineage2.2.1 | None | SRR6479539 | Pre-XDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035079 | Pre-XDR-TB | lineage2.2.1 | za | SRR29016860 | MDR-TB | lineage4.1.1.1 | None | SRR10040195 | MDR-TB | lineage2.2.1 | None | ERR6358771 | MDR-TB | lineage4.6.1.2 | None | ERR4553909 | MDR-TB | lineage2.2.1 | None | SRR29093260 | Pre-XDR-TB | lineage2.2.1 | None | ERR234601 | Pre-XDR-TB | lineage2.2.1 | ru | ERR6358820 | MDR-TB | lineage4.6.1.2 | None | SRR29093334 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359052 | MDR-TB | lineage4.6.1.2 | None | ERR4798017 | XDR-TB | lineage2.2.1 | in | SRR29093663 | HR-TB | lineage2.2.1 | None | ERR551104 | RR-TB | lineage4.1.2.1 | None | ERR2124079 | MDR-TB | lineage4.6.1.2 | None | ERR6358917 | MDR-TB | lineage4.6.1.2 | None | ERR6359051 | MDR-TB | lineage4.6.1.2 | None | ERR4811293 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4553712 | MDR-TB | None | ERR7911540 | Pre-XDR-TB | lineage2.2.1 | za | ERR5866504 | Pre-XDR-TB | lineage2.2.1 | None | ERR040131 | MDR-TB | lineage4.6.1.2 | ug | ERR1873527 | Pre-XDR-TB | lineage2.2.1 | za | ERR2516232 | MDR-TB | lineage4.6.1.2 | be | SRR4423159 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017163 | MDR-TB | lineage4.1.1.1 | None | SRR29017068 | MDR-TB | lineage2.2.1 | None | ERR13266432 | Pre-XDR-TB | lineage3 | None | ERR6358806 | MDR-TB | lineage4.6.1.2 | None | SRR10040141 | MDR-TB | lineage4.4.2 | None | ERR6358752 | MDR-TB | lineage4.6.1.2 | None | ERR6358904 | MDR-TB | lineage4.6.1.2 | None | ERR6358805 | MDR-TB | lineage4.6.1.2 | None | ERR6358939 | MDR-TB | lineage4.6.1.2 | None | SRR1062917 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806979 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287877 | MDR-TB | lineage4.1.1.3 | pe | ERR6358793 | MDR-TB | lineage4.6.1.2 | None | ERR4553620 | HR-TB | lineage2.2.1 | None | ERR6358767 | MDR-TB | lineage4.6.1.2 | None | ERR11488951 | XDR-TB | lineage4.4.1.1 | None | SRR29017132 | MDR-TB | lineage2.2.1 | None | ERR3132267 | MDR-TB | lineage4.6.1.2 | None | SRR11567787 | MDR-TB | lineage2.2.1 | None | ERR6358934 | MDR-TB | lineage4.6.1.2 | None | ERR6359125 | MDR-TB | lineage4.6.1.2 | None | ERR5987313 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866505 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093610 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797657 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR6359118 | MDR-TB | lineage4.6.1.2 | None | ERR10680155 | MDR-TB | lineage4.8 | None | SRR29093330 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359022 | MDR-TB | lineage4.6.1.2 | None | SAMN02381027 | Pre-XDR-TB | lineage2.2.1 | ug | SRR27069394 | Pre-XDR-TB | lineage4.4.2 | None | SRR28393337 | MDR-TB | lineage4.6.1.2 | None | ERR4811199 | RR-TB | lineage4.4.2 | cn | ERR2707160 | MDR-TB | lineage4.3.4.2 | cd | ERR7911614 | Pre-XDR-TB | lineage2.2.1 | za | ERR6358779 | MDR-TB | lineage4.6.1.2 | None | ERR6358945 | MDR-TB | lineage4.6.1.2 | None | ERR6359095 | MDR-TB | lineage4.6.1.2 | None | ERR4553463 | HR-TB | lineage2.2.1;lineage4 | None | SRR3105733 | Pre-XDR-TB | lineage3 | None | SRR29093682 | Pre-XDR-TB | lineage2.2.1 | None | SRR12416832 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR6358807 | MDR-TB | lineage4.6.1.2 | None | ERR6359078 | MDR-TB | lineage4.6.1.2 | None | ERR6358928 | MDR-TB | lineage4.6.1.2 | None | ERR6358817 | MDR-TB | lineage4.6.1.2 | None | ERR8025723 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049687 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488353 | XDR-TB | lineage4.4.1.1 | None | ERR6358823 | MDR-TB | lineage4.6.1.2 | None | SRR17657944 | MDR-TB | lineage4.6.1.2 | None | ERR6358913 | MDR-TB | lineage4.6.1.2 | None | ERR6358828 | MDR-TB | lineage4.6.1.2 | None | ERR6358937 | MDR-TB | lineage4.6.1.2 | None | ERR6359128 | MDR-TB | lineage4.6.1.2 | None | ERR6358732 | MDR-TB | lineage4.6.1.2 | None | ERR6358774 | MDR-TB | lineage4.6.1.2 | None | ERR6358796 | MDR-TB | lineage4.6.1.2 | None | SRR13180326 | MDR-TB | lineage4.6.1.2 | None | SRR29096631 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358733 | MDR-TB | lineage4.6.1.2 | None | ERR6358957 | MDR-TB | lineage4.6.1.2 | None | ERR6359090 | MDR-TB | lineage4.6.1.2 | None | ERR11488890 | XDR-TB | lineage4.4.1.1 | None | ERR6359063 | MDR-TB | lineage4.6.1.2 | None | ERR6358737 | MDR-TB | lineage4.6.1.2 | None | ERR4800615 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017594 | MDR-TB | lineage2.2.1 | None | ERR4011081 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359054 | MDR-TB | lineage4.6.1.2 | None | ERR551105 | RR-TB | lineage4.1.2.1 | None | ERR3132089 | MDR-TB | lineage4.6.1.2 | None | ERR6358713 | MDR-TB | lineage4.6.1.2 | None | SRR29093571 | Pre-XDR-TB | lineage2.2.1 | None | SRR6797389 | MDR-TB | lineage4.1.1.1 | None | SRR16370581 | MDR-TB | lineage2.2.1.1 | None | ERR4829048 | Pre-XDR-TB | lineage3 | pk | ERR6359089 | MDR-TB | lineage4.6.1.2 | None | ERR6358920 | MDR-TB | lineage4.6.1.2 | None | SRR25207114 | RR-TB | lineage4.4.2 | None | SRR25206954 | Pre-XDR-TB | lineage2.2.1 | None | ERR551104_ERR551105 | MDR-TB | lineage4.1.2.1 | None | ERR6358804 | MDR-TB | lineage4.6.1.2 | None | ERR6358798 | MDR-TB | lineage4.6.1.2 | None | ERR4809192 | Pre-XDR-TB | lineage2.2.1 | za | ERR4553798 | MDR-TB | None | SRR1140694 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358757 | MDR-TB | lineage4.6.1.2 | None | SRR8651662 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911179 | MDR-TB | lineage2.2.1.1 | vn | SRR28393340 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR7911574 | Pre-XDR-TB | lineage2.2.1 | za | ERR2707207 | MDR-TB | lineage4.3.4.2 | cd | ERR7911655 | Pre-XDR-TB | lineage2.2.1 | za | ERR6358785 | MDR-TB | lineage4.6.1.2 | None | ERR6358911 | MDR-TB | lineage4.6.1.2 | None | ERR6358995 | MDR-TB | lineage4.6.1.2 | None | ERR6358996 | MDR-TB | lineage4.6.1.2 | None | SAMEA2533704 | MDR-TB | lineage4.1.2.1 | uz | ERR1193880 | Pre-XDR-TB | lineage4.3.2.1 | za | ERR2516576 | MDR-TB | lineage4 | pe | ERR11488380 | XDR-TB | lineage4.4.1.1 | None | SRR29231865 | MDR-TB | lineage4.3.4.2 | None | ERR11488352 | XDR-TB | lineage4.4.1.1 | None | SRR28859906 | MDR-TB | lineage4.1.2.1 | None | ERR4553483 | HR-TB | lineage2.2.1 | None | SRR29017006 | MDR-TB | lineage2.2.1;lineage4 | None | ERR6358935 | MDR-TB | lineage4.6.1.2 | None | ERR6358749 | MDR-TB | lineage4.6.1.1;lineage4.6.1.2 | None | ERR6358906 | MDR-TB | lineage4.6.1.2 | None | SRR11567786 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358765 | MDR-TB | lineage4.6.1.2 | None | SRR24256299 | MDR-TB | lineage2.2.1 | None | ERR6358956 | MDR-TB | lineage4.6.1.2 | None | ERR6359117 | MDR-TB | lineage4.6.1.2 | None | SRR29231755 | MDR-TB | lineage4.3.4.2 | None | ERR6358946 | MDR-TB | lineage4.6.1.2 | None | ERR4553692 | HR-TB | lineage2.2.1 | None | ERR6358736 | MDR-TB | lineage4.6.1.2 | None |
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