Rv3854c - c.-255C>T

Drug resistance types
220 Sensitive 0 RR-TB 3 HR-TB 0 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 2 Other
lineage Counts
lineage Count
lineage4.1.2 209
1
lineage1.2.2.1 12
lineage2.2.1 2
lineage3;lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 225
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1640334 Sensitive lineage4.1.2 ca
SRR1187945 Other lineage4.1.2 ca
SRR9588603 Sensitive lineage4.1.2 None
SRR1640254 Sensitive lineage4.1.2 ca
SRR6398074 Sensitive lineage4.1.2 ca
SRR9588589 Sensitive lineage4.1.2 None
SRR1188087 Sensitive lineage4.1.2 ca
SRR1187423 Sensitive lineage4.1.2 ca
SRR1188083 Sensitive lineage4.1.2 ca
SRR1190480 Sensitive lineage4.1.2 ca
SRR1187252 Sensitive lineage4.1.2 ca
SRR1187181 Sensitive lineage4.1.2 ca
SRR1188170 Sensitive lineage4.1.2 ca
SRR1640338 Sensitive lineage4.1.2 ca
SRR1640750 Other None
SRR9588566 Sensitive lineage4.1.2 None
SRR9588586 Sensitive lineage4.1.2 None
ERR2513197 Sensitive lineage1.2.2.1 gb
SRR1187946 Sensitive lineage4.1.2 ca
SRR9588558 Sensitive lineage4.1.2 None
SRR9588559 Sensitive lineage4.1.2 None
SRR1188439 Sensitive lineage4.1.2 ca
SRR9588565 Sensitive lineage4.1.2 None
SRR9588583 Sensitive lineage4.1.2 None
SRR9588601 Sensitive lineage4.1.2 None
SRR1640707 Sensitive lineage4.1.2 ca
SRR1186993 Sensitive lineage4.1.2 ca
SRR1188133 Sensitive lineage4.1.2 ca
SRR1367200 Sensitive lineage4.1.2 ca
SRR1190434 Sensitive lineage4.1.2 ca
SRR1187192 Sensitive lineage4.1.2 ca
SRR1187087 Sensitive lineage4.1.2 ca
SRR1640749 Sensitive lineage4.1.2 ca
ERR2514336 Sensitive lineage1.2.2.1 gb
SRR1640290 Sensitive lineage4.1.2 ca
SRR9588573 Sensitive lineage4.1.2 None
SRR6398063 Sensitive lineage4.1.2 ca
SRR1188492 Sensitive lineage4.1.2 ca
SRR12882041 Sensitive lineage1.2.2.1 None
SRR1640253 Sensitive lineage4.1.2 ca
SRR1640293 Sensitive lineage4.1.2 ca
SRR9588593 Sensitive lineage4.1.2 None
SRR1640539 Sensitive lineage4.1.2 ca
SRR1187629 Sensitive lineage4.1.2 ca
SRR9588580 Sensitive lineage4.1.2 None
SRR1640349 Sensitive lineage4.1.2 ca
SRR1640291 Sensitive lineage4.1.2 ca
SRR9588577 Sensitive lineage4.1.2 None
SRR7131273 Sensitive lineage1.2.2.1 None
SRR1187028 Sensitive lineage4.1.2 ca
SRR1187393 Sensitive lineage4.1.2 ca
SRR1188479 Sensitive lineage4.1.2 ca
SRR1367199 Sensitive lineage4.1.2 ca
SRR1640348 Sensitive lineage4.1.2 ca
SRR1640574 Sensitive lineage4.1.2 ca
SRR1640709 Sensitive lineage4.1.2 ca
SRR9588560 Sensitive lineage4.1.2 None
SRR1640541 Sensitive lineage4.1.2 ca
SRR9588562 Sensitive lineage4.1.2 None
SRR9588605 Sensitive lineage4.1.2 None
SRR1188174 Sensitive lineage4.1.2 ca
ERR11049292 Sensitive lineage1.2.2.1 None
SRR9588574 Sensitive lineage4.1.2 None
SRR9588585 Sensitive lineage4.1.2 None
SRR1640710 Sensitive lineage4.1.2 ca
SRR1186316 Sensitive lineage4.1.2 ca
SRR1190474 Sensitive lineage4.1.2 ca
SRR1640543 Sensitive lineage4.1.2 ca
SRR1640273 Sensitive lineage4.1.2 ca
SRR1640340 Sensitive lineage4.1.2 ca
SRR1187628 Sensitive lineage4.1.2 ca
SRR1187598 Sensitive lineage4.1.2 ca
SRR1187618 Sensitive lineage4.1.2 ca
SRR1188175 Sensitive lineage4.1.2 ca
SRR1191277 Sensitive lineage4.1.2 ca
SRR1188259 Sensitive lineage4.1.2 ca
SRR1187633 Sensitive lineage4.1.2 ca
SRR1191489 Sensitive lineage4.1.2 ca
SRR1640335 Sensitive lineage4.1.2 ca
SRR1188486 Sensitive lineage4.1.2 ca
SRR9588611 Sensitive lineage4.1.2 None
SRR9588588 Sensitive lineage4.1.2 None
SRR1187631 Sensitive lineage4.1.2 ca
SRR1640246 Sensitive lineage4.1.2 ca
SRR1187195 Sensitive lineage4.1.2 ca
SRR1190478 Sensitive lineage4.1.2 ca
SRR1188286 Sensitive lineage4.1.2 ca
SRR1188339 Sensitive lineage4.1.2 ca
SRR1190468 Sensitive lineage4.1.2 ca
SRR1640751 Sensitive lineage4.1.2 ca
SRR1187037 Sensitive lineage4.1.2 ca
SRR1188085 Sensitive lineage4.1.2 ca
SRR9588555 Sensitive lineage4.1.2 None
SRR9588591 Sensitive lineage4.1.2 None
SRR1640712 Sensitive lineage4.1.2 ca
ERR11049036 Sensitive lineage1.2.2.1 None
SRR1640564 Sensitive lineage4.1.2 ca
ERR11044750 Sensitive lineage2.2.1 None
SRR1187086 Sensitive lineage4.1.2 ca
SRR1188086 Sensitive lineage4.1.2 ca
SRR1640708 Sensitive lineage4.1.2 ca
SRR1640563 Sensitive lineage4.1.2 ca
SRR1640336 Sensitive lineage4.1.2 ca
SRR1640292 Sensitive lineage4.1.2 ca
SRR9588576 Sensitive lineage4.1.2 None
SRR1187251 Sensitive lineage4.1.2 ca
SRR1640316 Sensitive lineage4.1.2 ca
SRR1640549 Sensitive lineage4.1.2 ca
SRR9588606 Sensitive lineage4.1.2 None
SRR9588567 Sensitive lineage4.1.2 None
SRR1640327 Sensitive lineage4.1.2 ca
SRR9588556 Sensitive lineage4.1.2 None
SRR9588581 Sensitive lineage4.1.2 None
SRR1188184 Sensitive lineage4.1.2 ca
SRR1190475 Sensitive lineage4.1.2 ca
SRR9588561 Sensitive lineage4.1.2 None
SRR9588563 HR-TB lineage4.1.2 None
SRR1187576 Sensitive lineage4.1.2 ca
SRR9588613 Sensitive lineage4.1.2 None
SRR1640295 Sensitive lineage4.1.2 ca
SRR1188119 Sensitive lineage4.1.2 ca
SRR9588557 Sensitive lineage4.1.2 None
SRR1640346 Sensitive lineage4.1.2 None
SRR9588572 Sensitive lineage4.1.2 None
SRR1188359 Sensitive lineage4.1.2 ca
SRR9588604 Sensitive lineage4.1.2 None
SRR1187983 Sensitive lineage4.1.2 ca
SRR1190470 Sensitive lineage4.1.2 ca
SRR1187186 Sensitive lineage4.1.2 ca
SRR1640547 Sensitive lineage4.1.2 ca
SRR1640752 Sensitive lineage4.1.2 ca
SRR9588570 Sensitive lineage4.1.2 None
SRR9588584 Sensitive lineage4.1.2 None
SRR9588595 Sensitive lineage4.1.2 None
SRR9588598 Sensitive lineage4.1.2 None
SRR9588614 Sensitive lineage4.1.2 None
SRR1188143 Sensitive lineage4.1.2 ca
SRR9588587 Sensitive lineage4.1.2 None
SRR1188181 Sensitive lineage4.1.2 ca
SRR5341216 HR-TB lineage3;lineage4.1.2 in
SRR1187196 Sensitive lineage4.1.2 ca
SRR1187297 Sensitive lineage4.1.2 ca
SRR9588612 Sensitive lineage4.1.2 None
SRR1188137 Sensitive lineage4.1.2 ca
SRR1188121 Sensitive lineage4.1.2 ca
SRR1188188 Sensitive lineage4.1.2 ca
SRR1187085 Sensitive lineage4.1.2 ca
SRR1188341 Sensitive lineage4.1.2 ca
SRR9588578 Sensitive lineage4.1.2 None
SRR9588592 Sensitive lineage4.1.2 None
SRR1188082 Sensitive lineage4.1.2 ca
SRR1188220 Sensitive lineage4.1.2 ca
SRR1191546 Sensitive lineage4.1.2 ca
SRR9588569 Sensitive lineage4.1.2 None
SRR1640347 Sensitive lineage4.1.2 ca
SRR9588568 Sensitive lineage4.1.2 None
SRR1640242 Sensitive lineage4.1.2 ca
SRR1640287 Sensitive lineage4.1.2 ca
SRR21690301 Sensitive lineage1.2.2.1 None
SRR1640565 Sensitive lineage4.1.2 ca
SRR9588553 Sensitive lineage4.1.2 None
SRR9588608 Sensitive lineage4.1.2 None
ERR11044903 Sensitive lineage1.2.2.1 None
ERR11049977 Sensitive lineage1.2.2.1 None
SRR1188459 Sensitive lineage4.1.2 None
SRR1191666 Sensitive lineage4.1.2 ca
SRR9588600 Sensitive lineage4.1.2 None
SRR1187630 Sensitive lineage4.1.2 ca
SRR1200251 Sensitive lineage4.1.2 ca
SRR1640542 Sensitive lineage4.1.2 ca
ERR11049217 Sensitive lineage1.2.2.1 None
ERR11044899 Sensitive lineage2.2.1 None
SRR1187183 HR-TB lineage4.1.2 ca
SRR9588564 Sensitive lineage4.1.2 None
SRR1190473 Sensitive lineage4.1.2 ca
SRR1640326 Sensitive lineage4.1.2 ca
SRR9588597 Sensitive lineage4.1.2 None
SRR1187001 Sensitive lineage4.1.2 ca
SRR1188183 Sensitive lineage4.1.2 ca
SRR1188487 Sensitive lineage4.1.2 ca
SRR9588596 Sensitive lineage4.1.2 None
SRR9588610 Sensitive lineage4.1.2 None
SRR1187011 Sensitive lineage4.1.2 ca
SRR1187295 Sensitive lineage4.1.2 ca
SRR1187619 Sensitive lineage4.1.2 ca
SRR1640250 Sensitive lineage4.1.2 ca
SRR1187082 Sensitive lineage4.1.2 ca
SRR1640567 Sensitive lineage4.1.2 ca
SRR1367198 Sensitive lineage4.1.2 ca
SRR1188284 Sensitive lineage4.1.2 ca
SRR9588602 Sensitive lineage4.1.2 None
ERR4829362 Sensitive lineage1.2.2.1 None
SRR1640342 Sensitive lineage4.1.2 ca
SRR9588571 Sensitive lineage4.1.2 None
SRR1191727 Sensitive lineage4.1.2 ca
SRR9588599 Sensitive lineage4.1.2 None
SRR1188127 Sensitive lineage4.1.2 ca
SRR1188138 Sensitive lineage4.1.2 ca
SRR1640343 Sensitive lineage4.1.2 ca
SRR1640294 Sensitive lineage4.1.2 ca
SRR1188130 Sensitive lineage4.1.2 ca
SRR1188084 Sensitive lineage4.1.2 ca
SRR9588575 Sensitive lineage4.1.2 None
SRR1187380 Sensitive lineage4.1.2 ca
SRR9588579 Sensitive lineage4.1.2 None
SRR1188131 Sensitive lineage4.1.2 ca
SRR1191547 Sensitive lineage4.1.2 ca
SRR1640289 Sensitive lineage4.1.2 None
SRR1187620 Sensitive lineage4.1.2 ca
SRR1640540 Sensitive lineage4.1.2 ca
SRR9588582 Sensitive lineage4.1.2 None
ERR11044428 Sensitive lineage1.2.2.1 None
SRR1187089 Sensitive lineage4.1.2 ca
SRR1187627 Sensitive lineage4.1.2 ca
SRR1188343 Sensitive lineage4.1.2 ca
SRR1640266 Sensitive lineage4.1.2 ca
SRR1640321 Sensitive lineage4.1.2 None
SRR1640714 Sensitive lineage4.1.2 None
SRR1640551 Sensitive lineage4.1.2 ca
SRR1640562 Sensitive lineage4.1.2 ca
SRR9588590 Sensitive lineage4.1.2 None
SRR1187088 Sensitive lineage4.1.2 ca
SRR1190477 Sensitive lineage4.1.2 ca
SRR9588554 Sensitive lineage4.1.2 None
SRR1190442 Sensitive lineage4.1.2 ca