Rv3854c - c.-546G>A
Drug resistance types
74 Sensitive
0 RR-TB
21 HR-TB
13 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 109 |
| lineage3.1.2.1;lineage4.3.4.2 | 2 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 112 |
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR987778 | MDR-TB | lineage4.3.4.2 | None | ERR3276232 | Sensitive | lineage4.3.4.2 | nl | SRR12634541 | Other | lineage4.3.4.2 | None | ERR176708 | HR-TB | lineage4.3.4.2 | mw | ERR9285863 | Sensitive | lineage4.3.4.2 | None | SRR21732336 | Sensitive | lineage4.3.4.2 | None | ERR7801182 | Sensitive | lineage4.3.4.2 | None | SRR7535041 | HR-TB | lineage4.3.4.2 | None | ERR9285967 | Sensitive | lineage4.3.4.2 | None | SRR1049750 | HR-TB | lineage4.3.4.2 | None | SRR22249939 | Sensitive | lineage4.3.4.2 | None | ERR9286108 | Sensitive | lineage4.3.4.2 | None | ERR6358857 | MDR-TB | lineage4.3.4.2 | None | ERR038736 | MDR-TB | lineage4.3.4.2 | ug | ERR9286062 | Sensitive | lineage4.3.4.2 | None | ERR9285948 | Sensitive | lineage4.3.4.2 | None | ERR2446081 | Sensitive | lineage4.3.4.2 | nl | ERR9286082 | Sensitive | lineage4.3.4.2 | None | ERR987771 | HR-TB | lineage4.3.4.2 | None | ERR2517339 | Sensitive | lineage4.3.4.2 | nl | ERR9286059 | Sensitive | lineage4.3.4.2 | None | SRR1049611 | MDR-TB | lineage4.3.4.2 | None | ERR405202 | Sensitive | lineage4.3.4.2 | None | SRR1173157 | HR-TB | lineage4.3.4.2 | None | ERR7801288 | Sensitive | lineage4.3.4.2 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | ERR7801247 | Sensitive | lineage4.3.4.2 | None | SRR21690767 | Sensitive | lineage4.3.4.2 | None | SAMN02567674 | HR-TB | lineage4.3.4.2 | ug | ERR9286060 | Sensitive | lineage4.3.4.2 | None | ERR4819253 | Sensitive | lineage4.3.4.2 | gb | ERR9286145 | Sensitive | lineage4.3.4.2 | None | SRR1049610 | MDR-TB | lineage4.3.4.2 | None | ERR7801248 | Sensitive | lineage4.3.4.2 | None | ERR6358856 | MDR-TB | lineage4.3.4.2 | None | ERR3275436 | Sensitive | lineage4.3.4.2 | nl | ERR11044099 | Sensitive | lineage4.3.4.2 | None | SRR19428544 | Sensitive | lineage4.3.4.2 | None | SRR1140702 | MDR-TB | lineage4.3.4.2 | None | ERR9285958 | Sensitive | lineage4.3.4.2 | None | SRR1174278 | HR-TB | lineage4.3.4.2 | None | ERR7801294 | Sensitive | lineage4.3.4.2 | None | ERR9285936 | Sensitive | lineage4.3.4.2 | None | ERR987699 | HR-TB | lineage4.3.4.2 | None | SRR1140681 | MDR-TB | lineage3.1.2.1;lineage4.3.4.2 | None | SRR7535043 | HR-TB | lineage4.3.4.2 | None | ERR7801183 | Sensitive | lineage4.3.4.2 | None | ERR9286024 | Sensitive | lineage4.3.4.2 | None | ERR4821860 | Sensitive | lineage4.3.4.2 | gb | ERR3275968 | Sensitive | lineage4.3.4.2 | nl | ERR9285992 | Sensitive | lineage4.3.4.2 | None | ERR9285952 | Sensitive | lineage4.3.4.2 | None | ERR9285984 | Sensitive | lineage4.3.4.2 | None | ERR552828 | Sensitive | lineage4.3.4.2 | de | ERR4820923 | Other | lineage4.3.4.2 | None | ERR9286113 | Sensitive | lineage4.3.4.2 | None | ERR2512485 | Sensitive | lineage4.3.4.2 | gb | ERR3275598 | Sensitive | lineage4.3.4.2 | nl | ERR7801173 | Sensitive | lineage4.3.4.2 | None | ERR7801249 | Sensitive | lineage4.3.4.2 | None | SRR21691058 | Sensitive | lineage4.3.4.2 | None | ERR9285954 | Sensitive | lineage4.3.4.2 | None | ERR9285955 | Sensitive | lineage4.3.4.2 | None | SRR19428627 | Other | lineage4.3.4.2 | None | ERR9285905 | Sensitive | lineage4.3.4.2 | None | SAMN02381050 | HR-TB | lineage4.3.4.2 | ug | ERR4818728 | Sensitive | lineage4.3.4.2 | None | SRR7535036 | HR-TB | lineage4.3.4.2 | None | SRR12634612 | Sensitive | lineage4.3.4.2 | None | SRR1062893 | MDR-TB | lineage4.3.4.2 | None | SRR21732204 | Sensitive | lineage4.3.4.2 | None | SRR21677068 | HR-TB | lineage3.1.2.1 | None | SRR1062940 | HR-TB | lineage4.3.4.2 | None | ERR9286021 | Sensitive | lineage4.3.4.2 | None | SRR28045631 | Sensitive | lineage4.3.4.2 | None | ERR7801327 | Sensitive | lineage4.3.4.2 | None | ERR9286030 | Sensitive | lineage4.3.4.2 | None | SRR7068975 | Sensitive | lineage4.3.4.2 | None | ERR405189 | Sensitive | lineage4.3.4.2 | None | ERR987754 | MDR-TB | lineage4.3.4.2 | None | ERR1193812 | Sensitive | lineage4.3.4.2 | ke | SRR1140638 | HR-TB | lineage4.3.4.2 | None | ERR1193675 | HR-TB | lineage4.3.4.2 | ug | ERR11489043 | MDR-TB | lineage4.3.4.2 | None | ERR987734 | HR-TB | lineage4.3.4.2 | None | SRR12634611 | Other | lineage4.3.4.2 | None | ERR9285864 | Sensitive | lineage4.3.4.2 | None | ERR9286149 | Sensitive | lineage4.3.4.2 | None | ERR9285947 | Sensitive | lineage4.3.4.2 | None | ERR9286151 | Sensitive | lineage4.3.4.2 | None | ERR9285873 | Sensitive | lineage4.3.4.2 | None | SRR7070489 | Sensitive | lineage4.3.4.2 | None | SRR1049749 | HR-TB | lineage4.3.4.2 | None | ERR4815463 | Sensitive | lineage4.3.4.2 | gb | SRR27450337 | Sensitive | lineage4.3.4.2 | None | SRR7535042 | HR-TB | lineage4.3.4.2 | None | SRR1062883 | MDR-TB | lineage3.1.2.1;lineage4.3.4.2 | None | ERR7801256 | Sensitive | lineage4.3.4.2 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | ERR2512424 | Sensitive | lineage4.3.4.2 | gb | ERR7801174 | Sensitive | lineage4.3.4.2 | None | ERR4822112 | Sensitive | lineage4.3.4.2 | gb | SAMN02381003 | MDR-TB | lineage4.3.4.2 | ug | ERR7801181 | Sensitive | lineage4.3.4.2 | None | SRR7535062 | HR-TB | lineage4.3.4.2 | None | SRR12634637 | HR-TB | lineage4.3.4.2 | None | ERR9285839 | Sensitive | lineage4.3.4.2 | None | SRR19428613 | Sensitive | lineage4.3.4.2 | None | SRR21732242 | Sensitive | lineage4.3.4.2 | None | ERR245686 | Sensitive | lineage4.3.4.2 | mw | ERR2446187 | Sensitive | lineage4.3.4.2 | nl | ERR11775884 | Sensitive | lineage4.3.4.2 | None |
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