Rv3854c - c.-546G>A


Drug resistance types
71 Sensitive 0 RR-TB 22 HR-TB 13 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 3 Other
lineage Counts
lineage Count
1
lineage4.3.4 2
lineage4.3.4.2 103
lineage3.1.2.1 1
lineage4.3.4.2;lineage3.1.2.1 2
spoligotype Counts
spoligotype Count
None 109
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR19428544 Sensitive None
SRR19428612 Sensitive lineage4.3.4 None
SRR19428627 Sensitive lineage4.3.4.2 None
SRR19428613 Sensitive lineage4.3.4.2 None
SRR21677068 HR-TB lineage3.1.2.1 None
SRR21732242 Sensitive lineage4.3.4.2 None
SRR21732336 Sensitive lineage4.3.4.2 None
ERR245686 Sensitive lineage4.3.4.2 mw
SRR27450337 Sensitive lineage4.3.4.2 None
ERR3275598 Sensitive lineage4.3.4.2 nl
ERR176708 HR-TB lineage4.3.4.2 mw
ERR3275436 Sensitive lineage4.3.4.2 nl
ERR1193812 Sensitive lineage4.3.4.2 ke
ERR3275968 Sensitive lineage4.3.4.2 nl
ERR4818728 Sensitive lineage4.3.4.2 None
ERR3276232 Sensitive lineage4.3.4.2 nl
ERR038736 MDR-TB lineage4.3.4.2 ug
ERR552828 Sensitive lineage4.3.4.2 de
SAMN02381003 MDR-TB lineage4.3.4.2 ug
ERR2517339 Sensitive lineage4.3.4.2 nl
SAMN02381050 HR-TB lineage4.3.4.2 ug
SAMN02567674 HR-TB lineage4.3.4.2 ug
ERR2446081 Sensitive lineage4.3.4.2 nl
ERR2446187 Sensitive lineage4.3.4.2 nl
ERR1193675 HR-TB lineage4.3.4.2 ug
ERR4820923 Other lineage4.3.4.2 None
ERR4815463 Sensitive lineage4.3.4.2 gb
SRR7535036 HR-TB lineage4.3.4.2 None
SRR7535041 HR-TB lineage4.3.4.2 None
ERR2512485 Sensitive lineage4.3.4.2 gb
SRR7535042 HR-TB lineage4.3.4.2 None
SRR7535043 HR-TB lineage4.3.4.2 None
ERR4819253 Sensitive lineage4.3.4.2 gb
ERR11044099 Sensitive lineage4.3.4.2 None
ERR4821860 Sensitive lineage4.3.4.2 gb
SRR7535062 HR-TB lineage4.3.4.2 None
ERR11489043 MDR-TB lineage4.3.4.2 None
ERR4822112 Sensitive lineage4.3.4.2 gb
ERR405202 Sensitive lineage4.3.4.2 None
ERR405189 Sensitive lineage4.3.4.2 None
ERR2512424 Sensitive lineage4.3.4.2 gb
ERR6358857 MDR-TB lineage4.3.4.2 None
ERR6358856 MDR-TB lineage4.3.4.2 None
ERR7801181 Sensitive lineage4.3.4.2 None
ERR773795 Sensitive lineage4.3.4.2 None
ERR7801182 Sensitive lineage4.3.4.2 None
ERR7801173 Sensitive lineage4.3.4.2 None
ERR7801247 Sensitive lineage4.3.4.2 None
ERR7801174 Sensitive lineage4.3.4.2 None
ERR7801249 Sensitive lineage4.3.4.2 None
ERR7801183 Other lineage4.3.4.2 None
ERR9285873 Sensitive lineage4.3.4.2 None
ERR7801256 Sensitive lineage4.3.4.2 None
ERR7801294 Sensitive lineage4.3.4.2 None
ERR7801327 Sensitive lineage4.3.4.2 None
ERR9285863 Sensitive lineage4.3.4.2 None
ERR9285864 Sensitive lineage4.3.4.2 None
ERR7801248 Other lineage4.3.4.2 None
ERR7801288 Sensitive lineage4.3.4.2 None
SRR21732204 Sensitive lineage4.3.4.2 None
SRR22249939 Sensitive lineage4.3.4.2 None
ERR9285839 Sensitive lineage4.3.4.2 None
ERR9285954 Sensitive lineage4.3.4.2 None
ERR9285936 Sensitive lineage4.3.4.2 None
ERR9285905 Sensitive lineage4.3.4.2 None
ERR9285958 Sensitive lineage4.3.4.2 None
ERR9285955 Sensitive lineage4.3.4.2 None
ERR9285947 Sensitive lineage4.3.4.2 None
ERR9285984 Sensitive lineage4.3.4.2 None
ERR9285948 Sensitive lineage4.3.4.2 None
ERR9285992 Sensitive lineage4.3.4.2 None
ERR9285952 Sensitive lineage4.3.4.2 None
ERR9285967 Sensitive lineage4.3.4.2 None
ERR9286030 Sensitive lineage4.3.4.2 None
ERR9286021 Sensitive lineage4.3.4.2 None
ERR9286024 Sensitive lineage4.3.4.2 None
ERR9286062 Sensitive lineage4.3.4.2 None
ERR9286059 Sensitive lineage4.3.4.2 None
ERR9286060 Sensitive lineage4.3.4.2 None
ERR9286082 Sensitive lineage4.3.4.2 None
ERR9286113 Sensitive lineage4.3.4.2 None
ERR9286108 Sensitive lineage4.3.4.2 None
ERR9286149 Sensitive lineage4.3.4.2 None
ERR9286145 Sensitive lineage4.3.4.2 None
ERR9286118 Sensitive lineage4.3.4.2 None
ERR987754 MDR-TB lineage4.3.4.2 None
ERR987695 HR-TB lineage4.3.4.2 None
ERR9286151 Sensitive lineage4.3.4.2 None
ERR987699 HR-TB lineage4.3.4.2 None
ERR987698 HR-TB lineage4.3.4.2 None
ERR987734 HR-TB lineage4.3.4.2 None
SRR1049611 MDR-TB lineage4.3.4.2 None
ERR987778 MDR-TB lineage4.3.4.2 None
ERR987771 HR-TB lineage4.3.4.2 None
SRR1049610 MDR-TB lineage4.3.4.2 None
SRR1049749 HR-TB lineage4.3.4.2 None
SRR1140681 MDR-TB lineage4.3.4.2;lineage3.1.2.1 None
SRR1062883 MDR-TB lineage4.3.4.2;lineage3.1.2.1 None
SRR1062940 HR-TB lineage4.3.4.2 None
SRR1049750 HR-TB lineage4.3.4.2 None
SRR1062893 MDR-TB lineage4.3.4.2 None
SRR1140638 HR-TB lineage4.3.4.2 None
SRR1140702 MDR-TB lineage4.3.4.2 None
SRR12634611 Sensitive lineage4.3.4.2 None
SRR12634637 HR-TB lineage4.3.4.2 None
SRR1173157 HR-TB lineage4.3.4.2 None
SRR1174278 HR-TB lineage4.3.4.2 None
SRR12634541 Sensitive lineage4.3.4 None
SRR12634612 Sensitive lineage4.3.4.2 None