Rv3854c - c.-779T>G
Drug resistance types
128 Sensitive
3 RR-TB
16 HR-TB
17 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 159 |
| lineage3 | 2 |
| lineage4.8;lineage4.4.1.1 | 1 |
| lineage4.6.1.2;lineage4.4.1.1 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.9 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 169 |
Geographic prevalence
Country level data for this variant is available for 26 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046463 | Other | lineage4.4.1.1 | None | ERR4829303 | Sensitive | lineage4.4.1.1 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6046746 | Sensitive | lineage4.4.1.1 | gb | ERR294271 | Sensitive | lineage4.4.1.1 | None | ERR4831162 | Sensitive | lineage4.4.1.1 | de | SAMN02381018 | HR-TB | lineage4.4.1.1 | ug | ERR038754 | MDR-TB | lineage4.4.1.1 | ug | SRR7535056 | Sensitive | lineage4.4.1.1 | None | SRR7131079 | Sensitive | lineage4.4.1.1 | None | ERR040128 | MDR-TB | lineage4.4.1.1 | ug | ERR10465944 | Sensitive | lineage4.4.1.1 | None | ERR040124 | MDR-TB | lineage4.4.1.1 | ug | ERR040130 | MDR-TB | lineage4.4.1.1 | ug | ERR11049160 | Sensitive | lineage4.4.1.1 | None | ERR6358975 | Sensitive | lineage4.4.1.1 | None | ERR4596901 | MDR-TB | lineage4.4.1.1 | None | ERR6359026 | RR-TB | lineage4.4.1.1 | None | ERR6359105 | Sensitive | lineage4.4.1.1 | None | ERR7801208 | Sensitive | lineage4.4.1.1 | None | ERR7801209 | Sensitive | lineage4.4.1.1 | None | ERR7801210 | Sensitive | lineage4.4.1.1 | None | ERR7801324 | Sensitive | lineage4.4.1.1 | None | ERR9124955 | Sensitive | lineage4.4.1.1 | None | ERR7801318 | Sensitive | lineage4.4.1.1 | None | ERR9125049 | Sensitive | lineage4.4.1.1 | None | ERR9125025 | Sensitive | lineage4.4.1.1 | None | ERR9125117 | Sensitive | lineage4.4.1.1 | None | ERR9125185 | Sensitive | lineage4.4.1.1 | None | ERR9125642 | Sensitive | lineage3 | None | ERR9125545 | Sensitive | lineage4.4.1.1 | None | ERR9125526 | Sensitive | lineage4.4.1.1 | None | ERR9285772 | Sensitive | lineage4.4.1.1 | None | ERR9285792 | Sensitive | lineage4.4.1.1 | None | ERR9285776 | Sensitive | lineage4.4.1.1 | None | ERR9285784 | Sensitive | lineage4.4.1.1 | None | ERR9285781 | Sensitive | lineage4.4.1.1 | None | ERR9285805 | Sensitive | lineage4.4.1.1 | None | ERR9285802 | Sensitive | lineage4.8;lineage4.4.1.1 | None | ERR9285800 | Sensitive | lineage4.4.1.1 | None | ERR9285814 | Sensitive | lineage4.4.1.1 | None | ERR9285789 | Sensitive | lineage4.4.1.1 | None | ERR9285850 | Sensitive | lineage4.4.1.1 | None | ERR9285821 | Sensitive | lineage4.4.1.1 | None | ERR9285823 | Sensitive | lineage4.4.1.1 | None | ERR9285846 | Sensitive | lineage4.4.1.1 | None | ERR9285810 | Sensitive | lineage4.4.1.1 | None | ERR9285847 | Sensitive | lineage4.4.1.1 | None | ERR9285886 | Sensitive | lineage4.4.1.1 | None | ERR9285885 | Sensitive | lineage4.4.1.1 | None | ERR9285878 | Sensitive | lineage4.4.1.1 | None | ERR9285888 | Sensitive | lineage4.4.1.1 | None | ERR9285884 | Sensitive | lineage4.4.1.1 | None | ERR9285908 | Sensitive | lineage4.4.1.1 | None | ERR9285887 | Sensitive | lineage4.4.1.1 | None | ERR9285909 | Sensitive | lineage4.4.1.1 | None | ERR9285922 | Sensitive | lineage4.4.1.1 | None | ERR9285918 | Sensitive | lineage4.4.1.1 | None | ERR9285926 | Sensitive | lineage4.4.1.1 | None | ERR9285914 | Sensitive | lineage4.4.1.1 | None | ERR9285940 | Sensitive | lineage4.4.1.1 | None | ERR9285933 | Sensitive | lineage4.4.1.1 | None | ERR9285929 | Sensitive | lineage4.4.1.1 | None | ERR9285963 | Sensitive | lineage4.4.1.1 | None | ERR9285966 | Sensitive | lineage4.4.1.1 | None | ERR9286080 | Sensitive | lineage4.4.1.1 | None | ERR9285975 | Sensitive | lineage4.4.1.1 | None | ERR9285987 | Sensitive | lineage4.4.1.1 | None | ERR9286035 | Sensitive | lineage4.4.1.1 | None | ERR9286081 | Sensitive | lineage4.4.1.1 | None | ERR9286096 | Sensitive | lineage4.4.1.1 | None | ERR9286111 | Sensitive | lineage4.4.1.1 | None | ERR9286128 | Sensitive | lineage4.4.1.1 | None | ERR9285970 | Sensitive | lineage4.4.1.1 | None | ERR9286098 | Sensitive | lineage4.4.1.1 | None | ERR9286127 | Sensitive | lineage4.4.1.1 | None | ERR9286153 | Sensitive | lineage4.4.1.1 | None | ERR9286148 | Sensitive | lineage4.4.1.1 | None | ERR9286136 | Sensitive | lineage4.4.1.1 | None | ERR9286152 | Sensitive | lineage4.4.1.1 | None | ERR987784 | HR-TB | lineage4.4.1.1 | None | ERR987717 | HR-TB | lineage4.4.1.1 | None | ERR987732 | HR-TB | lineage4.4.1.1 | None | ERR987716 | Sensitive | lineage4.4.1.1 | None | ERR987718 | Sensitive | lineage4.4.1.1 | None | ERR987728 | HR-TB | lineage4.4.1.1 | None | ERR990548 | Sensitive | lineage4.4.1.1 | None | ERR990533 | Sensitive | lineage4.4.1.1 | None | ERR990547 | Sensitive | lineage4.4.1.1 | None | ERR990534 | Sensitive | lineage4.4.1.1 | None | SRR1049564 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | ERR990556 | Sensitive | lineage4.4.1.1 | None | SRR1049563 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | ERR990555 | Sensitive | lineage4.4.1.1 | None | SRR1049605 | Sensitive | lineage4.4.1.1 | None | SRR1049575 | Sensitive | lineage4.4.1.1 | None | SRR1049576 | Sensitive | lineage4.4.1.1 | None | SRR1049622 | MDR-TB | lineage4.4.1.1 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SRR1049606 | Sensitive | lineage4.4.1.1 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | SRR1049629 | MDR-TB | lineage4.4.1.1 | None | SRR1049742 | Sensitive | lineage4.4.1.1 | None | SRR1049641 | HR-TB | lineage4.4.1.1 | None | SRR1049642 | HR-TB | lineage4.4.1.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049741 | Sensitive | lineage4.4.1.1 | None | SRR1062908 | HR-TB | lineage4.4.1.1 | None | SRR1062877 | Sensitive | lineage4.4.1.1 | None | SRR1062897 | MDR-TB | lineage4.4.1.1 | None | SRR1062873 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1062891 | Sensitive | lineage4.4.1.1 | None | SRR1062902 | MDR-TB | lineage4.4.1.1 | None | SRR1062936 | Sensitive | lineage4.4.1.1 | None | SRR1140579 | Sensitive | lineage4.4.1.1 | None | SRR11342699 | Sensitive | lineage4.4.1.1 | None | SRR1140683 | HR-TB | lineage4.4.1.1 | None | SRR1140656 | Sensitive | lineage4.4.1.1 | None | SRR1140729 | MDR-TB | lineage4.4.1.1 | None | SRR1140691 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1140737 | Sensitive | lineage4.4.1.1 | None | SRR1140751 | MDR-TB | lineage4.4.1.1 | None | SRR1173134 | HR-TB | lineage4.4.1.1 | None | SRR12634549 | Sensitive | lineage4.4.1.1 | None | SRR1173249 | Sensitive | lineage4.4.1.1 | None | SRR1173769 | Sensitive | lineage4.4.1.1 | None | SRR1173872 | HR-TB | lineage4.4.1.1 | None | SRR1173720 | Other | lineage4.9 | None | SRR16058428 | Sensitive | lineage3 | None | SRR12634581 | RR-TB | lineage4.4.1.1 | None | SRR16058068 | Sensitive | lineage4.4.1.1 | None | SRR16058206 | Sensitive | lineage4.4.1.1 | None | SRR16058243 | Sensitive | lineage4.4.1.1 | None | SRR12634573 | RR-TB | lineage4.4.1.1 | None | SRR16058506 | Sensitive | lineage4.4.1.1 | None | SRR16058582 | Sensitive | lineage4.4.1.1 | None | SRR16058561 | Sensitive | lineage4.4.1.1 | None | ERR11050696 | Sensitive | lineage4.4.1.1 | None | SRR16058597 | Sensitive | lineage4.4.1.1 | None | SRR2101059 | Sensitive | lineage4.4.1.1 | None | SRR18213866 | Sensitive | lineage4.4.1.1 | None | ERR11082770 | Sensitive | lineage4.4.1.1 | None | ERR11068106 | Sensitive | lineage4.4.1.1 | None | ERR553158 | Sensitive | lineage4.4.1.1 | de | ERR4816485 | Sensitive | lineage4.4.1.1 | None | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | SAMN02567661 | Sensitive | lineage4.4.1.1 | ug | ERR3276165 | Sensitive | lineage4.4.1.1 | nl | ERR2027247 | Sensitive | lineage4.4.1.1 | None | SAMN02381001 | Sensitive | lineage4.4.1.1 | ug | ERR2446587 | Sensitive | lineage4.4.1.1 | nl | ERR2512950 | Sensitive | lineage4.4.1.1 | gb | SRR3732696 | Sensitive | lineage4.4.1.1 | None | ERR2512548 | Other | lineage4.4.1.1 | gb | SAMN02567679 | HR-TB | lineage4.4.1.1 | ug | SAMN02381046 | Sensitive | lineage4.4.1.1 | ug | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR2503434 | Sensitive | lineage4.4.1.1 | fi | ERR3275620 | Sensitive | lineage4.4.1.1 | nl | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819134 | Sensitive | lineage4.4.1.1 | gb | ERR2514626 | Sensitive | lineage4.4.1.1 | gb | ERR2514212 | Sensitive | lineage4.4.1.1 | gb | ERR4820421 | MDR-TB | lineage1.2.1.2.1 | gb | SAMN02380988 | Sensitive | lineage4.4.1.1 | ug | ERR2517241 | Sensitive | lineage4.4.1.1 | nl | SRR5535721 | Sensitive | lineage4.4.1.1 | None | SRR6045846 | Other | lineage4.4.1.1 | None | SAMN02381012 | MDR-TB | lineage4.4.1.1 | None |
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