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SRA data
Rv3854c
- c.449_481delGATTCGCCGGCTCGGAGGATTTCGTCGGGCCGA
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
0 MDR-TB
67 Pre-XDR-TB
4 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
70
lineage2.2.1;lineage3;lineage4
1
lineage2.2.1;lineage4
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
72
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR13260947
Pre-XDR-TB
lineage2.2.1
None
ERR13260951
Pre-XDR-TB
lineage2.2.1
None
ERR13261253
Pre-XDR-TB
lineage2.2.1
None
ERR13261972
Pre-XDR-TB
lineage2.2.1
None
ERR13262104
Pre-XDR-TB
lineage2.2.1
None
ERR13266660
Pre-XDR-TB
lineage2.2.1
None
ERR13267036
Pre-XDR-TB
lineage2.2.1
None
ERR4796264
Pre-XDR-TB
lineage2.2.1
None
ERR4796264
Pre-XDR-TB
lineage2.2.1
None
ERR4796427
Pre-XDR-TB
lineage2.2.1
None
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