Rv3854c - c.449_481delGATTCGCCGGCTCGGAGGATTTCGTCGGGCCGA
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
0 MDR-TB
67 Pre-XDR-TB
4 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage2.2.1 | 70 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25827355 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None | ERR4799715 | Pre-XDR-TB | lineage2.2.1 | in | ERR13262104 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827545 | XDR-TB | lineage2.2.1 | None | SRR28351571 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351256 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827430 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR13266660 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797740 | Pre-XDR-TB | lineage2.2.1 | in | ERR7162976 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796959 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827815 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827388 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799192 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797776 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800426 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827546 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796945 | Pre-XDR-TB | lineage2.2.1 | in | ERR13260951 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797304 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800574 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800300 | Pre-XDR-TB | lineage2.2.1 | in | ERR13261253 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799351 | Pre-XDR-TB | lineage2.2.1 | in | ERR13267036 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800475 | XDR-TB | lineage2.2.1 | in | ERR4799453 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798073 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799899 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798733 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827664 | XDR-TB | lineage2.2.1 | None | ERR4797955 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796264 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796264 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796892 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797876 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799044 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798991 | Pre-XDR-TB | lineage2.2.1 | in | SRR15014685 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796897 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799957 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800063 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799517 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827515 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796789 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797582 | Pre-XDR-TB | lineage2.2.1 | in | ERR13261972 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800578 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796738 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796438 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797303 | Pre-XDR-TB | lineage2.2.1 | in | SRR22175221 | XDR-TB | lineage2.2.1 | None | ERR4797660 | Pre-XDR-TB | lineage2.2.1 | in | SRR28351254 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797783 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827476 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800555 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799515 | Pre-XDR-TB | lineage2.2.1 | in | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR4796427 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799298 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798079 | Pre-XDR-TB | lineage2.2.1 | in | SRR29772637 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772637 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798499 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797485 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796851 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798785 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800071 | Pre-XDR-TB | lineage2.2.1 | in | ERR13260947 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045456 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796471 | Pre-XDR-TB | lineage2.2.1 | in |
|---|
