Rv3854c - c.639_640delGT
Drug resistance types
0 Sensitive
0 RR-TB
12 HR-TB
42 MDR-TB
23 Pre-XDR-TB
1 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 89 |
| lineage2.2.1;lineage1.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 90 |
Geographic prevalence
Country level data for this variant is available for 83 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7517778 | MDR-TB | lineage2.2.1 | th | SRR5709886 | Pre-XDR-TB | lineage2.2.1 | th | ERR718462 | HR-TB | lineage2.2.1 | th | SRR5709889 | Pre-XDR-TB | lineage2.2.1 | th | SAMEA2535154 | HR-TB | lineage2.2.1 | None | ERR4798306 | Other | lineage2.2.1 | in | SRR5709751 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709965 | MDR-TB | lineage2.2.1 | th | SRR5709961 | MDR-TB | lineage2.2.1 | th | SRR5710009 | MDR-TB | lineage2.2.1 | th | SRR5709894 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709812 | MDR-TB | lineage2.2.1 | th | ERR2513260 | Other | lineage2.2.1 | gb | SRR5709867 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709877 | MDR-TB | lineage2.2.1 | th | ERR718314 | HR-TB | lineage2.2.1 | th | SRR5709939 | HR-TB | lineage2.2.1 | th | ERR718521 | MDR-TB | lineage2.2.1 | th | ERR752228 | Other | lineage2.2.1 | th | SRR5709806 | MDR-TB | lineage2.2.1 | th | SAMEA2534474 | Other | lineage2.2.1 | th | ERR752225 | MDR-TB | lineage2.2.1 | th | SRR2100367 | MDR-TB | lineage2.2.1 | None | SRR5709935 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709952 | MDR-TB | lineage2.2.1 | th | SRR5710025 | MDR-TB | lineage2.2.1 | th | ERR4821736 | HR-TB | lineage2.2.1 | gb | SRR5710011 | Pre-XDR-TB | lineage2.2.1 | th | SRR5837707 | MDR-TB | lineage2.2.1 | th | SRR5709927 | MDR-TB | lineage2.2.1 | th | SRR5709879 | MDR-TB | lineage2.2.1 | th | SRR5709811 | MDR-TB | lineage2.2.1 | th | SRR5709809 | MDR-TB | lineage2.2.1 | th | ERR2514931 | Other | lineage2.2.1 | gb | SRR5710007 | MDR-TB | lineage2.2.1 | th | ERR4800488 | Other | lineage2.2.1 | in | SRR5709901 | MDR-TB | lineage2.2.1 | th | SRR7517777 | MDR-TB | lineage2.2.1 | th | SRR5709825 | Pre-XDR-TB | lineage2.2.1 | th | SRR2100390 | MDR-TB | lineage2.2.1 | None | ERR2446135 | Other | lineage2.2.1 | nl | ERR718266 | Other | lineage2.2.1 | th | SRR5709931 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709797 | Pre-XDR-TB | lineage2.2.1 | th | ERR751742 | Other | lineage2.2.1 | th | SRR5709853 | HR-TB | lineage2.2.1 | th | SRR5709844 | MDR-TB | lineage2.2.1 | th | ERR3275639 | Other | lineage2.2.1 | nl | SRR5709888 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709773 | MDR-TB | lineage2.2.1 | th | SRR5709808 | MDR-TB | lineage2.2.1 | th | SRR5837709 | Pre-XDR-TB | lineage2.2.1 | th | SRR3055243 | MDR-TB | lineage2.2.1 | None | ERR751751 | MDR-TB | lineage2.2.1 | th | SRR5709753 | MDR-TB | lineage2.2.1 | th | SRR5709769 | MDR-TB | lineage2.2.1 | th | ERR718493 | MDR-TB | lineage2.2.1 | th | SRR5709836 | HR-TB | lineage2.2.1 | th | SRR5709754 | Pre-XDR-TB | lineage2.2.1 | th | SAMN02414989 | Pre-XDR-TB | lineage2.2.1 | se | ERR751775 | HR-TB | lineage2.2.1 | th | ERR4797307 | Other | lineage2.2.1 | in | SRR5709875 | MDR-TB | lineage2.2.1 | th | SRR5709885 | Pre-XDR-TB | lineage2.2.1 | th | SRR5710010 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709918 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709951 | MDR-TB | lineage2.2.1 | th | SRR5709815 | Pre-XDR-TB | lineage2.2.1 | th | ERR2514679 | HR-TB | lineage2.2.1 | gb | ERR4821221 | HR-TB | lineage2.2.1 | gb | SRR5709967 | MDR-TB | lineage2.2.1 | None | SAMEA2533646 | HR-TB | lineage2.2.1 | None | SRR5709990 | Pre-XDR-TB | lineage2.2.1 | th | ERR751692 | HR-TB | lineage2.2.1 | th | SRR5709807 | MDR-TB | lineage2.2.1 | th | SRR2100335 | MDR-TB | lineage2.2.1 | None | SRR5709805 | MDR-TB | lineage2.2.1 | th | SRR5709756 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709775 | MDR-TB | lineage2.2.1 | th | SRR5709930 | MDR-TB | lineage2.2.1 | th | SRR5709817 | MDR-TB | lineage2.2.1 | th | ERR718316 | Other | lineage2.2.1 | th | SRR5709993 | Pre-XDR-TB | lineage2.2.1 | th | SRR5837706 | MDR-TB | lineage2.2.1 | th | SRR5709793 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709964 | MDR-TB | lineage2.2.1 | th | SRR5709843 | Pre-XDR-TB | lineage2.2.1 | th | SRR3725012 | MDR-TB | lineage2.2.1 | th | SRR5710023 | XDR-TB | lineage2.2.1 | th | SRR5709818 | MDR-TB | lineage2.2.1;lineage1.2.1.2 | th |
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