TB-Profiler
Home
Upload
SRA data
Rv3854c
- c.639_640delGT
Drug resistance types
0 Sensitive
0 RR-TB
35 HR-TB
196 MDR-TB
80 Pre-XDR-TB
2 XDR-TB
22 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage2.2.1
331
La3;lineage2.2.1
1
lineage1.1.3.3;lineage2.2.1
1
lineage1.2.1.2;lineage2.2.1
1
lineage1.1.1;lineage2.2.1
1
Showing 1 to 5 of 5 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
335
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10465838
HR-TB
lineage2.2.1
None
ERR10465963
HR-TB
lineage2.2.1
None
ERR11043746
Pre-XDR-TB
lineage2.2.1
None
ERR11049209
MDR-TB
lineage2.2.1
None
ERR11068040
HR-TB
lineage2.2.1
None
ERR11081271
MDR-TB
lineage2.2.1
None
ERR11083016
MDR-TB
lineage2.2.1
None
ERR114488
MDR-TB
lineage2.2.1
None
ERR117716
MDR-TB
lineage2.2.1
None
ERR117735
MDR-TB
lineage2.2.1
None
Showing 1 to 10 of 335 entries
Previous
1
2
3
4
5
…
34
Next