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SRA data
Rv3854c
- c.672dupG
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
20 MDR-TB
68 Pre-XDR-TB
4 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.3.3
32
lineage2.2.1
21
lineage4.4.1.1
13
lineage3
8
lineage4.8
8
lineage3.1.2
2
lineage4
2
lineage2.2.1.1
1
lineage1.2.2.2;lineage2.2.1
1
lineage2.2.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
92
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034594
MDR-TB
lineage3
pk
ERR11080892
MDR-TB
lineage3
None
ERR11773713
MDR-TB
lineage4.8
None
ERR12117933
MDR-TB
lineage4.3.3
None
ERR12118042
MDR-TB
lineage4.3.3
None
ERR13261975
Pre-XDR-TB
lineage2.2.1
None
ERR13264983
MDR-TB
lineage2.2.1
None
ERR13266500
Pre-XDR-TB
lineage2.2.1
None
ERR13266504
Pre-XDR-TB
lineage2.2.1
None
ERR13266617
Pre-XDR-TB
lineage2.2.1.1
None
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