Rv3854c - c.672dupG
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
12 MDR-TB
52 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 1 |
| lineage4.3.3 | 24 |
| lineage4.8 | 4 |
| lineage2.2.1 | 13 |
| lineage3.1.2 | 1 |
| lineage3 | 7 |
| lineage4.4.1.1 | 13 |
| lineage2.2.1;lineage1.2.2.2 | 1 |
| lineage4.2.2 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 66 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR751411 | MDR-TB | lineage4 | pe | ERR751459 | MDR-TB | lineage4.3.3 | pe | SRR1166208 | Pre-XDR-TB | lineage4.8 | ro | SAMN02628527 | Pre-XDR-TB | lineage2.2.1 | ir | ERR2653107 | Pre-XDR-TB | lineage4.3.3 | None | SRR5266543 | Pre-XDR-TB | lineage4.3.3 | ru | SRR7341707 | MDR-TB | lineage4.8 | ro | ERR3287678 | MDR-TB | lineage4.3.3 | pe | ERR2516504 | MDR-TB | lineage4.3.3 | pe | ERR2516665 | Pre-XDR-TB | lineage2.2.1 | pe | SRR6257020 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917769 | Pre-XDR-TB | lineage4.3.3 | by | ERR4813201 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4799874 | Pre-XDR-TB | lineage3.1.2 | in | ERR3287451 | MDR-TB | lineage4.3.3 | pe | ERR2510611 | Pre-XDR-TB | lineage3 | pk | SRR9971343 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4024976 | Pre-XDR-TB | lineage4.3.3 | None | SRR833034 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR8698484 | Pre-XDR-TB | lineage4.3.3 | None | SRR833175 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR7592389 | Pre-XDR-TB | lineage4.8 | None | ERR12118042 | MDR-TB | lineage4.3.3 | None | ERR5863694 | Pre-XDR-TB | lineage2.2.1 | None | ERR12117933 | MDR-TB | lineage4.3.3 | None | ERR5863693 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088050 | Pre-XDR-TB | lineage2.2.1 | None | SRR21776297 | Pre-XDR-TB | lineage4.3.3 | None | ERR6865455 | Pre-XDR-TB | lineage4.3.3 | None | ERR688026 | MDR-TB | lineage3 | None | SRR1062836 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1011464 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR10315584 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR11638839 | Pre-XDR-TB | lineage3 | None | SRR1172305 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180392 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1180185 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180314 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1174896 | Pre-XDR-TB | lineage2.2.1 | None | SRR15901696 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181106 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1181217 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1183041 | Pre-XDR-TB | lineage2.2.1 | None | SRR13870376 | Pre-XDR-TB | lineage4.3.3 | None | ERR11080892 | MDR-TB | lineage3 | None | SRR21276952 | MDR-TB | lineage2.2.1 | None | SRR22175197 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207304 | XDR-TB | lineage2.2.1 | None | SRR24466786 | Pre-XDR-TB | lineage4.8 | None | SRR26387460 | Pre-XDR-TB | lineage4.3.3 | None | SRR26387478 | Pre-XDR-TB | lineage4.3.3 | None | SRR26387461 | Pre-XDR-TB | lineage4.3.3 | None | SRR26387476 | Pre-XDR-TB | lineage4.3.3 | None | ERR1034594 | MDR-TB | lineage3 | pk | SRR26387477 | Pre-XDR-TB | lineage4.3.3 | None | SRR25827479 | XDR-TB | lineage2.2.1;lineage1.2.2.2 | None | SRR25827387 | Pre-XDR-TB | lineage3 | None | SRR3105739 | Pre-XDR-TB | lineage4.2.2 | None | SRR26387500 | Pre-XDR-TB | lineage4.3.3 | None | SRR26387501 | Pre-XDR-TB | lineage4.3.3 | None | SRR25207263 | Pre-XDR-TB | lineage2.2.2 | None | SRR25827419 | Pre-XDR-TB | lineage3 | None | ERR4813220 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350423 | Pre-XDR-TB | lineage4.4.1.1 | za | SAMN02585966 | Pre-XDR-TB | lineage4.4.1.1 | za | SAMN02053758 | Pre-XDR-TB | lineage4.4.1.1 | za |
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