Rv3854c - p.Asn379Asp
Drug resistance types
0 Sensitive
1 RR-TB
36 HR-TB
377 MDR-TB
154 Pre-XDR-TB
12 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 550 |
| lineage2.2.1;lineage4.2.1 | 20 |
| lineage2.2.1;lineage4.2.1.1 | 3 |
| lineage4.5 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage2.2.1;lineage4.2 | 1 |
| lineage2.2.1;lineage4 | 3 |
| lineage2.2.1;lineage4.3.3 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 581 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1169035 | MDR-TB | lineage2.2.1 | None | ERR4831254 | MDR-TB | lineage2.2.1 | de | SRR14782738 | HR-TB | lineage2.2.1 | None | SRR7645951 | MDR-TB | lineage2.2.1 | None | ERR11049501 | MDR-TB | lineage2.2.1 | None | ERR13285706 | MDR-TB | lineage2.2.1 | None | ERR11798627 | MDR-TB | lineage2.2.1 | None | SRR6807681 | MDR-TB | lineage2.2.1 | None | SRR23310831 | HR-TB | lineage2.2.1 | None | ERR4276884 | MDR-TB | lineage2.2.1 | None | SRR14782343 | MDR-TB | lineage2.2.1 | None | SRR10380033 | Pre-XDR-TB | lineage2.2.1 | None | SRR7646064 | MDR-TB | lineage2.2.1 | None | SRR1169100 | MDR-TB | lineage2.2.1 | None | SRR28351194 | HR-TB | lineage2.2.1 | None | SRR28351199 | MDR-TB | lineage2.2.1 | None | SRR5153925 | MDR-TB | lineage2.2.1 | None | SRR14801586 | MDR-TB | lineage2.2.1 | None | SRR14802140 | MDR-TB | lineage2.2.1 | None | SRR14807652 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380186 | MDR-TB | lineage2.2.1 | None | ERR4872315 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498568 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782083 | MDR-TB | lineage2.2.1 | None | ERR10762232 | MDR-TB | lineage2.2.1 | None | SRR28351629 | MDR-TB | lineage2.2.1 | None | SRR5153919 | MDR-TB | lineage2.2.1 | None | SRR10380201 | MDR-TB | lineage2.2.1 | None | SRR7645949 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782510 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782276 | HR-TB | lineage2.2.1;lineage4.2.1 | None | ERR10762285 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276221 | MDR-TB | lineage2.2.1 | None | SAMN02584590 | MDR-TB | lineage2.2.1 | md | ERR11798614 | MDR-TB | lineage2.2.1 | None | ERR13276156 | MDR-TB | lineage2.2.1 | None | SRR14801973 | MDR-TB | lineage2.2.1 | None | SRR10380068 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310870 | MDR-TB | lineage2.2.1 | None | ERR13284480 | MDR-TB | lineage2.2.1 | None | SRR14782772 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798632 | MDR-TB | lineage2.2.1 | None | SRR5153841 | MDR-TB | lineage2.2.1 | None | SRR10379927 | MDR-TB | lineage2.2.1 | None | ERR4872292 | MDR-TB | lineage2.2.1 | None | SRR10380110 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285744 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379918 | MDR-TB | lineage2.2.1 | None | SRR3743399 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807622 | HR-TB | lineage2.2.1 | None | ERR11798610 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285735 | MDR-TB | lineage2.2.1 | None | SRR14782081 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | ERR4872328 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311008 | MDR-TB | lineage2.2.1 | None | ERR13285868 | MDR-TB | lineage2.2.1 | None | SRR7755704 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR11798630 | MDR-TB | lineage2.2.1 | None | ERR11798623 | MDR-TB | lineage2.2.1 | None | SRR23310989 | MDR-TB | lineage2.2.1 | None | SRR22048402 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379895 | MDR-TB | lineage2.2.1 | None | SRR10379882 | MDR-TB | lineage2.2.1 | None | SAMN02584644 | MDR-TB | lineage2.2.1 | md | SRR14807471 | MDR-TB | lineage2.2.1 | None | SRR14802118 | HR-TB | lineage2.2.1 | None | SRR14807602 | MDR-TB | lineage2.2.1 | None | SRR7755686 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782252 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801721 | HR-TB | lineage2.2.1 | None | SRR7755708 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782660 | MDR-TB | lineage2.2.1 | None | SRR7755763 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910912 | MDR-TB | lineage2.2.1 | None | SRR28351618 | MDR-TB | lineage2.2.1 | None | SRR28351632 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762319 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285794 | MDR-TB | lineage2.2.1 | None | SRR14782486 | MDR-TB | lineage2.2.1 | None | SRR1166341 | MDR-TB | lineage2.2.1 | None | SRR1169159 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762449 | MDR-TB | lineage2.2.1 | None | SRR14801663 | MDR-TB | lineage2.2.1 | None | ERR10762268 | MDR-TB | lineage2.2.1 | None | SRR23311077 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166303 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782826 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801382 | MDR-TB | lineage2.2.1 | None | SRR3743376 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR6807723 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802032 | HR-TB | lineage2.2.1 | None | SRR3743373 | HR-TB | lineage2.2.1 | None | SRR14807455 | MDR-TB | lineage2.2.1 | None | SRR7755716 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285923 | MDR-TB | lineage2.2.1 | None | ERR13276356 | XDR-TB | lineage2.2.1 | None | ERR11798611 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782196 | MDR-TB | lineage2.2.1 | None | ERR10762292 | MDR-TB | lineage2.2.1 | None | SRR1166227 | MDR-TB | lineage2.2.1 | None | SRR23310978 | MDR-TB | lineage2.2.1 | None | SRR10379974 | MDR-TB | lineage2.2.1 | None | SRR14802011 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802042 | MDR-TB | lineage2.2.1 | None | SRR1169052 | MDR-TB | lineage2.2.1 | None | SRR29358129 | MDR-TB | lineage2.2.1 | None | ERR10762261 | MDR-TB | lineage2.2.1 | None | ERR10762443 | MDR-TB | lineage2.2.1 | None | SRR23311070 | MDR-TB | lineage2.2.1 | None | SRR671751 | Pre-XDR-TB | lineage4.5 | cn | SRR14807468 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807709 | MDR-TB | lineage2.2.1 | None | SRR14807601 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782298 | HR-TB | lineage2.2.1 | None | SRR14782461 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276174 | XDR-TB | lineage2.2.1 | None | ERR13285747 | MDR-TB | lineage2.2.1 | None | SRR14782352 | MDR-TB | lineage2.2.1 | None | SRR29358142 | MDR-TB | lineage2.2.1 | None | ERR10762354 | MDR-TB | lineage2.2.1 | None | SRR14781891 | MDR-TB | lineage2.2.1 | None | ERR10762293 | MDR-TB | lineage2.2.1 | None | ERR10762367 | MDR-TB | lineage2.2.1 | None | ERR11798626 | MDR-TB | lineage2.2.1 | None | ERR11798605 | MDR-TB | lineage2.2.1 | None | ERR11067565 | MDR-TB | lineage2.2.1 | None | SRR14802019 | MDR-TB | lineage2.2.1 | None | SRR28351608 | MDR-TB | lineage2.2.1 | None | SRR28498578 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872305 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762412 | Pre-XDR-TB | lineage2.2.1 | None | ERR1353082 | MDR-TB | lineage2.2.1 | None | ERR11043975 | XDR-TB | lineage2.2.1 | None | SRR1168974 | MDR-TB | lineage2.2.1 | None | ERR11798612 | MDR-TB | lineage2.2.1 | None | SRR28351638 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498567 | MDR-TB | lineage2.2.1 | None | SRR28351602 | MDR-TB | lineage2.2.1 | None | SRR28498556 | MDR-TB | lineage2.2.1 | None | SRR5153816 | MDR-TB | lineage2.2.1 | None | SRR28498590 | MDR-TB | lineage2.2.1 | None | SRR28351219 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498651 | MDR-TB | lineage2.2.1 | None | SRR5153852 | MDR-TB | lineage2.2.1 | None | SRR28351190 | MDR-TB | lineage2.2.1 | None | SRR28351246 | MDR-TB | lineage2.2.1 | None | SRR10380184 | Pre-XDR-TB | lineage2.2.1 | None | SRR1168994 | MDR-TB | lineage2.2.1 | None | ERR7911054 | MDR-TB | lineage2.2.1 | md | ERR7910908 | MDR-TB | lineage2.2.1 | md | ERR7910920 | MDR-TB | lineage2.2.1 | md | ERR7911032 | MDR-TB | lineage2.2.1 | md | ERR7911035 | MDR-TB | lineage2.2.1 | md | ERR7911093 | MDR-TB | lineage2.2.1 | md | ERR7911036 | MDR-TB | lineage2.2.1 | md | SRR6807706 | MDR-TB | lineage2.2.1 | None | SRR14782195 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR11082741 | MDR-TB | lineage2.2.1 | None | SRR28498678 | MDR-TB | lineage2.2.1 | None | ERR10762472 | MDR-TB | lineage2.2.1 | None | SRR23311051 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311025 | HR-TB | lineage2.2.1 | None | ERR4829687 | HR-TB | lineage2.2.1 | it | ERR11798604 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782303 | HR-TB | lineage2.2.1 | None | ERR11798635 | HR-TB | lineage2.2.1;lineage4.8 | None | ERR11798613 | MDR-TB | lineage2.2.1 | None | SRR14781979 | MDR-TB | lineage2.2.1 | None | ERR10762318 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801495 | MDR-TB | lineage2.2.1 | None | SRR14782553 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380187 | MDR-TB | lineage2.2.1 | None | SRR14807574 | MDR-TB | lineage2.2.1 | None | SRR14801606 | MDR-TB | lineage2.2.1 | None | SRR7645868 | HR-TB | lineage2.2.1 | None | SRR28351637 | MDR-TB | lineage2.2.1 | None | SRR7646051 | Pre-XDR-TB | lineage2.2.1;lineage4.2 | None | SRR28351624 | MDR-TB | lineage2.2.1 | None | ERR2600524 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910924 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311019 | HR-TB | lineage2.2.1 | None | SRR16088414 | MDR-TB | lineage2.2.1 | None | SRR14782765 | MDR-TB | lineage2.2.1 | None | SRR8649110 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380020 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292568 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798609 | MDR-TB | lineage2.2.1 | None | ERR10762486 | MDR-TB | lineage2.2.1 | None | SRR23310838 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807710 | MDR-TB | lineage2.2.1;lineage4 | None | SRR7755744 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285917 | MDR-TB | lineage2.2.1 | None | ERR13285799 | MDR-TB | lineage2.2.1 | None | ERR13284952 | MDR-TB | lineage2.2.1 | None | ERR11798624 | MDR-TB | lineage2.2.1 | None | SRR10380246 | MDR-TB | lineage2.2.1 | None | ERR11798602 | MDR-TB | lineage2.2.1 | None | SRR14807647 | MDR-TB | lineage2.2.1 | None | SRR10380008 | MDR-TB | lineage2.2.1 | None | ERR13292537 | MDR-TB | lineage2.2.1 | None | ERR13285723 | MDR-TB | lineage2.2.1 | None | SRR7645861 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807662 | MDR-TB | lineage2.2.1 | None | SRR7755731 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831237 | MDR-TB | lineage2.2.1 | None | SRR7755696 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | SRR14801915 | MDR-TB | lineage2.2.1 | None | SRR23310957 | MDR-TB | lineage2.2.1 | None | SRR10380178 | Pre-XDR-TB | lineage2.2.1 | None | ERR2864261 | HR-TB | lineage2.2.1 | None | SRR7755673 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285787 | MDR-TB | lineage2.2.1 | None | SRR14781983 | MDR-TB | lineage2.2.1 | None | ERR13292578 | MDR-TB | lineage2.2.1 | None | ERR4830598 | MDR-TB | lineage2.2.1 | de | SRR21689845 | MDR-TB | lineage2.2.1 | None | SRR28351200 | HR-TB | lineage2.2.1 | None | ERR13285863 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801304 | MDR-TB | lineage2.2.1 | None | ERR11798608 | MDR-TB | lineage2.2.1 | None | SRR14782325 | MDR-TB | lineage2.2.1 | None | SRR3743488 | MDR-TB | lineage2.2.1 | None | SRR14802035 | MDR-TB | lineage2.2.1 | None | SRR23310837 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872333 | MDR-TB | lineage2.2.1 | None | SRR14801421 | MDR-TB | lineage2.2.1 | None | SRR23310927 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782109 | MDR-TB | lineage2.2.1 | None | SAMN02584623 | MDR-TB | lineage2.2.1 | md | SRR14801329 | MDR-TB | lineage2.2.1 | None | SRR14802111 | MDR-TB | lineage2.2.1 | None | SRR7755691 | MDR-TB | lineage2.2.1 | None | SRR28351191 | MDR-TB | lineage2.2.1 | None | SRR28351511 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498431 | MDR-TB | lineage2.2.1 | None | SRR10379922 | MDR-TB | lineage2.2.1 | None | SRR1166157 | MDR-TB | lineage2.2.1 | None | SRR7645886 | MDR-TB | lineage2.2.1 | None | SRR6807753 | MDR-TB | lineage2.2.1 | None | SRR28351612 | MDR-TB | lineage2.2.1 | None | ERR13285830 | MDR-TB | lineage2.2.1 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR13285702 | MDR-TB | lineage2.2.1 | None | SRR23310868 | XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR29126363 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802092 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR14807469 | XDR-TB | lineage2.2.1 | None | SRR7645929 | RR-TB | lineage2.2.1 | None | SRR14801959 | MDR-TB | lineage2.2.1 | None | SRR10380087 | MDR-TB | lineage2.2.1 | None | SRR28351517 | MDR-TB | lineage2.2.1 | None | SAMN02584597 | MDR-TB | lineage2.2.1 | md | ERR13285079 | MDR-TB | lineage2.2.1 | None | ERR13285751 | MDR-TB | lineage2.2.1 | None | ERR11798620 | MDR-TB | lineage2.2.1 | None | SRR6511610 | HR-TB | lineage2.2.1 | None | SRR7645956 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645887 | MDR-TB | lineage2.2.1 | None | ERR7910958 | MDR-TB | lineage2.2.1 | None | SRR14807563 | MDR-TB | lineage2.2.1 | None | SRR28351636 | MDR-TB | lineage2.2.1 | None | ERR10762257 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743409 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801819 | MDR-TB | lineage2.2.1 | None | SRR14781976 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380066 | MDR-TB | lineage2.2.1 | None | ERR10762385 | MDR-TB | lineage2.2.1 | None | ERR13285714 | MDR-TB | lineage2.2.1 | None | SRR14782323 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380023 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807654 | MDR-TB | lineage2.2.1 | None | SRR10380096 | MDR-TB | lineage2.2.1 | None | SRR10379931 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR14802122 | MDR-TB | lineage2.2.1 | None | SRR14807663 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | SRR14807624 | MDR-TB | lineage2.2.1 | None | SRR29341581 | MDR-TB | lineage2.2.1 | None | SRR14802196 | Pre-XDR-TB | lineage2.2.1 | None | SRR29358138 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782285 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872354 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166302 | MDR-TB | lineage2.2.1 | None | SRR3743404 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351300 | MDR-TB | lineage2.2.1 | None | SRR28351372 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351213 | MDR-TB | lineage2.2.1 | None | SRR28351195 | MDR-TB | lineage2.2.1 | None | SRR28351239 | MDR-TB | lineage2.2.1 | None | ERR7911227 | MDR-TB | lineage2.2.1 | md | SRR28498664 | MDR-TB | lineage2.2.1 | None | ERR7911250 | MDR-TB | lineage2.2.1 | md | ERR11050029 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910938 | MDR-TB | lineage2.2.1 | md | ERR7910945 | MDR-TB | lineage2.2.1 | md | ERR11798621 | MDR-TB | lineage2.2.1 | None | ERR7911042 | MDR-TB | lineage2.2.1 | md | ERR7911064 | MDR-TB | lineage2.2.1 | md | ERR7910897 | MDR-TB | lineage2.2.1 | md | ERR7910900 | MDR-TB | lineage2.2.1 | md | ERR7910904 | MDR-TB | lineage2.2.1 | md | ERR7911025 | MDR-TB | lineage2.2.1 | md | ERR7911028 | MDR-TB | lineage2.2.1 | md | ERR4872271 | XDR-TB | lineage2.2.1 | None | ERR10762361 | MDR-TB | lineage2.2.1 | None | ERR1353083 | MDR-TB | lineage2.2.1 | None | ERR4872334 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645840 | MDR-TB | lineage2.2.1 | None | SRR14801596 | MDR-TB | lineage2.2.1 | None | SRR14802241 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802266 | MDR-TB | lineage2.2.1 | None | SRR7755738 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR4830092 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR14782547 | HR-TB | lineage2.2.1 | None | SRR7755663 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044415 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169182 | HR-TB | lineage2.2.1 | None | ERR10762296 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782645 | MDR-TB | lineage2.2.1 | None | SRR28351510 | MDR-TB | lineage2.2.1 | None | SRR13243563 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310892 | MDR-TB | lineage2.2.1 | None | SRR14782365 | HR-TB | lineage2.2.1 | None | SRR14802167 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR14801747 | MDR-TB | lineage2.2.1 | None | SRR14801912 | MDR-TB | lineage2.2.1 | None | SRR14782449 | HR-TB | lineage2.2.1 | None | SRR5153923 | MDR-TB | lineage2.2.1 | None | ERR10762438 | MDR-TB | lineage2.2.1 | None | SRR7755705 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR4872282 | MDR-TB | lineage2.2.1 | None | SRR23311022 | MDR-TB | lineage2.2.1 | None | SRR7755675 | MDR-TB | lineage2.2.1 | None | SRR14802077 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872277 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762394 | MDR-TB | lineage2.2.1 | None | SRR7755689 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR10380123 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802208 | HR-TB | lineage2.2.1 | None | SRR23310956 | MDR-TB | lineage2.2.1 | None | ERR10762227 | MDR-TB | lineage2.2.1 | None | ERR11044533 | MDR-TB | lineage2.2.1 | None | SRR29356650 | MDR-TB | lineage2.2.1 | None | SRR14807616 | MDR-TB | lineage2.2.1 | None | SRR23310846 | MDR-TB | lineage2.2.1 | None | ERR13285786 | MDR-TB | lineage2.2.1 | None | SRR10380042 | MDR-TB | lineage2.2.1 | None | SRR7645912 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR7755702 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755720 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR7755739 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285858 | MDR-TB | lineage2.2.1 | None | SRR14802017 | MDR-TB | lineage2.2.1 | None | ERR11798631 | MDR-TB | lineage2.2.1 | None | SRR1169172 | MDR-TB | lineage2.2.1 | None | ERR11082578 | MDR-TB | lineage2.2.1 | None | SRR23310825 | HR-TB | lineage2.2.1 | None | SRR14801916 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798615 | MDR-TB | lineage2.2.1 | None | ERR11798619 | MDR-TB | lineage2.2.1 | None | ERR11798625 | MDR-TB | lineage2.2.1 | None | ERR4872262 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807581 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865287 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831769 | MDR-TB | lineage2.2.1 | None | SRR23311053 | MDR-TB | lineage2.2.1 | None | SRR5153926 | MDR-TB | lineage2.2.1 | None | SRR7755766 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801597 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285856 | MDR-TB | lineage2.2.1 | None | SRR6807724 | MDR-TB | lineage2.2.1 | None | ERR11798617 | MDR-TB | lineage2.2.1 | None | ERR13285843 | MDR-TB | lineage2.2.1 | None | SRR28498519 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872342 | MDR-TB | lineage2.2.1 | None | SRR14801490 | MDR-TB | lineage2.2.1 | None | SRR7646028 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782041 | MDR-TB | lineage2.2.1 | None | SRR14782223 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743433 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285764 | Pre-XDR-TB | lineage2.2.1 | None | SRR7646026 | MDR-TB | lineage2.2.1 | None | ERR13292552 | MDR-TB | lineage2.2.1 | None | ERR10762325 | MDR-TB | lineage2.2.1 | None | ERR13285807 | MDR-TB | lineage2.2.1 | None | ERR10762337 | MDR-TB | lineage2.2.1 | None | ERR10762478 | MDR-TB | lineage2.2.1 | None | SRR28498628 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310979 | HR-TB | lineage2.2.1 | None | ERR11243533 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645913 | MDR-TB | lineage2.2.1 | None | ERR13292544 | MDR-TB | lineage2.2.1 | None | ERR11798622 | MDR-TB | lineage2.2.1 | None | ERR10762345 | MDR-TB | lineage2.2.1 | None | SRR10379967 | MDR-TB | lineage2.2.1 | None | SRR14781850 | MDR-TB | lineage2.2.1 | None | SRR14801594 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379887 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166268 | MDR-TB | lineage2.2.1 | None | ERR13292550 | MDR-TB | lineage2.2.1 | None | SRR23310959 | MDR-TB | lineage2.2.1 | None | SRR10379905 | MDR-TB | lineage2.2.1 | None | SRR14802033 | MDR-TB | lineage2.2.1 | None | ERR11798629 | MDR-TB | lineage2.2.1 | None | ERR13285893 | MDR-TB | lineage2.2.1 | None | ERR13285835 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802066 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798603 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755647 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276891 | MDR-TB | lineage2.2.1 | None | SRR14782235 | MDR-TB | lineage2.2.1 | None | SRR14807557 | MDR-TB | lineage2.2.1 | None | SRR14802258 | MDR-TB | lineage2.2.1 | None | ERR13285784 | MDR-TB | lineage2.2.1 | None | SRR6807715 | MDR-TB | lineage2.2.1 | None | ERR11798628 | MDR-TB | lineage2.2.1 | None | SRR1166093 | MDR-TB | lineage2.2.1 | None | ERR13285846 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044187 | MDR-TB | lineage2.2.1 | None | ERR13285832 | MDR-TB | lineage2.2.1 | None | SRR14801354 | MDR-TB | lineage2.2.1 | None | SRR28351617 | MDR-TB | lineage2.2.1 | None | SRR3743370 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782361 | MDR-TB | lineage2.2.1 | None | SRR14782214 | MDR-TB | lineage2.2.1 | None | ERR11798607 | MDR-TB | lineage2.2.1 | None | ERR13285777 | MDR-TB | lineage2.2.1 | None | SRR7755683 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR13276332 | MDR-TB | lineage2.2.1 | None | SRR14782767 | HR-TB | lineage2.2.1 | None | SRR23310967 | MDR-TB | lineage2.2.1 | None | ERR13260097 | MDR-TB | lineage2.2.1 | None | SRR14807539 | MDR-TB | lineage2.2.1 | None | ERR4872268 | MDR-TB | lineage2.2.1 | None | SRR14801940 | MDR-TB | lineage2.2.1 | None | SRR23310847 | MDR-TB | lineage2.2.1 | None | SRR28498695 | HR-TB | lineage2.2.1 | None | ERR10762236 | MDR-TB | lineage2.2.1 | None | ERR10762464 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911246 | MDR-TB | lineage2.2.1 | md | ERR7911261 | MDR-TB | lineage2.2.1 | md | SRR28498685 | MDR-TB | lineage2.2.1 | None | SRR28498681 | MDR-TB | lineage2.2.1 | None | SRR28498650 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910963 | MDR-TB | lineage2.2.1 | md | ERR7910966 | MDR-TB | lineage2.2.1 | md | ERR7910932 | MDR-TB | lineage2.2.1;lineage4 | md | ERR7911058 | Pre-XDR-TB | lineage2.2.1 | md | ERR7911078 | MDR-TB | lineage2.2.1 | md | ERR7911081 | MDR-TB | lineage2.2.1 | md | ERR7911082 | MDR-TB | lineage2.2.1 | md | SRR14782421 | MDR-TB | lineage2.2.1 | None | SRR14801351 | MDR-TB | lineage2.2.1 | None | SRR14801996 | HR-TB | lineage2.2.1 | None | SRR5153853 | MDR-TB | lineage2.2.1 | None | SRR28351655 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762306 | MDR-TB | lineage2.2.1 | None | SRR6807685 | MDR-TB | lineage2.2.1 | None | ERR11798616 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782174 | MDR-TB | lineage2.2.1 | None | SRR14802260 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807593 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807681 | MDR-TB | lineage2.2.1 | None | SRR10380209 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR14807561 | MDR-TB | lineage2.2.1 | None | SRR23311005 | MDR-TB | lineage2.2.1 | None | SRR16370527 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044205 | MDR-TB | lineage2.2.1 | None | SRR28351661 | MDR-TB | lineage2.2.1 | None | ERR4829037 | MDR-TB | lineage2.2.1 | None | SRR28351251 | MDR-TB | lineage2.2.1 | None | SRR1166087 | HR-TB | lineage2.2.1 | None | ERR13285798 | MDR-TB | lineage2.2.1 | None | SRR28351198 | HR-TB | lineage2.2.1 | None | ERR10762270 | MDR-TB | lineage2.2.1 | None | SRR23311027 | XDR-TB | lineage2.2.1 | None | SRR14781955 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801947 | MDR-TB | lineage2.2.1 | None | SRR14802157 | MDR-TB | lineage2.2.1 | None | ERR13285825 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311050 | MDR-TB | lineage2.2.1 | None | SRR28498492 | MDR-TB | lineage2.2.1 | None | ERR13276129 | MDR-TB | lineage2.2.1 | None | ERR13276137 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02584583 | MDR-TB | lineage2.2.1 | md | SAMN02584646 | HR-TB | lineage2.2.1 | md | SRR10380222 | MDR-TB | lineage2.2.1 | None | SRR23310921 | MDR-TB | lineage2.2.1 | None | SRR23310968 | MDR-TB | lineage2.2.1 | None | ERR4872331 | XDR-TB | lineage2.2.1 | None | SRR28351514 | MDR-TB | lineage2.2.1 | None | ERR10762408 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755750 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR14782623 | MDR-TB | lineage2.2.1 | None | SRR3743489 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798606 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782555 | Other | lineage2.2.1 | None | ERR4872304 | MDR-TB | lineage2.2.1 | None | ERR4872351 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498374 | MDR-TB | lineage2.2.1 | None | SRR14782357 | HR-TB | lineage2.2.1 | None | SRR28498724 | MDR-TB | lineage2.2.1 | None | SRR23310941 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311038 | MDR-TB | lineage2.2.1 | None | SRR7645946 | MDR-TB | lineage2.2.1 | None | SRR7755737 | MDR-TB | lineage2.2.1 | None | SRR14782265 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782475 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782507 | XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR14801975 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910971 | MDR-TB | lineage2.2.1 | md | ERR2516217 | MDR-TB | lineage2.2.1 | be | ERR2510707 | MDR-TB | lineage2.2.1 | it | ERR4829860 | Pre-XDR-TB | lineage2.2.1 | it | ERR4829827 | Pre-XDR-TB | lineage2.2.1 | it | ERR4828817 | MDR-TB | lineage2.2.1 | None | SRR14782606 | MDR-TB | lineage2.2.1 | None | SRR14801525 | MDR-TB | lineage2.2.1 | None | SRR7645831 | MDR-TB | lineage2.2.1 | None | ERR11081169 | MDR-TB | lineage2.2.1 | None | ERR11044004 | XDR-TB | lineage2.2.1 | None | ERR11798618 | MDR-TB | lineage2.2.1 | None | SRR10380247 | MDR-TB | lineage2.2.1 | None | ERR10762247 | MDR-TB | lineage2.2.1 | None | ERR10762481 | MDR-TB | lineage2.2.1 | None | ERR10762482 | MDR-TB | lineage2.2.1 | None | SRR6807705 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311009 | MDR-TB | lineage2.2.1 | None | ERR4872335 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02584591 | MDR-TB | lineage2.2.1 | md | SRR14782562 | HR-TB | lineage2.2.1 | None | SRR14801496 | MDR-TB | lineage2.2.1 | None | SRR14801944 | MDR-TB | lineage2.2.1 | None | SRR14802046 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044577 | MDR-TB | lineage2.2.1 | None | ERR11043509 | MDR-TB | lineage2.2.1 | None | SRR7645789 | MDR-TB | lineage2.2.1 | None | SRR7645853 | MDR-TB | lineage2.2.1 | None | SRR7645889 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | SRR28351205 | MDR-TB | lineage2.2.1 | None | SRR7645960 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311037 | MDR-TB | lineage2.2.1 | None | SRR7646045 | MDR-TB | lineage2.2.1 | None | SAMN02584596 | Pre-XDR-TB | lineage2.2.1 | md | SRR6807739 | MDR-TB | lineage2.2.1 | None | ERR10762368 | MDR-TB | lineage2.2.1 | None | SRR14801341 | MDR-TB | lineage2.2.1 | None | SRR7645874 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR14807540 | MDR-TB | lineage2.2.1 | None | SRR14801989 | HR-TB | lineage2.2.1 | None | SRR14801981 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR4829122 | Pre-XDR-TB | lineage2.2.1 | it | SRR14802036 | MDR-TB | lineage2.2.1 | None | SRR14801941 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801987 | HR-TB | lineage2.2.1 | None | SRR14802080 | MDR-TB | lineage2.2.1 | None | SRR14802131 | MDR-TB | lineage2.2.1 | None | ERR4872317 | Pre-XDR-TB | lineage2.2.1 | None | SRR7646001 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762489 | MDR-TB | lineage2.2.1 | None | ERR13285867 | Pre-XDR-TB | lineage2.2.1 | None | SRR29126872 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351382 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR28498549 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285908 | MDR-TB | lineage2.2.1 | None | ERR10762240 | MDR-TB | lineage2.2.1 | None | ERR10762262 | MDR-TB | lineage2.2.1 | None | ERR13285386 | MDR-TB | lineage2.2.1 | None | ERR4276905 | MDR-TB | lineage2.2.1 | None | ERR4831258 | XDR-TB | lineage2.2.1 | de | ERR4872320 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743401 | MDR-TB | lineage2.2.1 | None | SRR14782568 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807550 | MDR-TB | lineage2.2.1 | None | SRR23310855 | MDR-TB | lineage2.2.1 | None | SRR23311006 | MDR-TB | lineage2.2.1 | None | SRR5153834 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743400 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498546 | XDR-TB | lineage2.2.1 | None | ERR4872324 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807517 | MDR-TB | lineage2.2.1 | None | SRR7755718 | MDR-TB | lineage2.2.1 | None |
|---|
