Rv3862c - c.-54A>G


Drug resistance types
139 Sensitive 6 RR-TB 16 HR-TB 32 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 20 Other
lineage Counts
lineage Count
lineage2.2.1 197
lineage6.1.2;lineage4.1 1
lineage3 6
lineage2.2 6
lineage4.5;lineage2.2.1 2
lineage1.1.1.1 7
lineage2.2.1;lineage1.1.1.1 2
lineage2.2.1.1 1
lineage2.2.2;lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 223
Geographic prevalence
Country level data for this variant is available for 89 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR031453 Sensitive lineage2.2.1 None
ERR031472 Sensitive lineage6.1.2;lineage4.1 None
ERR031476 Sensitive lineage2.2.1 None
ERR11043969 Sensitive lineage3 None
ERR1035124 Sensitive lineage2.2.1 vn
ERR11043228 Sensitive lineage2.2.1 None
ERR4195612 Sensitive lineage2.2.1 None
ERR11043948 Sensitive lineage3 None
ERR4810474 MDR-TB lineage2.2.1 cn
ERR4810469 MDR-TB lineage2.2.1 cn
ERR4810691 Sensitive lineage2.2.1 cn
ERR4810470 MDR-TB lineage2.2.1 cn
ERR4810566 Sensitive lineage2.2.1 cn
ERR4810866 Pre-XDR-TB lineage2.2.1 cn
ERR4810690 Sensitive lineage2.2.1 cn
ERR4810837 Other lineage2.2.1 cn
ERR4810794 Pre-XDR-TB lineage2.2.1 cn
ERR4810902 RR-TB lineage2.2.1 None
ERR4810953 MDR-TB lineage2.2.1 cn
ERR4810907 Sensitive lineage2.2.1 cn
ERR4810992 Pre-XDR-TB lineage2.2.1 cn
ERR4811548 Sensitive lineage2.2.1 cn
ERR4811202 Sensitive lineage2.2 cn
ERR4811316 MDR-TB lineage2.2.1 cn
ERR4811076 Sensitive lineage4.5;lineage2.2.1 cn
ERR4811278 RR-TB lineage2.2.1 cn
ERR4811299 MDR-TB lineage2.2.1 cn
ERR4811543 Sensitive lineage2.2.1 cn
ERR6866941 Sensitive lineage2.2.1 None
ERR6866735 Other lineage2.2.1 None
ERR6866942 Sensitive lineage2.2.1 None
ERR751725 Other lineage2.2.1 th
ERR7339129 Sensitive lineage2.2.1 None
ERR718484 Other lineage2.2.1 th
ERR752091 Sensitive lineage2.2.1 th
ERR7911515 Other lineage2.2.1 vn
ERR7911169 MDR-TB lineage2.2.1 vn
ERR9119319 Sensitive lineage2.2.1 None
ERR9121738 Sensitive lineage2.2.1 None
ERR9119412 Sensitive lineage2.2.1 None
ERR9119428 Sensitive lineage2.2.1 None
ERR9119416 Sensitive lineage1.1.1.1 None
SRR10305711 Sensitive lineage2.2.1 None
SRR125288 Sensitive lineage2.2.1;lineage1.1.1.1 None
SRR10305992 MDR-TB lineage2.2.1 None
SRR12142375 MDR-TB lineage2.2.1 None
SRR10305712 Sensitive lineage2.2.1 None
SRR10808913 Sensitive lineage2.2.1 None
SRR10808947 Sensitive lineage2.2.1 None
SRR12142401 Sensitive lineage2.2.1 None
SRR12199441 HR-TB lineage2.2.1 None
SRR15315888 Sensitive lineage2.2.1 None
SRR15315752 Other lineage2.2.1 None
SRR15315782 Sensitive lineage2.2.1 None
SRR15315827 MDR-TB lineage2.2.1 None
SRR15315828 MDR-TB lineage2.2.1 None
SRR15315889 Other lineage2.2.1 None
SRR15316389 Sensitive lineage2.2.1 None
SRR15316008 Sensitive lineage2.2.1 None
SRR15316027 Sensitive lineage2.2.1 None
SRR15315961 HR-TB lineage2.2.1 None
SRR15316006 Sensitive lineage2.2.1 None
SRR15316057 Sensitive lineage2.2.1 None
SRR15316163 Sensitive lineage2.2.1 None
SRR15316293 Sensitive lineage2.2.1 None
SRR15316439 Other lineage2.2.1 None
SRR15316467 Sensitive lineage2.2.1 None
SRR15723026 Sensitive lineage2.2.1 None
SRR15368735 Sensitive lineage2.2.1 None
SRR15368832 Sensitive lineage2.2.1 None
SRR15368861 Sensitive lineage2.2.1 None
SRR15368985 Sensitive lineage2.2.1 None
SRR15723056 Sensitive lineage2.2.1 None
SRR15723057 Sensitive lineage2.2.1 None
SRR15368845 Sensitive lineage2.2.1 None
SRR15369044 Sensitive lineage2.2.1 None
SRR15723159 Sensitive lineage2.2.1 None
SRR15723202 MDR-TB lineage2.2.1 None
SRR15723177 Sensitive lineage2.2.1 None
SRR15723249 Sensitive lineage2.2.1 None
SRR15723253 Sensitive lineage2.2.1 None
SRR16115027 HR-TB lineage2.2.1 None
SRR16089683 Sensitive lineage2.2.1 None
SRR17687521 Sensitive lineage2.2.1 None
SRR16370692 MDR-TB lineage2.2.1 None
SRR17688640 HR-TB lineage2.2.1 None
SRR17712106 HR-TB lineage2.2.1 None
SRR17712082 Sensitive lineage2.2.1 None
SRR18495622 Sensitive lineage2.2.1 None
SRR17787485 Sensitive lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002950 MDR-TB lineage2.2.1 None
SRR18054797 MDR-TB lineage2.2.1 None
SRR19612355 Sensitive lineage2.2.1 None
SRR18511644 Sensitive lineage2.2.1 None
ERR11050787 Sensitive lineage3 None
SRR19612244 Other lineage2.2.1 None
SRR18500612 Sensitive lineage2.2.1 None
SRR18500610 Sensitive lineage2.2.1 None
SRR18911133 HR-TB lineage2.2.1 None
SRR18912553 Sensitive lineage2.2.1 None
SRR20632806 Pre-XDR-TB lineage2.2.1 None
SRR20632800 RR-TB lineage2.2.1 None
SRR20632777 Pre-XDR-TB lineage2.2.1 None
SRR20632824 Pre-XDR-TB lineage2.2.1 None
SRR20969400 Sensitive lineage2.2.1 None
SRR20969390 MDR-TB lineage2.2.1 None
SRR20969874 HR-TB lineage2.2.1 None
SRR20969750 Sensitive lineage4.5;lineage2.2.1 None
SRR20969483 Sensitive lineage2.2.1 None
SRR20970029 Sensitive lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR21277035 Other lineage2.2.1 None
SRR20970059 Sensitive lineage2.2.1 None
SRR21277224 Sensitive lineage2.2.1 None
SRR21277425 Sensitive lineage2.2.1 None
SRR21277244 Sensitive lineage2.2.1 None
SRR21277772 Sensitive lineage2.2.1 None
SRR21277441 Sensitive lineage2.2.1 None
SRR21277669 Other lineage2.2.1 None
ERR11050890 Sensitive lineage3 None
SRR21277763 Other lineage2.2.1 None
SRR21291163 Sensitive lineage2.2.1 None
SRR21277794 Other lineage2.2.1 None
SRR21291134 Sensitive lineage2.2.1 None
SRR21279419 HR-TB lineage2.2 None
SRR21576730 RR-TB lineage2.2.1 None
SRR21658554 Sensitive lineage2.2.1 None
SRR21728725 Sensitive lineage2.2.1 None
SRR21675431 Sensitive lineage2.2.1 None
SRR21677934 Other lineage2.2.1 None
SRR21711106 Other lineage2.2.1 None
SRR21728721 HR-TB lineage2.2.1 None
SRR21887684 MDR-TB lineage2.2.1 None
SRR21031721 Sensitive lineage2.2.1 None
SRR14519101 Sensitive lineage2.2.1 None
ERR11082016 Sensitive lineage3 None
SRR14519122 Sensitive lineage2.2.1 None
SRR1723830 Sensitive lineage2.2.1 cn
SRR1723831 HR-TB lineage2.2.1 cn
SRR1723832 MDR-TB lineage2.2.1 cn
SRR2024981 MDR-TB lineage2.2.1 cn
SRR1723828 RR-TB lineage2.2.1 cn
ERR4813157 Pre-XDR-TB lineage2.2.1 None
SRR1723833 Sensitive lineage2.2.1 cn
SRR6280163 Sensitive lineage2.2.1 cn
ERR2184594 Sensitive lineage2.2.1 pe
ERR2184564 Sensitive lineage2.2.1 pe
SRR5065334 Sensitive lineage2.2.1 vn
ERR2513391 Sensitive lineage2.2.1 gb
SRR5065354 Sensitive lineage2.2.1 vn
SRR5065525 Sensitive lineage1.1.1.1 vn
SRR5067237 Sensitive lineage2.2.1 vn
ERR234253 Sensitive lineage2.2.1 us
ERR234269 Sensitive lineage2.2.1 us
SRR5067235 Sensitive lineage1.1.1.1 vn
ERR553387 Sensitive lineage2.2.1 de
ERR234100 Sensitive lineage2.2.1 cn
SRR5073933 HR-TB lineage2.2.1 vn
SRR5073932 Sensitive lineage1.1.1.1 vn
SRR5067319 Sensitive lineage2.2.1 vn
SRR5067351 Sensitive lineage2.2.1 vn
SRR5067326 HR-TB lineage2.2.1.1 vn
SRR5073681 Other lineage2.2.1 vn
SRR5067374 HR-TB lineage2.2.2;lineage2.2.1 vn
SRR5067413 Other lineage2.2.1 vn
SRR5067386 Sensitive lineage1.1.1.1 vn
SRR5067403 Sensitive lineage2.2.1 vn
SRR5067557 Sensitive lineage2.2.1 vn
SRR5067499 Sensitive lineage2.2.1 vn
SRR5073972 MDR-TB lineage2.2.1 vn
ERR551106 Sensitive lineage2.2.1 de
SRR5067590 Sensitive lineage2.2.1 vn
SRR5067574 Sensitive lineage2.2.1 vn
SRR5065226 Sensitive lineage2.2.1 vn
ERR270627 Sensitive lineage2.2.1 None
SRR5073815 Sensitive lineage2.2.1 vn
SRR6280332 Sensitive lineage2.2.1 cn
SRR2024984 MDR-TB lineage2.2.1 cn
SRR20969837 Sensitive lineage2.2 None
ERR4830305 Sensitive lineage2.2.1 vn
SRR20969898 MDR-TB lineage2.2 None
ERR4822329 Sensitive lineage2.2.1 None
SRR5709900 Pre-XDR-TB lineage2.2.1 th
ERR4828270 Sensitive lineage2.2.1 vn
SRR20969911 Sensitive lineage2.2 None
ERR4828180 Sensitive lineage2.2.1 vn
ERR4828208 Sensitive lineage2.2.1;lineage1.1.1.1 vn
ERR4828275 Sensitive lineage2.2.1 None
ERR4828303 Other lineage2.2.1 vn
ERR4828488 MDR-TB lineage2.2.1 vn
SRR6152830 Sensitive lineage2.2.1 ca
ERR4830424 Sensitive lineage2.2.1 vn
ERR4830436 Sensitive lineage1.1.1.1 vn
ERR4830442 Sensitive lineage2.2.1 vn
ERR552976 Sensitive lineage2.2.1 de
SRR6152820 Sensitive lineage2.2.1 ca
SRR671743 MDR-TB lineage2.2.1 cn
SRR6152890 Other lineage2.2.1 ca
SRR6480522 Sensitive lineage2.2.1 None
ERR4831135 Sensitive lineage2.2.1 de
ERR4831732 MDR-TB lineage2.2.1 vn
SRR671735 MDR-TB lineage2.2.1 cn
SRR6153051 Sensitive lineage2.2.1 ca
SRR6824514 Sensitive lineage2.2.1 cn
ERR11067340 Sensitive lineage3 None
SRR671814 Sensitive lineage2.2.1 cn
ERR502893 Pre-XDR-TB lineage2.2.1 None
SRR6824571 MDR-TB lineage2.2.1 cn
SRR6280167 Sensitive lineage2.2.1 cn
SRR8651554 MDR-TB lineage2.2.1 cn
ERR502915 Sensitive lineage2.2.1 None
ERR502936 RR-TB lineage2.2.1 None
ERR502937 MDR-TB lineage2.2.1 None
SRR8237320 Sensitive lineage2.2.1 np
DRR034501 Sensitive lineage2.2.1 None
DRR034532 HR-TB lineage2.2.1 None
DRR188743 MDR-TB lineage2.2.1 None
DRR188670 HR-TB lineage2.2.1 None
DRR099684 HR-TB lineage1.1.1.1 None
DRR130164 Pre-XDR-TB lineage2.2.1 None
DRR130210 MDR-TB lineage2.2.1 None
DRR188951 Sensitive lineage2.2.1 None