Rv3862c - c.-73T>A
Drug resistance types
58 Sensitive
1 RR-TB
14 HR-TB
48 MDR-TB
33 Pre-XDR-TB
8 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 17 |
| lineage4.1.1 | 34 |
| lineage2.2.1 | 33 |
| lineage4.5 | 6 |
| lineage2.2.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.8 | 5 |
| lineage3.1.2.1 | 9 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 7 |
| lineage4.3.2 | 5 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2.1 | 6 |
| lineage4.7 | 4 |
| lineage3 | 17 |
| lineage4.6.2.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.3.3;lineage4.4.1.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.9 | 2 |
| lineage3.1.1 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.4.2 | 2 |
| lineage7 | 1 |
| lineage4.3.1 | 1 |
| lineage4.6.4 | 1 |
| lineage2.2.2;lineage4.4.1.1 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 171 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4809292 | MDR-TB | lineage4.4.1.1 | za | SRR13870373 | Pre-XDR-TB | lineage4.1.1 | None | SRR15316222 | Sensitive | lineage2.2.1 | None | SRR22249891 | Sensitive | lineage4.5 | None | ERR13195613 | MDR-TB | lineage2.2.2 | None | ERR12386805 | Sensitive | lineage4.3.4.1 | None | ERR330697 | Other | lineage4.4.1.1 | None | ERR4812985 | MDR-TB | lineage4.1.1 | pe | SRR27450206 | Other | lineage4.8 | None | ERR4817091 | Sensitive | lineage3.1.2.1 | gb | ERR11465638 | Sensitive | lineage4.3.2.1 | None | ERR5918053 | HR-TB | lineage4.4.1.1 | za | SRR29017326 | MDR-TB | lineage4.3.3 | None | ERR8975619 | HR-TB | lineage4.4.1.1 | None | SRR10040312 | MDR-TB | lineage2.2.1 | None | SRR6824417 | Sensitive | lineage2.2.1 | cn | ERR4813657 | MDR-TB | lineage4.3.2 | None | SRR19303854 | Sensitive | lineage4.3.3 | None | SRR5074105 | HR-TB | lineage2.2.1 | vn | SRR6280341 | Sensitive | lineage2.2.1 | cn | SRR2101024 | HR-TB | lineage4.2.2.2 | None | ERR13261662 | Pre-XDR-TB | lineage4.1.1 | None | ERR2503450 | HR-TB | lineage4.5 | None | ERR9891999 | Sensitive | lineage4.1.2.1 | None | DRR130189 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827624 | Sensitive | lineage4.3.3 | None | ERR11069089 | Sensitive | lineage4.7 | None | ERR4798489 | Other | lineage3 | in | ERR4828913 | Sensitive | lineage4.6.2.2 | None | SRR18714930 | MDR-TB | lineage4.2.1.1 | None | SRR10808814 | MDR-TB | lineage4.1.1 | None | ERR4813616 | MDR-TB | lineage4.3.2 | None | ERR12117902 | Pre-XDR-TB | lineage4.1.1 | None | SRR25515616 | Sensitive | lineage2.2.1.1 | None | ERR13260701 | MDR-TB | lineage4.1.1 | None | ERR9992937 | XDR-TB | lineage4.4.1.1 | None | SRR26112434 | Sensitive | lineage4.8 | None | ERR4812974 | Pre-XDR-TB | lineage4.1.1 | None | ERR4798179 | HR-TB | lineage3 | in | SRR7755674 | HR-TB | lineage2.2.1 | None | ERR4813021 | MDR-TB | lineage4.1.1 | None | SRR15722992 | Sensitive | lineage2.2.1 | None | SRR18213941 | Other | lineage4.4.1.1 | None | ERR2179847 | Sensitive | lineage3 | None | ERR4817520 | Sensitive | lineage3.1.2.1 | None | ERR6866953 | MDR-TB | lineage4.1.1 | None | ERR7910876 | MDR-TB | lineage4.1.1 | None | ERR4797287 | MDR-TB | lineage3 | in | SRR6484901 | MDR-TB | lineage2.2.1 | None | SRR22461582 | MDR-TB | lineage4.1.1 | None | SRR28045946 | XDR-TB | lineage2.2.1 | None | SRR28393660 | MDR-TB | lineage4.3.2 | None | SRR28046330 | Pre-XDR-TB | lineage3 | None | ERR4813137 | Pre-XDR-TB | lineage4.1.1 | None | SRR13870381 | Pre-XDR-TB | lineage4.1.1 | None | SRR1723862 | Sensitive | lineage2.2.1 | cn | ERR3335739 | Pre-XDR-TB | lineage3 | pk | SRR12416820 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277225 | Sensitive | lineage2.2.1 | None | ERR4972575 | XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | ERR775385 | Pre-XDR-TB | lineage4.1.1.3 | pe | SRR25534373 | Sensitive | lineage2.2.1 | None | ERR9992918 | XDR-TB | lineage4.4.1.1 | None | ERR182003 | Sensitive | lineage4.3.3 | mw | SRR2101135 | Other | lineage4.4.1.1 | None | SRR21576685 | MDR-TB | lineage4.5 | None | ERR3148038 | Pre-XDR-TB | lineage4.9 | None | ERR5979432 | Sensitive | lineage3.1.1 | None | SRR6824521 | MDR-TB | lineage2.2.1 | cn | ERR2707094 | Sensitive | lineage4.7 | cd | ERR4812816 | MDR-TB | lineage4.1.1 | None | SRR25515542 | Sensitive | lineage2.2.1.1 | None | ERR4810605 | Sensitive | lineage2.2.1 | cn | SRR24035839 | MDR-TB | lineage2.2.1 | None | SRR16058004 | Sensitive | lineage3 | None | ERR13267049 | XDR-TB | lineage2.2.1 | None | ERR8975010 | MDR-TB | lineage4.4.1.1 | None | ERR4812982 | MDR-TB | lineage4.1.1 | pe | ERR2906343 | HR-TB | lineage4.8 | None | ERR11049736 | Sensitive | lineage4.1.2.1 | None | ERR7911341 | MDR-TB | lineage4.1.1 | pe | SRR12420264 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821660 | Sensitive | lineage3.1.2.1 | gb | ERR9125561 | Sensitive | lineage3 | None | ERR4813341 | Pre-XDR-TB | lineage4.1.1 | pe | SRR25207065 | Pre-XDR-TB | lineage4.5 | None | ERR3063124 | Sensitive | lineage4.4.1.1 | None | ERR13260649 | MDR-TB | lineage4.1.1 | None | ERR4820791 | Sensitive | lineage3.1.2.1 | gb | SRR6280271 | Sensitive | lineage2.2.1 | cn | ERR9125738 | Sensitive | lineage3 | None | SRR13870369 | Pre-XDR-TB | lineage4.1.1 | None | SRR7645887 | MDR-TB | lineage2.2.1 | None | ERR10762311 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR8975165 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4812803 | MDR-TB | lineage4.1.1 | None | SRR18054780 | MDR-TB | lineage2.2.1 | None | SRR28394225 | MDR-TB | lineage4.1.1.3 | None | ERR6866612 | Other | lineage4.3.3 | None | ERR9992910 | XDR-TB | lineage4.4.1.1 | None | SRR21685243 | Sensitive | lineage1.2.1.2.1 | None | SRR28409380 | Sensitive | lineage4.3.3 | None | SRR28240177 | Sensitive | lineage4.1.2.1 | None | ERR10748441 | MDR-TB | lineage4.4.1.1 | None | SRR22461690 | MDR-TB | lineage4.1.1 | None | SRR1723466 | HR-TB | lineage2.2.1 | cn | ERR13260172 | MDR-TB | lineage4.3.2 | None | SRR2024924 | MDR-TB | lineage2.2.1 | cn | ERR2517017 | MDR-TB | lineage3 | gb | ERR1035206 | HR-TB | lineage4.8 | pt | SRR16058164 | Sensitive | lineage3 | None | ERR6866677 | Sensitive | lineage4.3.2 | None | ERR7910875 | Other | lineage4.1.1 | None | ERR2510455 | MDR-TB | lineage3 | pk | ERR9786395 | Sensitive | lineage4.7 | None | ERR9992888 | XDR-TB | lineage4.4.1.1 | None | SRR29273855 | Pre-XDR-TB | lineage4.8 | None | ERR4812833 | MDR-TB | lineage4.1.1 | pe | ERR4972499 | MDR-TB | lineage4.4.1.1 | None | ERR2179781 | Sensitive | lineage4.5 | cn | ERR4810901 | Sensitive | lineage4.4.2 | cn | ERR4813003 | MDR-TB | lineage4.1.1 | None | ERR13266263 | Sensitive | lineage3 | None | ERR4799772 | Other | lineage3.1.2.1 | None | SRR24256206 | HR-TB | lineage2.2.1 | None | ERR7910861 | MDR-TB | lineage4.1.1 | pe | ERR4813106 | Pre-XDR-TB | lineage4.1.1 | None | ERR551900 | Sensitive | lineage4.1.2.1 | de | ERR13285148 | Pre-XDR-TB | lineage4.9 | None | ERR4813150 | Pre-XDR-TB | lineage4.1.1 | None | ERR11043359 | Sensitive | lineage2.2.1 | None | SRR29231771 | Sensitive | lineage4.7 | None | ERR3287387 | Pre-XDR-TB | lineage4.1.1.3 | pe | SRR6280148 | Sensitive | lineage2.2.1 | cn | SRR7755764 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815341 | Sensitive | lineage3.1.2.1 | gb | ERR4814964 | Sensitive | lineage3.1.2.1 | None | SRR7755717 | Pre-XDR-TB | lineage2.2.1 | None | ERR1200613 | Sensitive | lineage7 | et | ERR2184684 | MDR-TB | lineage4.1.1 | pe | ERR4800358 | HR-TB | lineage3 | in | SRR16370329 | HR-TB | lineage4.5 | None | ERR3335743 | Pre-XDR-TB | lineage3 | pk | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR2515573 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR12268355 | Sensitive | lineage4.3.1 | None | ERR4813591 | MDR-TB | lineage4.1.1 | None | ERR11082575 | MDR-TB | lineage2.2.2 | None | ERR4811706 | Sensitive | lineage4.1.2.1 | pe | ERR7910877 | MDR-TB | lineage4.1.1 | None | ERR7911340 | Pre-XDR-TB | lineage4.1.1 | pe | ERR3063118 | RR-TB | lineage4.4.1.1 | None | ERR4813147 | Pre-XDR-TB | lineage4.1.1 | None | SRR10397266 | MDR-TB | lineage4.3.3 | None | SRR6484848 | Other | lineage4.1.2.1 | None | ERR4813330 | Pre-XDR-TB | lineage4.1.1 | None | ERR4972534 | XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | ERR11067983 | Sensitive | lineage3 | None | ERR1035310 | MDR-TB | lineage4.6.4 | br | ERR4831045 | Sensitive | lineage3 | np | SRR12142366 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748138 | Pre-XDR-TB | lineage2.2.2;lineage4.4.1.1 | None | SRR5067427 | Sensitive | lineage4.4.2 | vn | ERR294226 | HR-TB | lineage4.2.2.2 | None | ERR13266966 | Sensitive | lineage3.1.2.1 | None | SRR28046148 | Sensitive | lineage1.1.2 | None | ERR13291383 | Sensitive | lineage1.2.1.2.1 | None | ERR13262023 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819335 | Sensitive | lineage3.1.2.1 | None | ERR13260638 | MDR-TB | lineage4.1.1 | None | SRR25207147 | MDR-TB | lineage2.2.1 | None |
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