Rv3862c - c.-73T>A


Drug resistance types
52 Sensitive 1 RR-TB 14 HR-TB 41 MDR-TB 29 Pre-XDR-TB 7 XDR-TB 11 Other
lineage Counts
lineage Count
lineage2.2.1 30
lineage4.4.1.1 17
lineage4.1.1 30
lineage4.1.1.3 3
lineage4.8 4
lineage4.7 3
lineage4.2.2.2 2
lineage3 16
lineage4.1.2.1 6
lineage2.2.1.1 2
lineage7 1
lineage4.5 6
lineage4.6.2.2 1
lineage3.1.2.1 8
lineage4.2.1.1 1
lineage4.3.4.1 1
lineage4.3.3 6
lineage3.1.1 1
lineage4.3.3;lineage4.4.1.1 2
lineage4.4.2 2
lineage4.3.2 4
lineage2.2.2 1
lineage4.3.1 1
lineage4.6.4 1
lineage2.2.2;lineage4.4.1.1 1
lineage1.2.1.2.1 1
lineage4.9 1
lineage4.3.2.1 1
lineage2.2.1;lineage4.2.1 1
lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 155
Geographic prevalence
Country level data for this variant is available for 46 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7755674 HR-TB lineage2.2.1 None
ERR9992918 XDR-TB lineage4.4.1.1 None
ERR7910861 MDR-TB lineage4.1.1 pe
ERR4813106 Pre-XDR-TB lineage4.1.1 None
SRR6280148 Sensitive lineage2.2.1 cn
ERR3287387 Pre-XDR-TB lineage4.1.1.3 pe
ERR1035206 HR-TB lineage4.8 pt
ERR2707094 Sensitive lineage4.7 cd
SRR12416820 Pre-XDR-TB lineage2.2.1 None
ERR294226 HR-TB lineage4.2.2.2 None
SRR15722992 Sensitive lineage2.2.1 None
SRR16058164 Other lineage3 None
ERR4812803 MDR-TB lineage4.1.1 None
ERR551900 Sensitive lineage4.1.2.1 de
ERR4812816 MDR-TB lineage4.1.1 None
ERR8975165 Pre-XDR-TB lineage4.4.1.1 None
SRR25515542 Sensitive lineage2.2.1.1 None
ERR4810605 Sensitive lineage2.2.1 cn
ERR4812974 Pre-XDR-TB lineage4.1.1 None
ERR1200613 Sensitive lineage7 et
SRR25207065 Pre-XDR-TB lineage4.5 None
ERR4812982 MDR-TB lineage4.1.1 pe
ERR4798489 Other lineage3 in
ERR4828913 Sensitive lineage4.6.2.2 None
ERR11049736 Sensitive lineage4.1.2.1 None
ERR2906343 HR-TB lineage4.8 None
ERR4831045 Sensitive lineage3 np
ERR4821660 Sensitive lineage3.1.2.1 gb
ERR4813341 Pre-XDR-TB lineage4.1.1 pe
SRR18714930 MDR-TB lineage4.2.1.1 None
ERR12386805 Sensitive lineage4.3.4.1 None
SRR10397266 MDR-TB lineage4.3.3 None
ERR9992937 XDR-TB lineage4.4.1.1 None
ERR4827624 Sensitive lineage4.3.3 None
ERR9125561 Other lineage3 None
ERR4813330 Pre-XDR-TB lineage4.1.1 None
ERR12117902 Pre-XDR-TB lineage4.1.1 None
ERR5979432 Sensitive lineage3.1.1 None
SRR19303854 Sensitive lineage4.3.3 None
ERR4972534 XDR-TB lineage4.3.3;lineage4.4.1.1 None
ERR11067983 Sensitive lineage3 None
SRR27450206 Other lineage4.8 None
SRR5067427 Sensitive lineage4.4.2 vn
ERR6866953 MDR-TB lineage4.1.1 None
ERR4817520 Sensitive lineage3.1.2.1 None
SRR28409380 Sensitive lineage4.3.3 None
SRR28394225 MDR-TB lineage4.1.1.3 None
SRR28045946 XDR-TB lineage2.2.1 None
SRR28393660 MDR-TB lineage4.3.2 None
ERR4812833 MDR-TB lineage4.1.1 pe
ERR4813657 MDR-TB lineage4.3.2 None
ERR4972499 MDR-TB lineage4.4.1.1 None
SRR2101024 HR-TB lineage4.2.2.2 None
ERR11082575 MDR-TB lineage2.2.2 None
ERR4814964 Sensitive lineage3.1.2.1 None
ERR7910875 Other lineage4.1.1 None
SRR7755764 Pre-XDR-TB lineage2.2.1 None
ERR4813003 MDR-TB lineage4.1.1 None
SRR1723862 Sensitive lineage2.2.1 cn
SRR15316222 Sensitive lineage2.2.1 None
SRR5074105 HR-TB lineage2.2.1 vn
ERR11043359 Sensitive lineage2.2.1 None
ERR9891999 Sensitive lineage4.1.2.1 None
SRR12420264 Pre-XDR-TB lineage2.2.1 None
ERR4813147 Pre-XDR-TB lineage4.1.1 None
SRR21277225 Sensitive lineage2.2.1 None
ERR11069089 Sensitive lineage4.7 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR24256206 HR-TB lineage2.2.1 None
SRR13870373 Pre-XDR-TB lineage4.1.1 None
ERR4817091 Sensitive lineage3.1.2.1 gb
ERR7911340 Pre-XDR-TB lineage4.1.1 pe
ERR8975619 HR-TB lineage4.4.1.1 None
SRR12142366 Pre-XDR-TB lineage2.2.1 None
SRR10808814 MDR-TB lineage4.1.1 None
ERR12268355 Sensitive lineage4.3.1 None
ERR1035310 MDR-TB lineage4.6.4 br
ERR4813150 Pre-XDR-TB lineage4.1.1 None
ERR4820791 Sensitive lineage3.1.2.1 gb
SRR7755717 Pre-XDR-TB lineage2.2.1 None
SRR1723466 HR-TB lineage2.2.1 cn
ERR7911341 MDR-TB lineage4.1.1 pe
ERR330697 Other lineage4.4.1.1 None
ERR4798179 HR-TB lineage3 in
ERR10748138 Pre-XDR-TB lineage2.2.2;lineage4.4.1.1 None
ERR4819335 Sensitive lineage3.1.2.1 None
ERR6866677 Sensitive lineage4.3.2 None
ERR2517017 MDR-TB lineage3 gb
SRR21685243 Sensitive lineage1.2.1.2.1 None
SRR6484901 MDR-TB lineage2.2.1 None
ERR2179847 Sensitive lineage3 None
SRR28240177 Sensitive lineage4.1.2.1 None
SRR22461582 MDR-TB lineage4.1.1 None
ERR2510455 MDR-TB lineage3 pk
ERR4810901 Sensitive lineage4.4.2 cn
ERR775385 Pre-XDR-TB lineage4.1.1.3 pe
ERR3063118 RR-TB lineage4.4.1.1 None
ERR5918053 HR-TB lineage4.4.1.1 za
ERR182003 Sensitive lineage4.3.3 mw
SRR13870369 Pre-XDR-TB lineage4.1.1 None
ERR3148038 Pre-XDR-TB lineage4.9 None
SRR6824417 Sensitive lineage2.2.1 cn
SRR6824521 MDR-TB lineage2.2.1 cn
ERR4799772 Other lineage3.1.2.1 None
ERR2515573 Pre-XDR-TB lineage4.4.1.1 za
ERR9992888 XDR-TB lineage4.4.1.1 None
ERR4809292 MDR-TB lineage4.4.1.1 za
ERR11465638 Sensitive lineage4.3.2.1 None
SRR25515616 Sensitive lineage2.2.1.1 None
SRR22249891 Sensitive lineage4.5 None
ERR2503450 HR-TB lineage4.5 None
SRR24035839 MDR-TB lineage2.2.1 None
DRR130189 Pre-XDR-TB lineage2.2.1 None
ERR4800358 HR-TB lineage3 in
ERR2184684 MDR-TB lineage4.1.1 pe
ERR4813591 MDR-TB lineage4.1.1 None
SRR16058004 Sensitive lineage3 None
SRR16370329 HR-TB lineage4.5 None
ERR8975010 MDR-TB lineage4.4.1.1 None
SRR6280341 Sensitive lineage2.2.1 cn
SRR18213941 Other lineage4.4.1.1 None
ERR4797287 MDR-TB lineage3 in
ERR7910876 MDR-TB lineage4.1.1 None
ERR4811706 Sensitive lineage4.1.2.1 pe
ERR10748441 MDR-TB lineage4.4.1.1 None
ERR9992910 XDR-TB lineage4.4.1.1 None
SRR13870381 Pre-XDR-TB lineage4.1.1 None
SRR25534373 Sensitive lineage2.2.1 None
ERR3063124 Sensitive lineage4.4.1.1 None
ERR4812985 MDR-TB lineage4.1.1 pe
ERR4972575 XDR-TB lineage4.3.3;lineage4.4.1.1 None
SRR6484848 Other lineage4.1.2.1 None
SRR6280271 Sensitive lineage2.2.1 cn
ERR9125738 Sensitive lineage3 None
ERR9786395 Sensitive lineage4.7 None
ERR4813616 MDR-TB lineage4.3.2 None
SRR26112434 Sensitive lineage4.8 None
SRR7645887 MDR-TB lineage2.2.1 None
SRR18054780 MDR-TB lineage2.2.1 None
ERR10762311 Pre-XDR-TB lineage2.2.1;lineage4.2.1 None
SRR2101135 Other lineage4.4.1.1 None
ERR6866612 Other lineage4.3.3 None
ERR4813021 MDR-TB lineage4.1.1 None
SRR2024924 MDR-TB lineage2.2.1 cn
ERR4815341 Sensitive lineage3.1.2.1 gb
ERR7910877 MDR-TB lineage4.1.1 None
ERR4813137 Pre-XDR-TB lineage4.1.1 None
SRR28046330 Pre-XDR-TB lineage3 None
SRR28046148 Sensitive lineage1.1.2 None
SRR22461690 MDR-TB lineage4.1.1 None
ERR3335739 Pre-XDR-TB lineage3 pk
ERR3335743 Pre-XDR-TB lineage3 pk
ERR2179781 Sensitive lineage4.5 cn
SRR10040312 MDR-TB lineage2.2.1 None
SRR21576685 MDR-TB lineage4.5 None