Rv3862c - c.-79T>G


Drug resistance types
83 Sensitive 6 RR-TB 14 HR-TB 52 MDR-TB 31 Pre-XDR-TB 3 XDR-TB 4 Other
lineage Counts
lineage Count
lineage2.2.1 51
lineage4.3.2 34
lineage4.3.3 27
lineage4.8 12
lineage4.3.4.1 4
lineage4.1.2.1 10
lineage3 6
lineage4.1.1.3 3
lineage3.1.2.1 3
lineage2.2.1.1 4
lineage4.4.2 3
lineage4.3.4.2.1 4
lineage4.3.4.2 8
lineage4.6.1.1 2
lineage4.5 2
lineage2.2.2 3
lineage2.1 2
lineage2.2.1;lineage3 1
lineage4.3.1 1
lineage4.1.3 1
lineage4.9 5
lineage4.6.1.2 1
lineage4.1 1
lineage4.3.4 1
lineage4.6 1
lineage4.7 2
lineage4.1.1.1 1
spoligotype Counts
spoligotype Count
None 193
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4822326 MDR-TB lineage2.2.1 de
SRR10808699 Sensitive lineage4.3.2 None
SRR29053013 Sensitive lineage4.3.3 None
ERR133985 HR-TB lineage4.3.3 ru
ERR4024782 Sensitive lineage4.3.2 None
SRR18715111 Pre-XDR-TB lineage4.8 None
ERR4813966 MDR-TB lineage4.3.4.1 br
ERR6866876 Sensitive lineage4.1.2.1 None
SRR11972350 MDR-TB lineage2.2.1 None
SRR12882774 MDR-TB lineage3 None
SRR18911913 Sensitive lineage4.3.3 None
SRR28239466 Sensitive lineage4.3.3 None
SRR28351163 XDR-TB lineage2.2.1 None
ERR7911334 MDR-TB lineage2.2.1 vn
ERR2707126 MDR-TB lineage4.1.1.3 cd
ERR779867 HR-TB lineage4.3.2 pe
ERR9121743 HR-TB lineage4.3.2 None
ERR1035163 Sensitive lineage4.3.3 sa
ERR4830980 MDR-TB lineage3.1.2.1 np
ERR067708 Sensitive lineage4.8 ru
ERR2510130 HR-TB lineage4.3.2 pe
ERR2184555 Sensitive lineage4.3.2 pe
ERR4829811 Sensitive lineage4.8 it
ERR5917742 HR-TB lineage4.8 by
ERR4815077 Other lineage2.2.1.1 gb
ERR2513240 MDR-TB lineage2.2.1 gb
SRR16370337 Sensitive lineage4.3.3 None
SRR5067384 HR-TB lineage4.4.2 vn
SRR29094033 Sensitive lineage4.3.4.2.1 None
SRR27241220 MDR-TB lineage2.2.1 None
SRR28339295 Pre-XDR-TB lineage2.2.1 None
ERR11044066 RR-TB lineage2.2.1 None
ERR13291616 Sensitive lineage4.3.4.2 None
ERR4024942 Sensitive lineage4.3.3 None
ERR3256134 MDR-TB lineage4.3.4.1 ph
SRR7069701 MDR-TB lineage2.2.1 None
ERR5864907 Pre-XDR-TB lineage2.2.1 None
ERR970451 RR-TB lineage4.1.2.1 None
ERR970452 RR-TB lineage4.1.2.1 None
ERR6865803 Sensitive lineage4.3.2 None
SRR25206909 Pre-XDR-TB lineage2.2.1 None
ERR6866933 Sensitive lineage4.3.2 None
ERR1199043 Sensitive lineage4.6.1.1 ug
ERR2513895 Sensitive lineage4.8 None
ERR13430440 Pre-XDR-TB lineage2.2.1 None
ERR13430444 Pre-XDR-TB lineage2.2.1 None
ERR4800394 Pre-XDR-TB lineage2.2.1.1 in
SRR21277370 Sensitive lineage4.5 None
ERR11082819 MDR-TB lineage4.8 None
SRR7276685 Sensitive lineage4.3.4.1 None
SRR20969764 Other lineage2.2.1 None
SRR20632826 Pre-XDR-TB lineage2.2.1 None
ERR1199014 Sensitive lineage4.6.1.1 ug
SRR21676928 Sensitive lineage4.1.2.1 None
SRR29093623 Sensitive lineage4.3.4.2.1 None
ERR9993004 XDR-TB lineage2.2.2 None
SRR10305980 MDR-TB lineage2.2.1 None
SRR10185946 Pre-XDR-TB lineage2.1 None
ERR5864853 Pre-XDR-TB lineage2.2.1 None
SRR10305778 Sensitive lineage2.2.1 None
SRR25827665 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR4811125 Sensitive lineage4.5 cn
SRR29126375 Sensitive lineage4.8 None
ERR13292321 Sensitive lineage4.3.4.2 None
ERR13430445 Pre-XDR-TB lineage2.2.1 None
ERR4811673 Sensitive lineage4.3.2 pe
SRR25340852 Sensitive lineage3.1.2.1 None
ERR6865983 Sensitive lineage4.3.2 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR4831131 Sensitive lineage4.1.2.1 de
ERR3014597 MDR-TB lineage4.3.1 tn
SRR29231743 MDR-TB lineage4.1.1.3 None
ERR5864852 Pre-XDR-TB lineage2.2.1 None
ERR10680116 MDR-TB lineage4.1.3 None
SRR29231550 MDR-TB lineage4.9 None
ERR4011987 Sensitive lineage4.3.4.2.1 None
SRR28859769 Sensitive lineage4.3.4.2 None
SRR28646100 MDR-TB lineage4.8 None
SRR28339296 Pre-XDR-TB lineage2.2.1 None
SRR28706409 HR-TB lineage2.2.1 None
SRR10305747 RR-TB lineage2.2.1 None
SRR11662326 Pre-XDR-TB lineage2.1 None
SRR16370539 MDR-TB lineage2.2.1 None
SRR2100385 MDR-TB lineage3 None
ERR2516520 Sensitive lineage4.3.2 pe
ERR4811889 Sensitive lineage4.3.2 pe
ERR4812392 Sensitive lineage4.3.2 pe
SRR16370546 MDR-TB lineage2.2.1 None
SRR16088503 Sensitive lineage4.3.3 None
ERR4796823 MDR-TB lineage2.2.1.1 in
SRR10808957 Sensitive lineage4.3.2 None
ERR1035276 MDR-TB lineage4.3.3 br
SRR1723792 MDR-TB lineage2.2.1 cn
ERR8975635 HR-TB lineage4.1.1.3 None
ERR11044383 Sensitive lineage4.3.2 None
ERR4811860 Sensitive lineage4.3.2 pe
SRR25207309 Pre-XDR-TB lineage2.2.1 None
SRR22251139 Sensitive lineage4.8 None
SRR23862168 Sensitive lineage4.3.3 None
ERR5864856 Pre-XDR-TB lineage2.2.1 None
SRR12142417 Pre-XDR-TB lineage2.2.1 None
ERR4831071 MDR-TB lineage3 np
ERR4828988 RR-TB lineage4.3.4.2 None
ERR5864855 Pre-XDR-TB lineage2.2.1 None
ERR2184327 Sensitive lineage4.3.2 None
SRR28409461 Sensitive lineage4.3.4.2 None
SRR22250208 Sensitive lineage2.2.1 None
SRR28859776 Sensitive lineage4.3.4.2 None
SRR24223029 HR-TB lineage4.3.3 None
ERR5864857 Pre-XDR-TB lineage2.2.1 None
SRR7276714 Sensitive lineage4.3.4.1 None
SRR5152915 Sensitive lineage4.8 None
SRR28858429 MDR-TB lineage2.2.1 None
ERR11044121 Sensitive lineage4.3.2 None
SRR6824403 MDR-TB lineage2.2.1 cn
ERR2179755 HR-TB lineage4.4.2 cn
ERR9121690 Sensitive lineage4.3.3 None
SRR9224924 Sensitive lineage4.3.3 None
ERR6865409 Sensitive lineage4.3.2 None
ERR6866644 Sensitive lineage4.3.2 None
SRR15399222 Other lineage4.1.2.1 None
DRR130108 MDR-TB lineage4.3.3 None
SRR28858564 Sensitive lineage4.3.2 None
ERR6865959 Sensitive lineage4.3.2 None
ERR2707155 MDR-TB lineage4.9 cd
SRR28859931 Sensitive lineage4.9 None
ERR6358773 MDR-TB lineage4.6.1.2 None
ERR2707006 MDR-TB lineage4.9 cd
ERR5864850 Pre-XDR-TB lineage2.2.1 None
SRR29231301 MDR-TB lineage4.9 None
SRR24256316 MDR-TB lineage4.3.3 None
ERR4799150 HR-TB lineage3 in
SRR11662436 MDR-TB lineage2.2.1 None
ERR4195267 Sensitive lineage4.3.3 None
ERR6866762 Sensitive lineage4.3.2 None
SRR20969892 MDR-TB lineage2.2.2 None
SRR21658527 Sensitive lineage2.2.1 None
SRR5153907 MDR-TB lineage4.1 None
SRR25340751 Sensitive lineage3.1.2.1 None
ERR7911326 MDR-TB lineage2.2.1 vn
ERR2677430 MDR-TB lineage2.2.1 de
ERR2516464 MDR-TB lineage4.1.2.1 pe
ERR4813434 HR-TB lineage4.3.4 pe
ERR4818768 MDR-TB lineage4.3.3 gb
SRR7516312 Pre-XDR-TB lineage2.2.1 None
SRR25827367 MDR-TB lineage2.2.1.1 None
SRR29056240 Sensitive lineage4.3.3 None
ERR11044513 Sensitive lineage4.3.2 None
ERR4831414 MDR-TB lineage2.2.1 de
SRR21732980 Other lineage4.3.3 None
SRR26112829 Sensitive lineage2.2.1 None
ERR4024865 Sensitive lineage4.3.2 None
SRR28393630 MDR-TB lineage4.1.2.1 None
ERR5864849 Pre-XDR-TB lineage2.2.1 None
ERR5864858 Pre-XDR-TB lineage2.2.1 None
SRR10808670 Pre-XDR-TB lineage4.3.2 None
ERR117734 MDR-TB lineage3 None
ERR6866117 Sensitive lineage4.3.2 None
SRR12420558 MDR-TB lineage2.2.1 None
ERR11050961 Sensitive lineage4.6 None
ERR5864859 Pre-XDR-TB lineage2.2.1 None
ERR4195406 HR-TB lineage4.3.2 None
ERR11050596 Sensitive lineage4.8 None
SRR28045217 MDR-TB lineage3 None
SRR23861859 Sensitive lineage4.3.3 None
ERR6866684 Sensitive lineage4.3.2 None
ERR3132168 MDR-TB lineage4.3.2 None
ERR11044120 Sensitive lineage4.3.2 None
ERR9993005 XDR-TB lineage2.2.2 None
ERR4024771 Sensitive lineage4.3.2 None
SRR29055392 Sensitive lineage2.2.1 None
SRR18911588 Sensitive lineage4.3.4.2 None
SRR29539503 Pre-XDR-TB lineage4.7 None
ERR4011937 Sensitive lineage4.3.4.2.1 None
ERR13267502 MDR-TB lineage2.2.1 None
ERR13276361 MDR-TB lineage4.8 None
ERR13260105 MDR-TB lineage4.3.3 None
ERR5864851 Pre-XDR-TB lineage2.2.1 None
SRR19325680 Sensitive lineage4.3.3 None
ERR4025148 Sensitive lineage4.3.2 None
ERR13292376 Sensitive lineage4.3.3 None
ERR972799 RR-TB lineage4.1.2.1 None
ERR5864860 Pre-XDR-TB lineage2.2.1 None
SRR29051471 Sensitive lineage4.1.2.1 None
ERR6865330 Sensitive lineage4.3.3 None
SRR22048415 Sensitive lineage4.7 None
ERR5864854 Pre-XDR-TB lineage2.2.1 None
ERR8699147 Sensitive lineage4.1.1.1 None
ERR13254266 MDR-TB lineage4.3.3 None
SRR29051529 Sensitive lineage4.3.3 None
ERR4812084 Sensitive lineage4.3.2 None
ERR3148200 MDR-TB lineage4.3.4.2 mx
SRR29356698 HR-TB lineage4.3.3 None