Rv3862c - c.-79_-78delTAinsC
Drug resistance types
44 Sensitive
5 RR-TB
1 HR-TB
27 MDR-TB
7 Pre-XDR-TB
2 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 1 |
| lineage4.3.3 | 24 |
| lineage2.2.1 | 24 |
| lineage4.5 | 4 |
| lineage4.3.2 | 8 |
| lineage4.8 | 8 |
| lineage4.9 | 4 |
| lineage2.2.2 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.3.4.1 | 5 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage3 | 2 |
| lineage4.1.2.1;lineage4.3.3 | 2 |
| lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 90 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21277712 | Sensitive | lineage2.2.1.1 | None | ERR6879051 | MDR-TB | lineage4.3.3 | None | SRR671856 | Sensitive | lineage2.2.1 | cn | SRR29385469 | RR-TB | lineage2.2.1 | None | ERR751557 | MDR-TB | lineage4.3.3 | pe | ERR751614 | MDR-TB | lineage4.3.3 | pe | SRR6824612 | MDR-TB | lineage2.2.1 | cn | ERR12117895 | MDR-TB | lineage4.3.3 | None | SRR25515492 | Sensitive | lineage2.2.1 | None | SRR12420526 | RR-TB | lineage4.5 | None | ERR894427 | Sensitive | lineage4.3.2 | None | ERR1034803 | MDR-TB | lineage4.3.3 | pe | SRR28859696 | Sensitive | lineage4.3.2 | None | SRR6832220 | Sensitive | lineage4.8 | None | SRR15316509 | Sensitive | lineage2.2.1 | None | ERR1034804 | MDR-TB | lineage4.3.3 | pe | SRR6896532 | Sensitive | lineage4.9 | None | SRR19226962 | Sensitive | lineage4.3.3 | None | SRR21728158 | Sensitive | lineage4.3.3 | None | ERR1035190 | Sensitive | lineage4.8 | pt | SRR5894886 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887743 | Pre-XDR-TB | lineage2.2.1 | None | ERR4024963 | MDR-TB | lineage4.3.3 | None | SRR16370591 | Pre-XDR-TB | lineage4.5 | None | ERR4827785 | MDR-TB | lineage2.2.1 | None | ERR13288792 | XDR-TB | lineage2.2.2 | None | ERR8699679 | Sensitive | lineage4.3.3 | None | ERR894431 | Sensitive | lineage4.3.2 | None | SRR16089683 | Sensitive | lineage2.2.1 | None | SRR10808768 | Sensitive | lineage4.1.2.1 | None | SRR1723715 | Sensitive | lineage2.2.1 | cn | ERR1193687 | Sensitive | lineage4.3.4.1 | sv | ERR6358870 | RR-TB | lineage4.6.1.1 | None | ERR4024620 | MDR-TB | lineage4.3.3 | None | SRR6896370 | Sensitive | lineage4.9 | None | SRR25827481 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR894428 | Sensitive | lineage4.3.2 | None | ERR779902 | MDR-TB | lineage4.3.3 | pe | ERR1034746 | Sensitive | lineage4.1.2.1 | pe | ERR6866577 | Sensitive | lineage4.3.2 | None | ERR11243593 | Sensitive | lineage4.8 | None | SRR28859708 | Sensitive | lineage4.3.2 | None | ERR1193721 | Sensitive | lineage4.3.4.1 | mx | SRR28239801 | HR-TB | lineage4.8 | None | SRR067552 | RR-TB | lineage2.2.1 | None | SRR10305789 | Other | lineage2.2.1 | None | ERR8699097 | Sensitive | lineage4.3.3 | None | ERR7361994 | MDR-TB | lineage2.2.1 | None | ERR894430 | Sensitive | lineage4.3.2 | None | SRR10869156 | MDR-TB | lineage2.2.1 | None | ERR6865539 | MDR-TB | lineage4.3.3 | None | SRR14807477 | Pre-XDR-TB | lineage2.2.1 | None | SRR22873605 | Pre-XDR-TB | lineage2.2.1 | None | SRR26112618 | Sensitive | lineage4.8 | None | ERR3148182 | MDR-TB | lineage2.2.1 | mx | ERR10748505 | MDR-TB | lineage2.2.1 | None | SRR19315458 | Pre-XDR-TB | lineage4.5 | None | ERR6865573 | MDR-TB | lineage4.3.3 | None | ERR4024945 | MDR-TB | lineage4.3.3 | None | SRR25534408 | Sensitive | lineage2.2.1 | None | SRR2100861 | Other | lineage3 | None | SRR12142429 | MDR-TB | lineage2.2.1 | None | SRR22873609 | XDR-TB | lineage2.2.1 | None | ERR12387300 | Sensitive | lineage4.3.4.1 | None | ERR1034805 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | pe | ERR2515843 | Sensitive | lineage4.9 | za | ERR270759 | Other | lineage3 | None | ERR2179735 | RR-TB | lineage4.2.2 | cn | SRR16370202 | Sensitive | lineage4.3.3 | None | ERR6865709 | MDR-TB | lineage4.3.3 | None | ERR894429 | Sensitive | lineage4.3.2 | None | SRR21240046 | Sensitive | lineage4.1.2.1 | None | ERR11465210 | Sensitive | lineage4.3.4.1 | None | ERR7737938 | MDR-TB | lineage2.2.1 | None | SRR18912553 | Sensitive | lineage2.2.1 | None | DRR184666 | Sensitive | lineage4.3.3 | vn | ERR6879053 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | None | ERR775367 | MDR-TB | lineage4.3.3 | pe | ERR4813240 | Sensitive | lineage2.2.1 | pe | SRR27980482 | Sensitive | lineage4.3.3 | None | ERR3287434 | MDR-TB | lineage4.3.3 | pe | ERR751598 | MDR-TB | lineage4.3.3 | pe | ERR6879052 | MDR-TB | lineage4.3.3 | None | SRR6480374 | Sensitive | lineage4.1.2.1 | None | SRR12420339 | Sensitive | lineage4.5 | None | ERR11082970 | Sensitive | lineage4.8 | None | ERR4813880 | Other | lineage4.8 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR4813812 | Sensitive | lineage4.3.4.1 | br | ERR2515668 | Sensitive | lineage4.9 | za |
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