Rv3862c - c.49A>C


Drug resistance types
32 Sensitive 1 RR-TB 4 HR-TB 35 MDR-TB 45 Pre-XDR-TB 0 XDR-TB 8 Other
lineage Counts
lineage Count
lineage2.2.1 69
lineage4.3.3 4
lineage4.1.2.1 3
lineage2.2 2
lineage4.3.2;lineage2.2.1 1
lineage4.3.3;lineage2.2.1 1
lineage4.2.2.2 3
lineage4 2
lineage4.7;lineage2.2.1 3
lineage3 2
lineage4.6.2.2 3
lineage4.8 5
lineage2.2.2 5
lineage2 1
lineage4.1.2 2
lineage4.9 1
lineage4.2.1;lineage2.2.1 1
lineage3.1.1 1
lineage1.1.2 2
lineage4.6.1.1 1
lineage4.5 1
lineage4.8;lineage4.1.2.1 1
lineage2.2.1.1 5
lineage2.2.1.2 1
lineage4.2.1 1
lineage4.3.4.2 2
lineage4.1.4 1
lineage4.4.1.1 1
spoligotype Counts
spoligotype Count
None 125
Geographic prevalence
Country level data for this variant is available for 57 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR23862151 HR-TB lineage2.2.1 None
ERR4812705 Pre-XDR-TB lineage2.2.1 pe
SRR21031703 Sensitive lineage2.2.1 None
ERR4815373 Sensitive lineage4.3.3 None
ERR4813067 Pre-XDR-TB lineage4.1.2.1 pe
ERR4812839 MDR-TB lineage2.2 None
ERR4812905 MDR-TB lineage2.2.1 pe
ERR4812913 MDR-TB lineage2.2.1 None
ERR4813042 Pre-XDR-TB lineage2.2.1 pe
ERR4813078 Pre-XDR-TB lineage2.2.1 pe
ERR4813207 Pre-XDR-TB lineage2.2.1 pe
ERR4813162 Pre-XDR-TB lineage2.2.1 pe
ERR4813188 Pre-XDR-TB lineage4.3.2;lineage2.2.1 pe
ERR4813155 Pre-XDR-TB lineage2.2.1 pe
ERR4813153 MDR-TB lineage2.2.1 None
ERR4813170 Pre-XDR-TB lineage2.2.1 pe
ERR4813175 Pre-XDR-TB lineage2.2.1 pe
ERR4813180 Pre-XDR-TB lineage4.3.3;lineage2.2.1 pe
ERR4813204 Pre-XDR-TB lineage2.2.1 pe
ERR4813214 MDR-TB lineage2.2.1 pe
ERR4813398 MDR-TB lineage2.2.1 pe
ERR4813351 Pre-XDR-TB lineage2.2 None
ERR11049630 Sensitive lineage4.2.2.2 None
ERR4813574 Pre-XDR-TB lineage2.2.1 None
ERR2124101 MDR-TB lineage2.2.1 None
ERR2184216 Sensitive lineage4 pe
ERR2184245 Pre-XDR-TB lineage4.7;lineage2.2.1 None
ERR2510537 Other lineage3 pk
ERR2184241 MDR-TB lineage2.2.1 pe
ERR4817450 Sensitive lineage4.6.2.2 gb
ERR2516697 MDR-TB lineage2.2.1 pe
ERR2510592 Pre-XDR-TB lineage4.6.2.2 pk
SRR5067387 Other lineage2.2.1 vn
ERR2514017 Sensitive lineage4.8 gb
SAMEA2533546 HR-TB lineage2.2.1 uz
ERR2516624 MDR-TB lineage2.2.1 pe
SRR1723619 Pre-XDR-TB lineage2.2.1 cn
SRR1723538 MDR-TB lineage2.2.1 cn
ERR4822587 Pre-XDR-TB lineage2.2.1 tm
ERR279491 Other lineage2.2.2 None
ERR4822591 Pre-XDR-TB lineage2.2.1 tm
ERR4822590 Pre-XDR-TB lineage2.2.1 tm
ERR4822588 Pre-XDR-TB lineage2.2.1 tm
ERR4830586 Pre-XDR-TB lineage2.2.1 tm
ERR4830604 MDR-TB lineage2.2.1 tm
ERR4830587 Pre-XDR-TB lineage2.2.1 tm
ERR4830591 MDR-TB lineage2.2.1 tm
SRR6824379 Pre-XDR-TB lineage2.2.1 cn
ERR4830621 MDR-TB lineage2.2.1 tm
ERR4830268 Sensitive lineage2.2.1 vn
ERR1633791 Other lineage2.2.2 za
SRR6896296 RR-TB lineage2 None
ERR4830209 Sensitive lineage2.2.1 vn
SRR6484957 Sensitive lineage4.8 None
SRR6785528 Sensitive lineage4.8 None
SRR9588566 Sensitive lineage4.1.2 None
SRR6824694 MDR-TB lineage2.2.1 cn
ERR495022 Other lineage2.2.2 None
SRR7131166 Sensitive lineage4.9 None
ERR3287433 MDR-TB lineage2.2.1 pe
SRR7645874 MDR-TB lineage4.2.1;lineage2.2.1 None
SRR7653001 MDR-TB lineage2.2.1 None
DRR188726 Sensitive lineage2.2.2 None
ERR1034711 MDR-TB lineage4.1.2.1 pe
SRR7535063 Sensitive lineage3.1.1 None
ERR11044606 MDR-TB lineage4.6.2.2 None
ERR3287837 Pre-XDR-TB lineage2.2.1 pe
ERR3287584 Pre-XDR-TB lineage2.2.1 None
ERR3287741 MDR-TB lineage2.2.1 pe
ERR4024907 Pre-XDR-TB lineage2.2.1 None
ERR3287843 Pre-XDR-TB lineage2.2.1 pe
ERR4195318 Sensitive lineage1.1.2 None
ERR4798124 Pre-XDR-TB lineage2.2.1 in
ERR4796771 Pre-XDR-TB lineage2.2.1 in
ERR4797794 MDR-TB lineage2.2.1 in
ERR4553987 Pre-XDR-TB lineage2.2.1 None
ERR4798714 Pre-XDR-TB lineage2.2.1 in
ERR4798715 Pre-XDR-TB lineage2.2.1 in
ERR6358722 MDR-TB lineage4.6.1.1 None
ERR4810778 Sensitive lineage2.2.1 cn
ERR4800183 Sensitive lineage3 None
ERR4810926 MDR-TB lineage2.2.1 cn
ERR4810989 MDR-TB lineage2.2.1 cn
ERR4811368 Pre-XDR-TB lineage4.5 cn
ERR7737882 MDR-TB lineage4.2.2.2 None
ERR6866374 Sensitive lineage4.3.3 None
ERR751623 MDR-TB lineage4.3.3 pe
ERR6865428 Pre-XDR-TB lineage2.2.1 None
ERR7737745 MDR-TB lineage4.2.2.2 None
ERR9119221 Sensitive lineage2.2.1 None
ERR9029917 Pre-XDR-TB lineage4.7;lineage2.2.1 None
ERR775382 Pre-XDR-TB lineage2.2.1 pe
SRR10808431 Sensitive lineage4 None
ERR9121250 Sensitive lineage1.1.2 None
ERR11050170 Sensitive lineage4.1.2.1 None
SRR10305996 MDR-TB lineage2.2.1 None
SRR10380172 Sensitive lineage4.8;lineage4.1.2.1 None
SRR10808404 MDR-TB lineage2.2.1 None
SRR10808400 Pre-XDR-TB lineage4.7;lineage2.2.1 None
ERR9119242 Sensitive lineage2.2.1 None
SRR13870366 Pre-XDR-TB lineage2.2.1 None
SRR10869080 Sensitive lineage2.2.1.1 None
SRR10869305 Sensitive lineage4.8 None
SRR11972345 MDR-TB lineage2.2.1.1 None
SRR13180330 HR-TB lineage4.3.3 None
SRR10869078 Pre-XDR-TB lineage2.2.2 None
SRR15315788 HR-TB lineage2.2.1.2 None
SRR13870406 Pre-XDR-TB lineage2.2.1 None
SRR13870426 Pre-XDR-TB lineage2.2.1 None
SRR14781907 Pre-XDR-TB lineage2.2.1 None
SRR14801551 Pre-XDR-TB lineage4.2.1 None
SRR14802246 Sensitive lineage4.8 None
SRR13870368 MDR-TB lineage2.2.1 None
SRR14718673 Other lineage4.1.2 None
SRR18054810 MDR-TB lineage2.2.1 None
SRR15316133 Sensitive lineage2.2.1.1 None
SRR16089406 Other lineage2.2.1 None
SRR16370282 Other lineage2.2.1 None
SRR19320530 Sensitive lineage4.3.4.2 None
SRR18714857 MDR-TB lineage2.2.1 None
SRR20139558 Pre-XDR-TB lineage4.1.4 None
SRR21277791 Sensitive lineage2.2.1.1 None
SRR21277610 Sensitive lineage2.2.1.1 None
ERR11082841 MDR-TB lineage4.4.1.1 None
SRR21657636 Sensitive lineage4.3.4.2 None