Rv3862c - p.Ala66Thr
Drug resistance types
12 Sensitive
1 RR-TB
0 HR-TB
114 MDR-TB
45 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 154 |
| lineage2.2 | 3 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.2 | 3 |
| lineage4;lineage2.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.3;lineage2.2.1 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.7 | 2 |
| lineage3 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.1.3 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 175 |
Geographic prevalence
Country level data for this variant is available for 38 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5864082 | MDR-TB | lineage2.2.1 | None | ERR5864084 | MDR-TB | lineage2.2.1 | None | ERR5864077 | MDR-TB | lineage2.2.1 | None | ERR5864076 | MDR-TB | lineage2.2.1 | None | ERR5864086 | MDR-TB | lineage2.2.1 | None | ERR5864081 | MDR-TB | lineage2.2.1 | None | ERR5864085 | MDR-TB | lineage2.2.1 | None | ERR5864083 | MDR-TB | lineage2.2 | None | ERR5864080 | MDR-TB | lineage2.2.1 | None | ERR5864089 | MDR-TB | lineage2.2.1 | None | ERR5864078 | MDR-TB | lineage2.2.1 | None | ERR5864079 | MDR-TB | lineage2.2.1 | None | ERR5864088 | MDR-TB | lineage2.2.1 | None | ERR5864087 | MDR-TB | lineage2.2.1 | None | ERR5864395 | MDR-TB | lineage2.2.1 | None | ERR5864393 | MDR-TB | lineage2.2.1 | None | ERR5864394 | MDR-TB | lineage2.2.1 | None | ERR5864397 | MDR-TB | lineage2.2.1 | None | ERR5864392 | MDR-TB | lineage2.2.1 | None | ERR5864398 | MDR-TB | lineage2.2.1 | None | ERR5864396 | MDR-TB | lineage2.2.1 | None | ERR5864399 | MDR-TB | lineage2.2.1 | None | ERR5865158 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865156 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911336 | MDR-TB | lineage2.2.1 | us | ERR5865201 | MDR-TB | lineage2.2.1 | None | ERR5865554 | MDR-TB | lineage2.2.1 | None | ERR5866485 | MDR-TB | lineage2.2.1 | None | ERR5866535 | MDR-TB | lineage2.2.1 | None | ERR5917666 | MDR-TB | lineage2.2.1 | by | ERR757150 | MDR-TB | lineage4.1.2.1.1 | ar | ERR5865155 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865157 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865202 | MDR-TB | lineage2.2.1 | None | ERR5865494 | MDR-TB | lineage2.2.1 | None | ERR5865495 | MDR-TB | lineage2.2.1 | None | ERR5865553 | MDR-TB | lineage2.2.1 | None | ERR5865921 | MDR-TB | lineage2.2.1 | None | ERR5865955 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866153 | MDR-TB | lineage2.2 | None | ERR5866151 | MDR-TB | lineage2.2.1 | None | ERR5866152 | MDR-TB | lineage2.2.1 | None | ERR5866228 | MDR-TB | lineage2.2.1 | None | ERR5866484 | MDR-TB | lineage2.2.1 | None | ERR5866534 | MDR-TB | lineage2.2.1 | None | ERR11050155 | MDR-TB | lineage2.2.1 | None | ERR9030411 | Sensitive | lineage1.1.2 | None | ERR7911405 | MDR-TB | lineage2.2.1 | us | ERR9030492 | Sensitive | lineage1.1.2 | None | SRR10303352 | MDR-TB | lineage2.2.1 | None | SRR10397145 | MDR-TB | lineage2.2.1 | None | SRR10397131 | MDR-TB | lineage2.2.1 | None | SRR1144804 | MDR-TB | lineage4;lineage2.2 | None | SRR10430378 | MDR-TB | lineage2.2.1 | None | SRR10397232 | MDR-TB | lineage2.2.1 | None | SRR1144763 | MDR-TB | lineage2.2.1 | None | SRR1163367 | MDR-TB | lineage2.2.1 | None | SRR1146333 | MDR-TB | lineage2.2.1 | None | SRR1146278 | MDR-TB | lineage4;lineage2.2.1 | None | SRR1162891 | MDR-TB | lineage2.2.1 | None | SRR1163400 | MDR-TB | lineage2.2.1 | None | SRR1166145 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882549 | Sensitive | lineage1.1.2 | None | SRR1166909 | MDR-TB | lineage2.2.1 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169151 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088575 | Pre-XDR-TB | lineage2.2.1 | None | SRR13243557 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801756 | MDR-TB | lineage2.2.1 | None | SRR15014762 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088222 | MDR-TB | lineage2.2.1 | None | SRR18715120 | MDR-TB | lineage2.2.1 | None | SRR18714785 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714922 | Pre-XDR-TB | lineage2.2.1 | None | SRR19276628 | MDR-TB | lineage4.3.3 | None | SRR18715140 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715461 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | SRR18715201 | MDR-TB | lineage2.2.1 | None | SRR18715462 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | SRR18715488 | MDR-TB | lineage2.2.1 | None | SRR19050359 | MDR-TB | lineage2.2.1 | None | SRR21277770 | Other | lineage2.2.1.1 | None | SRR21277763 | Other | lineage2.2.1 | None | SRR21277756 | Sensitive | lineage2.2.1.1 | None | ERR11068766 | Pre-XDR-TB | lineage2.2.1 | None | SRR3082106 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068891 | MDR-TB | lineage2.2.1 | None | ERR11082778 | MDR-TB | lineage2.2.1 | None | ERR11083085 | Pre-XDR-TB | lineage2.2.1 | None | ERR11080916 | MDR-TB | lineage2.2.1 | None | ERR11080967 | MDR-TB | lineage2.2.1 | None | SRR23861770 | Pre-XDR-TB | lineage2.2.1 | None | ERR158616 | Pre-XDR-TB | lineage2.2.1 | ru | SAMN02584649 | Pre-XDR-TB | lineage2.2.1 | md | ERR2446442 | Sensitive | lineage4.7 | nl | SRR1723469 | MDR-TB | lineage2.2.1 | cn | SRR3105758 | MDR-TB | lineage3 | None | ERR3275688 | Sensitive | lineage4.7 | nl | ERR2510719 | Pre-XDR-TB | lineage2.2.1 | it | ERR228062 | Pre-XDR-TB | lineage2.2.1 | ru | SAMN02414889 | MDR-TB | lineage2.2.1 | se | ERR2510655 | MDR-TB | lineage2.2.1 | it | SRR5149238 | Pre-XDR-TB | lineage2.2.1 | None | SRR5073562 | Sensitive | lineage2.2.2 | vn | SAMN02414880 | MDR-TB | lineage2.2.1 | se | ERR234658 | MDR-TB | lineage2.2.1 | ru | SAMEA2534567 | MDR-TB | lineage2.2.1 | None | ERR2510715 | MDR-TB | lineage2.2.1 | it | ERR550670 | MDR-TB | lineage2.2.1 | None | ERR4818773 | Sensitive | lineage2.2.1 | gb | SAMEA2534314 | Pre-XDR-TB | lineage2.2.1 | ru | SRR5153711 | Pre-XDR-TB | lineage2.2.1 | None | ERR11067192 | Sensitive | lineage3.1.2 | None | SRR5152957 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153093 | MDR-TB | lineage2.2.1 | None | SRR5266534 | Pre-XDR-TB | lineage2.2.1 | ru | SRR5153814 | Pre-XDR-TB | lineage2.2.1 | None | SRR5266544 | Pre-XDR-TB | lineage2.2.1 | ru | SRR5266541 | MDR-TB | lineage2.2.1 | ru | SRR5266557 | MDR-TB | lineage2.2.1 | ru | SRR5266551 | Pre-XDR-TB | lineage2.2.1 | ru | ERR552219 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515876 | Sensitive | lineage4.1.1.3 | None | ERR4829384 | Pre-XDR-TB | lineage2.2.1 | it | SRR23340100 | MDR-TB | lineage2.2 | None | ERR4827866 | MDR-TB | lineage2.2.1 | None | ERR2041760 | MDR-TB | lineage2.2.1 | rs | ERR4822417 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827431 | MDR-TB | lineage2.2.1 | None | ERR4827485 | MDR-TB | lineage2.2.1 | None | ERR4822378 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830025 | Pre-XDR-TB | lineage2.2.1 | None | ERR2677414 | MDR-TB | lineage2.2.1 | de | ERR4830062 | MDR-TB | lineage2.2.1 | None | ERR4829704 | MDR-TB | lineage2.2.1 | it | ERR4830746 | MDR-TB | lineage2.2.1 | ir | ERR4828969 | Pre-XDR-TB | lineage2.2.1 | None | SRR6484997 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829845 | MDR-TB | lineage2.2.1 | it | SRR6485119 | MDR-TB | lineage2.2.1 | None | SRR6485000 | Sensitive | lineage2.2.1 | None | SRR6256970 | Pre-XDR-TB | lineage2.2.1 | None | SRR6484896 | Sensitive | lineage2.2.1 | None | SRR6257057 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257009 | MDR-TB | lineage2.2.1 | ru | ERR4831181 | MDR-TB | lineage2.2.1 | de | ERR4831269 | MDR-TB | lineage2.2.1 | de | SRR6832015 | MDR-TB | lineage2.2.1 | None | SRR6785150 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832154 | MDR-TB | lineage2.2.1 | None | SRR6832038 | RR-TB | lineage2.2.1 | None | SRR6832224 | MDR-TB | lineage2.2.1 | None | SRR6832371 | MDR-TB | lineage2.2.1 | None | SRR6832348 | MDR-TB | lineage2.2.1 | None | SRR6832334 | MDR-TB | lineage2.2.1 | None | SRR8237402 | MDR-TB | lineage2.2.1 | us | SRR6824456 | MDR-TB | lineage2.2.1 | cn | SRR6855952 | Other | lineage4.1.1.3 | None | SRR6831752 | MDR-TB | lineage2.2.1 | None | SRR7796665 | MDR-TB | lineage2.2.1 | None | SRR7655790 | MDR-TB | lineage2.2.1 | None | SRR7657757 | MDR-TB | lineage2.2.1 | None | ERR11043364 | MDR-TB | lineage2.2.1 | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None | ERR027451 | Pre-XDR-TB | lineage2.2.1 | ru | ERR11043108 | MDR-TB | lineage2.2.1 | None | ERR067647 | MDR-TB | lineage2.2.1 | ru | ERR11043074 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044026 | MDR-TB | lineage2.2.1 | None | ERR11043586 | MDR-TB | lineage2.2.1 | None | ERR144567 | Pre-XDR-TB | lineage2.2.1 | ru | ERR11044260 | MDR-TB | lineage2.2.1 | None | ERR11044532 | MDR-TB | lineage2.2.1 | None | ERR3639805 | MDR-TB | lineage2.2.1 | None | ERR3639804 | Pre-XDR-TB | lineage2.2.1 | None |
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