Rv3862c - p.Cys53Arg
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
88 Sensitive
4 RR-TB
29 HR-TB
182 MDR-TB
232 Pre-XDR-TB
16 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 433 |
| lineage4.5 | 3 |
| lineage4.1.1.3 | 3 |
| lineage4.9 | 6 |
| lineage2.2.2 | 14 |
| lineage2.2.1;lineage4.3.3 | 5 |
| lineage2.1 | 3 |
| lineage4.3.2.1 | 1 |
| lineage3 | 22 |
| lineage2.2.1;lineage2.2.2 | 3 |
| lineage4.6.1.2 | 9 |
| lineage4.8 | 8 |
| lineage4 | 3 |
| La1.1;lineage3 | 1 |
| lineage4.1.1.1 | 8 |
| lineage4.3.4.2 | 2 |
| lineage4.7 | 3 |
| lineage4.3.3 | 5 |
| lineage2.2.1;lineage4.3.2.1 | 2 |
| lineage2.2.1.1 | 12 |
| lineage4.4 | 1 |
| lineage3.1.2 | 4 |
| lineage3.1.1 | 5 |
| lineage4.6.1.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1;lineage4.1.1.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4.2.2.2 | 2 |
| La2 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage2.2.1;lineage4.8.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 575 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10040354 | Pre-XDR-TB | lineage2.2.1 | None | SRR29094046 | MDR-TB | lineage2.2.1 | None | ERR1034644 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261389 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261224 | Pre-XDR-TB | lineage2.2.1 | None | ERR11489046 | MDR-TB | lineage2.2.1 | None | SRR29094019 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424732 | RR-TB | lineage4.5 | None | SRR29093562 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093263 | MDR-TB | lineage2.2.1 | None | ERR4799850 | Pre-XDR-TB | lineage2.2.1 | in | SRR29093840 | MDR-TB | lineage2.2.1 | None | ERR9806931 | MDR-TB | lineage4.1.1.3 | None | SRR6832241 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025626 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285222 | MDR-TB | lineage2.2.1 | None | ERR13252663 | Sensitive | lineage4.9 | None | ERR4800051 | MDR-TB | lineage2.2.2 | in | DRR188961 | Sensitive | lineage4.9 | None | SRR29096352 | MDR-TB | lineage2.2.1 | None | SRR8651655 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5987378 | MDR-TB | lineage2.2.1 | None | ERR4831535 | XDR-TB | lineage2.2.1 | None | SRR29096484 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748337 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR9119231 | HR-TB | lineage2.1 | None | ERR13195354 | MDR-TB | lineage2.2.2 | None | SRR671819 | Pre-XDR-TB | lineage2.2.1 | cn | SRR12420495 | Sensitive | lineage2.2.1 | None | SRR8651570 | Pre-XDR-TB | lineage2.2.1 | cn | ERR10748116 | MDR-TB | lineage2.2.1 | None | ERR5865970 | Pre-XDR-TB | lineage2.2.1 | None | ERR7162985 | Pre-XDR-TB | lineage2.2.1 | None | ERR11138656 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809261 | MDR-TB | lineage4.3.2.1 | za | ERR751973 | Other | lineage2.2.1 | th | ERR751988 | Other | lineage2.2.1 | th | SRR28706591 | MDR-TB | lineage2.2.1 | None | SRR28409329 | Pre-XDR-TB | lineage2.2.1 | None | ERR751816 | Other | lineage2.2.1 | th | SRR6153172 | Sensitive | lineage2.2.1 | ca | SRR6153253 | HR-TB | lineage3 | ca | ERR7911539 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911548 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911547 | Pre-XDR-TB | lineage2.2.1;lineage2.2.2 | za | ERR7911557 | Pre-XDR-TB | lineage2.2.1 | za | ERR2707095 | MDR-TB | lineage4.6.1.2 | cd | ERR7911611 | XDR-TB | lineage2.2.1 | za | ERR2707076 | MDR-TB | lineage4.6.1.2 | cd | ERR8025609 | Pre-XDR-TB | lineage2.2.1 | None | ERR11774978 | MDR-TB | lineage2.2.1 | None | ERR7911652 | MDR-TB | lineage2.2.1 | za | SRR9971120 | MDR-TB | lineage2.2.1 | None | ERR8975714 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011051 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975774 | MDR-TB | lineage2.2.1 | None | ERR11774833 | MDR-TB | lineage2.2.1 | None | SRR20969672 | Pre-XDR-TB | lineage2.2.1 | None | ERR067640 | Sensitive | lineage4.8 | ru | ERR7911647 | Pre-XDR-TB | lineage2.2.1 | za | ERR1873447 | Pre-XDR-TB | lineage2.2.1 | za | ERR1873556 | Pre-XDR-TB | lineage2.2.1 | za | ERR1873470 | Pre-XDR-TB | lineage2.2.1 | za | ERR1873474 | Pre-XDR-TB | lineage2.2.1 | za | ERR1873562 | Pre-XDR-TB | lineage2.2.1 | za | SRR1710081 | Other | lineage2.2.1 | cn | ERR2677415 | MDR-TB | lineage4 | de | SRR6280232 | Sensitive | lineage2.2.1 | cn | SRR5341378 | Other | lineage3 | in | SRR6824451 | MDR-TB | lineage2.2.1 | cn | ERR161071 | Sensitive | La1.1;lineage3 | mw | ERR5979417 | Pre-XDR-TB | lineage3 | None | ERR13288992 | Pre-XDR-TB | lineage2.2.2 | None | SRR29096347 | MDR-TB | lineage2.2.1 | None | SRR1181090 | Pre-XDR-TB | lineage2.2.1 | None | ERR12328190 | Other | lineage2.2.1 | None | ERR3794549 | MDR-TB | lineage2.2.1 | None | ERR10112905 | MDR-TB | lineage2.2.1 | None | SRR25515261 | Other | lineage2.2.1 | None | SRR29094002 | Pre-XDR-TB | lineage2.2.1 | None | SRR29052921 | Sensitive | lineage4.1.1.1 | None | ERR5865678 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261333 | XDR-TB | lineage4.3.4.2 | None | ERR13261392 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539262 | MDR-TB | lineage2.2.1 | None | ERR13242803 | MDR-TB | lineage2.2.1 | None | ERR4011077 | MDR-TB | lineage2.2.1 | None | ERR9119875 | MDR-TB | lineage2.2.1 | None | ERR10748099 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011076 | MDR-TB | lineage2.2.1 | None | ERR1873410 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827675 | HR-TB | lineage2.2.1 | None | SRR29231056 | Sensitive | lineage4.7 | None | SRR28044663 | Sensitive | lineage2.2.1 | None | ERR10748379 | MDR-TB | lineage2.2.1 | None | ERR13286098 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286097 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286117 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801914 | HR-TB | lineage2.2.1 | None | SRR29093696 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831584 | MDR-TB | lineage2.2.1 | None | SRR20969763 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062910 | HR-TB | lineage3 | None | SRR24710052 | MDR-TB | lineage2.2.1 | None | ERR4011058 | MDR-TB | lineage2.2.1 | None | ERR13262030 | XDR-TB | lineage2.2.1 | None | SRR21277144 | Sensitive | lineage2.2.1 | None | ERR13291866 | Pre-XDR-TB | lineage2.2.1 | None | SRR1140640 | HR-TB | lineage3 | None | SRR22137465 | Pre-XDR-TB | lineage2.2.1 | None | SRR26936988 | MDR-TB | lineage2.2.1 | None | SRR25827391 | Sensitive | lineage3 | None | SRR29093563 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093666 | Pre-XDR-TB | lineage2.2.1 | None | SRR29230791 | MDR-TB | lineage4.6.1.2 | None | SRR29096310 | MDR-TB | lineage2.2.1 | None | SRR29096668 | MDR-TB | lineage2.2.1 | None | ERR13260532 | MDR-TB | lineage4.3.3 | None | SRR13232617 | MDR-TB | lineage2.2.1 | None | SRR21277519 | HR-TB | lineage2.2.1 | None | ERR13266727 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723670 | Sensitive | lineage2.2.1 | cn | SRR29096337 | MDR-TB | lineage2.2.1 | None | SRR26399834 | HR-TB | lineage2.1 | None | SRR29093636 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040339 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040445 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869058 | MDR-TB | lineage2.2.1 | None | SRR29093283 | Pre-XDR-TB | lineage2.2.1;lineage4.3.2.1 | None | SRR22137420 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260562 | MDR-TB | lineage4.3.3 | None | ERR10112833 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR8025420 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112885 | MDR-TB | lineage2.2.1 | None | SRR15316314 | MDR-TB | lineage2.2.1 | None | SRR25515709 | Sensitive | lineage4.4 | None | SRR6485034 | Sensitive | lineage2.2.1 | None | SRR28859677 | Sensitive | lineage3.1.2 | None | SRR11567822 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773714 | Pre-XDR-TB | lineage2.2.2 | None | ERR4011065 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093314 | MDR-TB | lineage2.2.1 | None | SRR30180252 | MDR-TB | lineage4.5 | None | SRR29093617 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096856 | MDR-TB | lineage2.2.1 | None | SRR29017285 | Sensitive | lineage3.1.1 | None | ERR752034 | Sensitive | lineage2.2.1 | None | SRR29093548 | MDR-TB | lineage2.2.1 | None | SRR29096612 | MDR-TB | lineage2.2.1 | None | SRR29093568 | Pre-XDR-TB | lineage2.2.1 | None | SRR29052652 | Other | lineage2.2.1 | None | SRR29093256 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796388 | MDR-TB | lineage2.2.1 | in | SRR29094051 | Pre-XDR-TB | lineage2.2.1 | None | SRR29440582 | Sensitive | lineage4.6.1.1 | None | ERR4796872 | Pre-XDR-TB | lineage2.2.1 | in | SRR29093259 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040463 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797980 | Pre-XDR-TB | lineage2.2.1 | in | SRR11567811 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093628 | MDR-TB | lineage2.2.1 | None | ERR4799908 | Pre-XDR-TB | lineage3 | in | SRR20969645 | Pre-XDR-TB | lineage2.2.2 | None | ERR13265731 | Sensitive | lineage2.2.1 | None | SRR29096858 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799621 | Sensitive | lineage3.1.2.1 | in | ERR4799764 | Pre-XDR-TB | lineage2.2.1 | in | SRR29096839 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096351 | Pre-XDR-TB | lineage2.2.1 | None | SRR29385368 | Sensitive | lineage2.2.1 | None | SRR28868906 | Sensitive | lineage2.2.1 | None | SRR29093854 | MDR-TB | lineage2.2.1 | None | ERR4829277 | MDR-TB | lineage2.2.1 | None | ERR4800577 | Pre-XDR-TB | lineage2.2.1 | in | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | DRR034443 | Sensitive | lineage2.2.1 | None | ERR11466234 | Sensitive | lineage4.9 | None | SAMN02381020 | HR-TB | lineage3 | ug | ERR13266458 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653219 | MDR-TB | lineage4.1.1.1 | None | SRR29094075 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465274 | Sensitive | lineage4.9 | None | SRR29096596 | MDR-TB | lineage2.2.1 | None | ERR10112868 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR10748299 | MDR-TB | lineage2.2.1 | None | SRR22175269 | Pre-XDR-TB | lineage2.2.1 | None | ERR718490 | Sensitive | lineage2.2.1 | th | ERR718460 | Other | lineage2.2.1 | th | SRR25628599 | Sensitive | lineage2.2.1 | None | ERR7911542 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911579 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | za | ERR7911619 | Pre-XDR-TB | lineage2.2.1 | za | ERR4812421 | Sensitive | lineage4.1.2.1 | pe | ERR7911653 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911664 | Pre-XDR-TB | lineage2.2.1 | za | ERR1023465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830363 | HR-TB | lineage2.1 | vn | ERR7911704 | MDR-TB | lineage4.1.1.3 | za | ERR7911707 | Pre-XDR-TB | lineage2.2.1 | za | SRR22137422 | Pre-XDR-TB | lineage2.2.1 | None | SRR21690631 | Sensitive | lineage2.2.1 | None | SRR26112565 | Sensitive | lineage4.1.1.1 | None | SRR10869258 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014678 | MDR-TB | lineage2.2.1.1 | None | ERR551144 | Other | lineage4.8 | de | SRR2100827 | HR-TB | lineage3 | None | ERR3340710 | MDR-TB | lineage2.2.1;lineage4.1.1.3 | za | ERR1873509 | Pre-XDR-TB | lineage2.2.1 | za | ERR2514760 | Pre-XDR-TB | lineage3 | gb | ERR067682 | Sensitive | lineage4.8 | ru | ERR133934 | Sensitive | lineage4.8 | ru | SRR5709795 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709853 | HR-TB | lineage2.2.1 | th | SRR5709847 | Pre-XDR-TB | lineage2.2.1 | th | SRR6824581 | MDR-TB | lineage2.2.1;lineage2.2.2 | cn | SRR20969426 | Pre-XDR-TB | lineage2.2.2 | None | SRR16370654 | Sensitive | lineage4.1.1.1 | None | SRR1723539 | MDR-TB | lineage2.2.1 | None | SRR29093596 | MDR-TB | lineage2.2.1 | None | SRR29096952 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093584 | MDR-TB | lineage2.2.1 | None | ERR13261560 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284131 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289403 | XDR-TB | lineage2.2.1 | None | ERR1768627 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737939 | MDR-TB | lineage2.2.1 | None | SRR29230681 | Sensitive | lineage3.1.2 | None | ERR13266572 | XDR-TB | lineage2.2.1 | None | ERR182023 | Sensitive | lineage4.3.4.2.1 | mw | DRR188616 | Other | lineage2.2.1 | None | SRR5065371 | Pre-XDR-TB | lineage2.2.2 | vn | SRR28409449 | Sensitive | lineage4.1.1.1 | None | ERR4011057 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799540 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827813 | XDR-TB | lineage2.2.1 | None | SRR18714947 | Sensitive | lineage4.1.2.1 | None | ERR9119713 | MDR-TB | lineage2.2.1 | None | SRR10869276 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011082 | MDR-TB | lineage2.2.1 | None | ERR9992778 | MDR-TB | lineage2.2.1 | None | ERR9992782 | MDR-TB | lineage2.2.1 | None | ERR13286137 | XDR-TB | lineage2.2.1 | None | SRR5217422 | Other | lineage2.2.1 | None | ERR1654684 | MDR-TB | lineage4.6.1.2 | None | ERR9030318 | MDR-TB | lineage2.2.1 | None | ERR3639794 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992832 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992829 | MDR-TB | lineage2.2.1 | None | SRR15723268 | Sensitive | lineage2.2.1 | None | SRR25827601 | XDR-TB | lineage2.2.1.1 | None | SRR6982187 | Sensitive | lineage3 | None | ERR8975808 | XDR-TB | lineage2.2.1 | None | SRR25515885 | Sensitive | lineage4.5 | None | ERR3639800 | Pre-XDR-TB | lineage3 | None | SRR21732333 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662634 | MDR-TB | lineage2.2.1 | None | SRR22251631 | Sensitive | lineage2.2.1 | None | SRR14782298 | HR-TB | lineage2.2.1 | None | ERR9992676 | Pre-XDR-TB | lineage2.2.1 | None | ERR12311970 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284164 | Pre-XDR-TB | lineage3 | None | SRR11972235 | MDR-TB | lineage2.2.2 | None | SRR29093757 | MDR-TB | lineage2.2.1 | None | SRR29096298 | MDR-TB | lineage2.2.1 | None | SRR29096816 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093576 | Pre-XDR-TB | lineage2.2.1 | None | ERR9286052 | HR-TB | lineage2.2.1 | None | SRR29094011 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096836 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137415 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096569 | MDR-TB | lineage2.2.1 | None | ERR6866497 | Sensitive | lineage4.1.2.1 | None | SRR29056109 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5987274 | MDR-TB | lineage2.2.1 | None | ERR3275961 | Other | lineage4.9 | nl | SRR29096481 | MDR-TB | lineage2.2.1 | None | ERR10748152 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748382 | MDR-TB | lineage2.2.1 | None | SRR6389898 | Sensitive | lineage4.8 | gt | ERR11489004 | MDR-TB | lineage2.2.1 | None | SRR29094090 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831536 | XDR-TB | lineage2.2.1 | None | SRR12420752 | MDR-TB | lineage2.2.1 | None | SRR11444291 | Sensitive | lineage4.6.2.2 | None | SRR16156802 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096974 | MDR-TB | lineage2.2.1 | None | ERR13195552 | Pre-XDR-TB | lineage2.2.2 | None | ERR4896313 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969651 | Pre-XDR-TB | lineage2.2.1 | None | SAMN03246463 | Pre-XDR-TB | lineage2.2.1 | cn | SRR21576662 | RR-TB | lineage2.2.1 | None | SRR29093808 | MDR-TB | lineage2.2.1 | None | SRR27069445 | Other | lineage2.2.1 | None | SRR18496008 | Sensitive | lineage2.2.1 | None | ERR13292144 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969630 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868348 | Sensitive | lineage2.2.1 | None | SRR29096799 | MDR-TB | lineage2.2.1 | None | SRR29093635 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093606 | Pre-XDR-TB | lineage2.2.1 | None | SRR26112130 | Other | lineage2.2.1 | None | SRR29093884 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266143 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292058 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093294 | MDR-TB | lineage2.2.1 | None | SRR15723073 | Sensitive | lineage2.2.1 | None | SRR20969668 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465157 | Pre-XDR-TB | lineage2.2.1;lineage4.3.2.1 | None | SRR29093827 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093583 | MDR-TB | lineage2.2.1 | None | SRR21001884 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119984 | MDR-TB | lineage2.2.1 | None | SRR21732819 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093421 | MDR-TB | lineage2.2.1 | None | SRR29096616 | MDR-TB | lineage2.2.1 | None | SRR24799256 | Other | lineage2.2.1 | None | ERR10748133 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715074 | MDR-TB | lineage2.2.1 | None | ERR5987226 | MDR-TB | lineage2.2.1 | None | SRR29093506 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266809 | MDR-TB | lineage2.2.2 | None | SRR29096372 | MDR-TB | lineage2.2.1 | None | ERR13288994 | MDR-TB | lineage2.2.1 | None | SRR29096629 | MDR-TB | lineage2.2.1 | None | ERR13261365 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830031 | MDR-TB | lineage2.2.1 | None | ERR4797934 | Pre-XDR-TB | lineage2.2.1 | in | SRR16156774 | MDR-TB | lineage2.2.1 | None | ERR10112834 | Pre-XDR-TB | lineage2.2.1 | None | ERR3148167 | Pre-XDR-TB | lineage4.3.2 | mx | SRR30182886 | Pre-XDR-TB | lineage2.2.1 | None | SRR22249372 | Sensitive | lineage2.2.1 | None | SRR11567823 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093618 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207291 | MDR-TB | lineage2.2.1 | None | SRR29093832 | MDR-TB | lineage2.2.1 | None | SRR29055832 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR21690581 | Other | lineage4.9 | None | ERR13191059 | MDR-TB | lineage2.2.2 | None | SRR671858 | Sensitive | lineage2.2.1 | cn | SRR28351466 | XDR-TB | lineage2.2.1 | None | ERR751683 | Other | lineage2.2.1 | th | ERR718345 | Other | lineage2.2.1 | th | SRR28045263 | Pre-XDR-TB | lineage2.2.1 | None | ERR752070 | RR-TB | lineage2.2.1 | th | SRR6153234 | HR-TB | lineage2.2.1 | ca | ERR7911526 | Pre-XDR-TB | lineage2.2.1 | za | ERR7911553 | Pre-XDR-TB | lineage2.2.1 | za | ERR4811487 | MDR-TB | lineage2.2.1 | cn | ERR4800389 | Sensitive | lineage3 | None | ERR7911615 | Pre-XDR-TB | lineage2.2.1 | za | ERR2707077 | MDR-TB | lineage4.6.1.2 | cd | ERR4830911 | Pre-XDR-TB | lineage2.2.1 | np | ERR4812313 | MDR-TB | lineage4.3.3 | None | ERR4828763 | Sensitive | lineage3.1.1 | None | SRR15315887 | Sensitive | lineage2.2.1 | None | ERR9806937 | Pre-XDR-TB | lineage2.2.1 | None | ERR2660450 | MDR-TB | lineage2.2.1 | None | ERR5758371 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119830 | MDR-TB | lineage2.2.1 | None | ERR1199110 | MDR-TB | lineage4.6.1.2 | cd | ERR108462 | MDR-TB | lineage2.2.1 | ru | ERR2515159 | Pre-XDR-TB | lineage2.2.1.1 | za | SRR6339637 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | au | SRR8237351 | MDR-TB | lineage2.2.1 | np | SRR24710117 | HR-TB | lineage2.2.1 | None | ERR1035218 | HR-TB | lineage4.3.4.2 | pt | SRR29096597 | MDR-TB | lineage2.2.1 | None | SRR29096513 | MDR-TB | lineage2.2.1 | None | SRR29093857 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025497 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827321 | Pre-XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | SRR25515255 | Other | lineage2.2.1 | None | DRR185089 | HR-TB | lineage2.2.1 | vn | SRR5065328 | Other | lineage2.2.2 | vn | ERR133828 | Sensitive | lineage4.8 | ru | ERR13285221 | MDR-TB | lineage2.2.1 | None | SRR29126863 | Sensitive | lineage2.2.1 | None | ERR234135 | Sensitive | lineage2.2.1 | cn | SRR29017310 | Sensitive | lineage3.1.1 | None | ERR13249158 | Sensitive | lineage2.2.1 | None | ERR13249162 | HR-TB | lineage2.2.1 | None | ERR9285851 | HR-TB | lineage3 | None | SRR1181121 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096326 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29093270 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096321 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096947 | MDR-TB | lineage2.2.1 | None | SRR29539805 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119983 | MDR-TB | lineage2.2.1 | None | SRR5065471 | Sensitive | lineage2.2.1 | vn | DRR473854 | Sensitive | lineage2.2.1 | None | ERR9806873 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424942 | Pre-XDR-TB | lineage2.2.1 | None | SRR22250246 | Sensitive | lineage3 | None | ERR270717 | HR-TB | lineage3 | None | ERR8025496 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096772 | MDR-TB | lineage2.2.1 | None | ERR403274 | Sensitive | lineage4.8 | None | SRR22251524 | Sensitive | lineage3 | None | ERR13266946 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869280 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025622 | HR-TB | lineage2.2.1 | None | SRR25628600 | Sensitive | lineage2.2.1 | None | SRR13232477 | Pre-XDR-TB | lineage2.2.1 | None | DRR188784 | HR-TB | lineage2.2.1 | None | ERR4799491 | Pre-XDR-TB | lineage2.2.1 | in | ERR8975031 | MDR-TB | lineage2.2.1 | None | ERR4011086 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993142 | Pre-XDR-TB | lineage2.2.1 | None | ERR13288928 | MDR-TB | lineage2.2.1 | None | ERR13288954 | XDR-TB | lineage2.2.1 | None | ERR2515371 | Pre-XDR-TB | lineage2.2.1 | za | SRR22137480 | Pre-XDR-TB | lineage2.2.1 | None | ERR6362178 | MDR-TB | lineage2.2.1 | None | ERR4831019 | Pre-XDR-TB | lineage2.2.1 | np | ERR9119821 | MDR-TB | lineage2.2.1 | None | SRR12882743 | Sensitive | lineage3.1.1 | None | SRR7131183 | MDR-TB | lineage2.2.1 | None | SRR7069455 | Pre-XDR-TB | lineage3 | None | SRR6485033 | Sensitive | lineage2.2.1 | None | SRR12420482 | Sensitive | lineage2.2.1 | None | SRR10305947 | HR-TB | lineage2.2.1 | None | SRR20969709 | HR-TB | lineage2.2.1 | None | ERR1873432 | Pre-XDR-TB | lineage2.2.1 | None | SRR16103913 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708408 | Other | lineage4.1.1.1 | None | ERR10748240 | Pre-XDR-TB | lineage2.2.1 | None | SRR16100710 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748349 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR1199031 | Sensitive | lineage4.6.1.1 | ug | SRR29096519 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748502 | Pre-XDR-TB | lineage2.2.1 | None | SRR29056036 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR1873560 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040197 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868783 | HR-TB | lineage2.2.1 | None | ERR13276386 | MDR-TB | lineage4 | None | SRR29097095 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096417 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096574 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093825 | MDR-TB | lineage2.2.1 | None | SRR29093546 | MDR-TB | lineage2.2.1 | None | SRR29093540 | MDR-TB | lineage2.2.1 | None | ERR10112888 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969591 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260563 | MDR-TB | lineage4.3.3 | None | SRR29096377 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096509 | MDR-TB | lineage2.2.1;lineage4.1.1.3 | None | SRR29096571 | MDR-TB | lineage2.2.1 | None | ERR6052097 | MDR-TB | lineage2.2.1 | None | SRR29093891 | MDR-TB | lineage2.2.1 | None | SRR13888772 | Other | La2 | None | SRR29096112 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869059 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13284941 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR12420565 | Sensitive | lineage2.2.1 | None | SRR12420830 | Sensitive | lineage2.2.1 | None | ERR8025625 | Pre-XDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR16156819 | MDR-TB | lineage2.2.1 | None | SRR29093501 | MDR-TB | lineage2.2.1 | None | ERR13284276 | MDR-TB | lineage2.2.1 | None | SRR21001885 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040408 | MDR-TB | lineage2.2.1 | None | SRR29096216 | MDR-TB | lineage2.2.1 | None | SRR29096302 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869232 | Pre-XDR-TB | lineage2.2.1 | None | ERR1654680 | MDR-TB | lineage4.6.1.2 | None | SRR29093656 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156799 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112836 | Pre-XDR-TB | lineage2.2.1 | None | SRR6357006 | MDR-TB | lineage2.2.1 | None | ERR4828770 | Sensitive | lineage3.1.1 | None | SRR29093354 | MDR-TB | lineage2.2.1 | None | ERR13266571 | XDR-TB | lineage2.2.1 | None | ERR8025455 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034637 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137411 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040443 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827588 | MDR-TB | lineage2.2.1 | None | SRR29093740 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR8758881 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096301 | MDR-TB | lineage2.2.1 | None | SRR18897161 | Pre-XDR-TB | lineage2.2.1 | None | ERR12796611 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096855 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093846 | Pre-XDR-TB | lineage2.2.1 | None | SRR5535715 | HR-TB | lineage2.2.1 | None | SRR29231814 | MDR-TB | lineage4.6.1.2 | None | ERR11044591 | Sensitive | lineage3.1.3 | None | ERR5758354 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093488 | MDR-TB | lineage2.2.1 | None | SRR29096349 | MDR-TB | lineage2.2.1 | None | SRR12420812 | Sensitive | lineage2.2.1 | None | SRR29096499 | MDR-TB | lineage2.2.1;lineage4.2.2.2 | None | SRR29093699 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710097 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093763 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025608 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093276 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653067 | MDR-TB | lineage4.7 | None | SRR29096479 | MDR-TB | lineage2.2.1 | None | SRR25827769 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR29096489 | MDR-TB | lineage2.2.1 | None | ERR11080959 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR7653001 | MDR-TB | lineage2.2.1 | None | SRR16156798 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096398 | MDR-TB | lineage2.2.1 | None | SRR29056303 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096487 | MDR-TB | lineage2.2.1 | None | SRR6785503 | HR-TB | lineage2.2.1 | None | ERR4011063 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088314 | RR-TB | lineage2.2.1 | None | SRR29093807 | MDR-TB | lineage2.2.1 | None | SRR10305689 | Sensitive | lineage2.2.1 | None | SRR26937035 | Pre-XDR-TB | lineage2.2.1 | None | ERR13246383 | Other | lineage2.2.1 | None | SRR19267905 | Sensitive | lineage4.1.1.1 | None | SRR29094057 | MDR-TB | lineage2.2.1 | None | ERR9807039 | Pre-XDR-TB | lineage2.2.1 | None | DRR188780 | Sensitive | lineage2.2.1 | None | ERR13195509 | MDR-TB | lineage2.2.2 | None | SRR29093335 | MDR-TB | lineage2.2.1 | None | ERR6052045 | MDR-TB | lineage2.2.1 | None | SRR27980494 | Sensitive | lineage2.2.1 | None | ERR13297994 | MDR-TB | lineage2.2.2 | None | SRR15368910 | Sensitive | lineage2.2.1 | None | SRR29093765 | XDR-TB | lineage2.2.1 | None | SRR29094081 | MDR-TB | lineage2.2.1 | None | SRR29093527 | MDR-TB | lineage2.2.1 | None | ERR9806878 | MDR-TB | lineage2.2.1 | None | SRR1180972 | MDR-TB | lineage2.2.1 | None | SRR29093489 | MDR-TB | lineage2.2.1 | None | SRR29093804 | MDR-TB | lineage2.2.1 | None | SRR29230784 | MDR-TB | lineage4.6.1.2 | None | SRR20969457 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043607 | MDR-TB | lineage4 | None | ERR10748114 | Pre-XDR-TB | lineage2.2.1;lineage4.8.1 | None | ERR10465879 | Sensitive | lineage3 | None | SRR12634630 | Sensitive | lineage2.2.1 | None | SRR1181120 | MDR-TB | lineage2.2.1 | None | SRR29093537 | MDR-TB | lineage2.2.1 | None | ERR13260577 | MDR-TB | lineage4.3.3 | None | ERR4011061 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266843 | Sensitive | lineage3.1.2 | None | SRR22251332 | Sensitive | lineage3.1.2 | None | SRR16156733 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865677 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011075 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142388 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267080 | Pre-XDR-TB | lineage2.2.1 | None | SRR29094068 | MDR-TB | lineage2.2.1 | None | SRR5217421 | Sensitive | lineage2.2.1 | None | ERR5987240 | MDR-TB | lineage2.2.1 | None | SRR25827669 | XDR-TB | lineage2.2.1;lineage3 | None | SRR12420396 | Sensitive | lineage2.2.1 | None | SRR29096511 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800547 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992618 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093655 | MDR-TB | lineage2.2.1 | None | ERR13265518 | Sensitive | lineage2.2.1 | None | SRR8217919 | HR-TB | lineage2.2.1 | None | SRR29093431 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096827 | MDR-TB | lineage2.2.1 | None | SRR29094012 | MDR-TB | lineage2.2.1.1 | None | SRR10040159 | MDR-TB | lineage2.2.1 | None | ERR10748288 | MDR-TB | lineage2.2.1 | None | SRR16156777 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284646 | MDR-TB | lineage3 | None | ERR13291620 | Sensitive | lineage4.1.1.1 | None | ERR11080936 | MDR-TB | lineage3 | None | SRR10851694 | Sensitive | lineage4.7 | None | ERR403317 | Sensitive | lineage4.8 | None | ERR13292506 | MDR-TB | lineage2.2.1 | None |
|---|
