Rv3862c - p.Val79Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
28 Sensitive
4 RR-TB
8 HR-TB
16 MDR-TB
36 Pre-XDR-TB
3 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 52 |
| lineage4.8 | 10 |
| lineage4.1.1.3 | 9 |
| lineage2.2.2 | 5 |
| lineage4.3.4.2 | 2 |
| lineage2.2.1.1 | 5 |
| lineage4.6.2.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage3 | 1 |
| lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 98 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3273163 | MDR-TB | lineage2.2.1 | None | SRR21657195 | Sensitive | lineage2.2.1 | None | SRR1167294 | Pre-XDR-TB | lineage4.8 | None | ERR9119916 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156282 | XDR-TB | lineage4.1.1.3 | None | SRR1048854 | Pre-XDR-TB | lineage2.2.2 | None | SRR10851663 | Sensitive | lineage4.3.4.2 | None | ERR5987390 | HR-TB | lineage2.2.1 | None | SRR069943 | MDR-TB | lineage2.2.1.1 | None | SRR29096664 | HR-TB | lineage2.2.1 | None | SRR29050760 | HR-TB | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR9119915 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13267100 | Pre-XDR-TB | lineage2.2.1 | None | SRR11444313 | Sensitive | lineage4.6.2.2 | None | SAMN02360557 | Pre-XDR-TB | lineage2.2.2 | kr | ERR1034639 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR15316400 | RR-TB | lineage2.2.1 | None | ERR4811318 | MDR-TB | lineage2.2.1 | cn | ERR11730268 | Sensitive | lineage4.3.2.1 | None | SRR28046312 | Other | lineage2.2.1 | None | ERR6362259 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4830955 | Pre-XDR-TB | lineage2.2.1 | np | SRR28239481 | Sensitive | lineage4.3.3 | None | ERR4817410 | Sensitive | lineage2.2.1 | gb | ERR2512952 | Other | lineage4.4.1.1 | gb | SRR29052790 | Sensitive | lineage2.2.1 | None | ERR5865264 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02403509 | Pre-XDR-TB | lineage4.8 | za | SRR18337383 | Sensitive | lineage4.8 | None | ERR2517515 | Sensitive | lineage4.8 | nl | ERR6362771 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4828609 | HR-TB | lineage2.2.1 | vn | SRR1173248 | Pre-XDR-TB | lineage4.8 | None | SRR11662711 | MDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | ERR2446399 | Sensitive | lineage4.8 | nl | SRR25534501 | Sensitive | lineage2.2.1 | None | SRR16370366 | Sensitive | lineage2.2.1 | None | ERR5865265 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055648 | MDR-TB | lineage4.8.1 | None | SRR29231653 | MDR-TB | lineage4.6.1.2 | None | SRR1048855 | Pre-XDR-TB | lineage2.2.2 | None | SRR24083594 | Sensitive | lineage2.2.1 | None | ERR10112853 | XDR-TB | lineage4.1.1.3 | None | SRR29772762 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723675 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797908 | Pre-XDR-TB | lineage2.2.1 | in | SRR1173443 | Pre-XDR-TB | lineage4.8 | None | SRR14782285 | Pre-XDR-TB | lineage2.2.1 | None | ERR13275968 | Sensitive | lineage2.2.1 | None | ERR751755 | Sensitive | lineage2.2.1 | th | SRR1013555 | Pre-XDR-TB | lineage2.2.2 | None | SRR25206929 | MDR-TB | lineage2.2.1 | None | ERR8975781 | XDR-TB | lineage4.1.1.3 | None | SRR15316526 | MDR-TB | lineage2.2.1;lineage4 | None | SRR5709949 | Pre-XDR-TB | lineage2.2.1 | th | ERR161132 | Sensitive | lineage4.3.4.2.1 | mw | SRR27069417 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231054 | Sensitive | lineage4.3.4.2 | None | SRR22249682 | Sensitive | lineage2.2.1 | None | SRR26399432 | HR-TB | lineage2.2.1 | None | ERR229978 | Pre-XDR-TB | lineage2.2.1 | ru | ERR9120071 | MDR-TB | lineage2.2.1 | None | SRR29017155 | RR-TB | lineage2.2.1.2 | None | ERR3275367 | Sensitive | lineage4.8 | nl | ERR13262092 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11044079 | Sensitive | lineage3 | None | SRR21031684 | Sensitive | lineage2.2.1 | None | SRR10040538 | MDR-TB | lineage2.2.1 | None | SRR29772603 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5865266 | Pre-XDR-TB | lineage2.2.1 | None | SRR30180264 | MDR-TB | lineage2.2.1.1 | None | SRR15368992 | Sensitive | lineage2.2.1 | None | SRR29385327 | Other | lineage2.2.1.1 | None | SRR1013556 | Pre-XDR-TB | lineage2.2.2 | None | SRR18337394 | Sensitive | lineage4.8 | None | ERR4796952 | Pre-XDR-TB | lineage2.2.1 | in | ERR13261119 | Pre-XDR-TB | lineage2.2.1 | None | DRR474209 | Sensitive | lineage4.9 | None | SRR26399330 | HR-TB | lineage2.2.1 | None | ERR2706990 | MDR-TB | lineage4.6.1.2 | cd | SRR24710092 | Pre-XDR-TB | lineage2.2.1 | None | SRR6153063 | Sensitive | lineage2.2.1 | ca | ERR2515497 | Sensitive | lineage4.1.1.1 | za | SRR6280283 | Sensitive | lineage2.2.1 | cn | SRR6824370 | Pre-XDR-TB | lineage2.2.1 | cn | SRR28860197 | HR-TB | lineage2.2.1 | None | SAMN03246413 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120070 | HR-TB | lineage2.2.1 | None | SRR27069372 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112858 | MDR-TB | lineage2.2.1 | None | ERR11774868 | Sensitive | lineage4.3.2.1 | None | ERR4553424 | RR-TB | lineage2.2.1 | None | ERR11043693 | MDR-TB | lineage4.1.2.1 | None | ERR10112889 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1165276 | Pre-XDR-TB | lineage4.8 | None | ERR10112867 | MDR-TB | lineage2.2.1 | None |
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