Rv3919c - c.489delA
Drug resistance types
0 Sensitive
0 RR-TB
13 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
146 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1.1 | 144 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage4.8 | 2 |
| lineage2.2.1 | 2 |
| lineage4.3.3 | 4 |
| lineage1.2.1.2.1 | 2 |
| lineage3 | 3 |
| lineage1.1.2 | 3 |
| lineage1.1.3.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4 | 1 |
| lineage4.3.3;lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 168 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14781881 | Other | lineage4.2.1.1 | None | SRR14781868 | Other | lineage4.2.1.1 | None | SRR14781895 | HR-TB | lineage4.2.1.1 | None | SRR14781890 | Other | lineage4.2.1.1 | None | SRR14781936 | Other | lineage4.2.1.1 | None | SRR14781912 | Other | lineage4.2.1.1 | None | SRR14781953 | Other | lineage4.2.1.1 | None | SRR14781950 | Other | lineage4.2.1.1 | None | SRR14781985 | Other | lineage4.2.1.1 | None | SRR14781962 | Other | lineage4.2.1.1 | None | SRR14782026 | Other | lineage4.2.1.1 | None | SRR14782014 | Other | lineage4.2.1.1 | None | SRR14782057 | Other | lineage4.2.1.1 | None | SRR14782105 | Other | lineage4.2.1.1 | None | SRR14782074 | Other | lineage4.2.1.1 | None | SRR14782134 | Other | lineage4.2.1.1 | None | SRR14782123 | Other | lineage4.2.1.1 | None | SRR14782172 | Other | lineage4.2.1.1 | None | SRR14782163 | HR-TB | lineage4.2.1.1 | None | SRR14782213 | Other | lineage4.2.1.1 | None | SRR14782182 | Other | lineage4.2.1.1 | None | SRR14782186 | HR-TB | lineage4.2.1.1 | None | SRR14782193 | Other | lineage4.2.1.1 | None | SRR14782212 | Other | lineage4.8;lineage4.2.1.1 | None | SRR14782256 | MDR-TB | lineage4.2.1.1 | None | SRR14782215 | Other | lineage4.2.1.1 | None | SRR14782231 | Other | lineage4.2.1.1 | None | SRR14782292 | Other | lineage4.2.1.1 | None | SRR14782262 | Other | lineage4.2.1.1 | None | SRR14782319 | Other | lineage4.2.1.1 | None | SRR14782316 | Other | lineage4.2.1.1 | None | SRR14782348 | Other | lineage4.2.1.1 | None | SRR14782373 | Other | lineage4.2.1.1 | None | SRR14782369 | Other | lineage4.2.1.1 | None | SRR14782410 | Other | lineage4.2.1.1 | None | SRR14782380 | Other | lineage4.2.1.1 | None | SRR14782435 | Other | lineage4.2.1.1 | None | SRR14782415 | Other | lineage4.2.1.1 | None | SRR14782627 | Other | lineage4.2.1.1 | None | SRR14782450 | Other | lineage4.2.1.1 | None | SRR14782473 | Other | lineage4.2.1.1 | None | SRR14782488 | Other | lineage4.2.1.1 | None | SRR14782484 | Other | lineage4.2.1.1 | None | SRR14782534 | Other | lineage4.2.1.1 | None | SRR14782529 | Other | lineage4.2.1.1 | None | SRR14782542 | Other | lineage4.2.1.1 | None | SRR14782592 | HR-TB | lineage4.2.1.1 | None | SRR14782477 | Other | lineage4.2.1.1 | None | SRR14782503 | Other | lineage4.2.1.1 | None | SRR14782586 | Other | lineage4.2.1.1 | None | SRR14782692 | Other | lineage4.2.1.1 | None | SRR14782647 | Other | lineage4.2.1.1 | None | SRR14782653 | Other | lineage4.2.1.1 | None | SRR14782740 | Other | lineage4.2.1.1 | None | SRR14782795 | Other | lineage4.2.1.1 | None | SRR14782741 | Other | lineage4.2.1.1 | None | SRR14782781 | Other | lineage4.2.1.1 | None | SRR14782804 | Other | lineage4.2.1.1 | None | SRR14801308 | Other | lineage4.2.1.1 | None | SRR14801320 | Other | lineage4.2.1.1 | None | SRR14801313 | Other | lineage4.2.1.1 | None | SRR14801343 | Other | lineage4.2.1.1 | None | SRR14801520 | Other | lineage4.2.1.1 | None | SRR14801449 | Other | lineage4.2.1.1 | None | SRR14801509 | Other | lineage4.2.1.1 | None | SRR14801842 | Other | lineage4.2.1.1 | None | SRR14801657 | Other | lineage4.2.1.1 | None | SRR14801660 | Other | lineage4.2.1.1 | None | SRR14801807 | Other | lineage4.2.1.1 | None | SRR14801529 | HR-TB | lineage4.2.1.1 | None | SRR14801555 | Other | lineage4.2.1.1 | None | SRR14801818 | Other | lineage4.2.1.1 | None | SRR14801865 | Other | lineage4.2.1.1 | None | SRR14801917 | Other | lineage4.2.1.1 | None | SRR14801866 | Other | lineage4.2.1.1 | None | SRR14801897 | HR-TB | lineage4.2.1.1 | None | SRR14801965 | Other | lineage4.2.1.1 | None | SRR14801954 | Other | lineage4.2.1.1 | None | SRR14801921 | Other | lineage4.2.1.1 | None | SRR14801963 | Other | lineage4.2.1.1 | None | SRR14801968 | Other | lineage4.2.1.1 | None | SRR14802232 | Other | lineage4.2.1.1 | None | SRR14802026 | Other | lineage4.2.1.1 | None | SRR14802113 | Other | lineage4.2.1.1 | None | SRR14802083 | Other | lineage4.2.1.1 | None | SRR14802252 | HR-TB | lineage4.2.1.1 | None | SRR14807479 | Other | lineage4.2.1.1 | None | SRR14802284 | Other | lineage4.2.1.1 | None | SRR14802250 | Other | lineage4.2.1.1 | None | SRR14807609 | Other | lineage4.2.1.1 | None | SRR14807502 | Other | lineage4.2.1.1 | None | SRR14807531 | Other | lineage4.2.1.1 | None | SRR14807496 | Other | lineage4.2.1.1 | None | SRR14807599 | Other | lineage4.2.1.1 | None | ERR11067756 | Other | lineage4.2.1.1 | None | SRR21685256 | Other | lineage4.8 | None | SRR16088316 | Other | lineage2.2.1 | None | SRR22528586 | MDR-TB | lineage4.3.3 | None | SRR26112295 | Other | lineage1.2.1.2.1 | None | SRR6797350 | Other | lineage3 | None | SRR21798478 | Other | lineage4.2.1.1 | None | ERR11081223 | MDR-TB | lineage4.3.3 | None | ERR11082004 | Pre-XDR-TB | lineage4.3.3 | None | SRR26056451 | Other | lineage1.1.2 | None | SRR3743482 | Other | lineage4.2.1.1 | None | ERR4814733 | HR-TB | lineage1.1.3.1 | None | SRR6367396 | Other | lineage1.2.2.2 | au | SAMN02584667 | Other | lineage4.2.1.1 | md | SRR5153880 | Other | lineage4.2.1.1 | None | SRR5153920 | Pre-XDR-TB | lineage4.2.1.1 | None | SAMN02584659 | Other | lineage4.2.1.1 | md | SRR5153881 | Other | lineage4.2.1.1 | None | ERR11067351 | Other | lineage4.2.1.1 | None | ERR4800446 | HR-TB | lineage3 | in | ERR2432993 | HR-TB | lineage4.3.2 | br | ERR4828364 | HR-TB | lineage2.1 | None | ERR4800356 | Other | lineage1.1.2 | in | SRR6807669 | Other | lineage4.2.1.1 | None | SRR6807670 | Other | lineage4.2.1.1 | None | ERR4829098 | Other | lineage4.2.2.2 | dj | SRR7645809 | Other | lineage4.2.1.1 | None | SRR7645799 | Other | lineage4.2.1.1 | None | SRR7645820 | Other | lineage4.2.1.1 | None | SRR7645827 | Other | lineage4.2.1.1 | None | SRR7645930 | Other | lineage4.2.1.1 | None | SRR7645875 | Other | lineage4.2.1.1 | None | SRR7645850 | Other | lineage4.2.1.1 | None | SRR7645997 | Other | lineage4.2.1.1 | None | SRR7645970 | Other | lineage4.2.1.1 | None | SRR7645966 | Other | lineage4.2.1.1 | None | SRR7645968 | Other | lineage4.2.1.1 | None | SRR7646065 | Other | lineage4.2.1.1 | None | SRR7646042 | HR-TB | lineage4.2.1.1 | None | SRR7646056 | Other | lineage4.2.1.1 | None | ERR3994100 | Other | lineage4 | None | SRR7755725 | Other | lineage4.3.3;lineage4.2.1.1 | None | ERR11798661 | MDR-TB | lineage4.2.1.1 | None | ERR11043982 | Other | lineage1.2.1.2.1 | None | ERR12115311 | Other | lineage2.2.1 | None | ERR3639821 | Pre-XDR-TB | lineage4.3.3 | None | SRR10379954 | Other | lineage4.2.1.1 | None | SRR26112005 | Other | lineage4.8 | None | ERR4799368 | HR-TB | lineage1.1.2 | None | ERR4831488 | Pre-XDR-TB | lineage3 | None | SRR21798453 | Other | lineage4.2.1.1 | None | SRR10379900 | Other | lineage4.2.1.1 | None | SRR10379901 | Other | lineage4.2.1.1 | None | SRR10379951 | Other | lineage4.2.1.1 | None | SRR10379981 | Other | lineage4.2.1.1 | None | SRR10380058 | Other | lineage4.2.1.1 | None | SRR10380001 | Other | lineage4.2.1.1 | None | SRR10380028 | Other | lineage4.2.1.1 | None | SRR10380044 | Other | lineage4.2.1.1 | None | SRR10380059 | Other | lineage4.2.1.1 | None | SRR10380090 | Other | lineage4.2.1.1 | None | SRR10380075 | Other | lineage4.2.1.1 | None | SRR10380154 | Other | lineage4.2.1.1 | None | SRR10380144 | MDR-TB | lineage4.2.1.1 | None | SRR10380091 | Other | lineage4.2.1.1 | None | SRR10380153 | Other | lineage4.2.1.1 | None | ERR11050328 | Other | lineage4.2.1.1 | None | SRR10380156 | Other | lineage4.2.1.1 | None | SRR10380169 | Other | lineage4.2.1.1 | None | SRR10380228 | Other | lineage4.2.1.1 | None | SRR1166123 | Other | lineage4.2.1.1 | None | SRR1169097 | Other | lineage4.2.1.1 | None | SRR1166337 | Other | lineage4.2.1.1 | None | SRR1168988 | Other | lineage4.2.1.1 | None |
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