lineage | Count |
---|---|
lineage4.3.4.2 | 117 |
lineage3 | 5 |
lineage1.2.2.2 | 1 |
lineage1.1.1.1 | 4 |
lineage1.1.1 | 3 |
lineage4.3.4.1 | 2 |
lineage4.4.2 | 5 |
lineage4.3.3 | 4 |
lineage1.1.2 | 1 |
lineage3.1.2 | 2 |
lineage4.3.3;lineage4.3.4.2 | 1 |
lineage3.1.2.1 | 2 |
lineage4.6.2.2 | 1 |
spoligotype | Count |
---|---|
None | 148 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR1227527 | MDR-TB | lineage4.3.4.2 | None |
ERR1036295 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1664619 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1664654 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1664644 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR3335776 | Pre-XDR-TB | lineage3 | pk |
ERR2864239 | MDR-TB | lineage4.3.4.2 | pt |
ERR2864288 | MDR-TB | lineage4.3.4.2 | pt |
ERR2864218 | MDR-TB | lineage4.3.4.2 | pt |
ERR2864225 | XDR-TB | lineage4.3.4.2 | pt |
ERR2864250 | MDR-TB | lineage4.3.4.2 | pt |
ERR2864289 | MDR-TB | lineage4.3.4.2 | pt |
ERR2864269 | MDR-TB | lineage4.3.4.2 | pt |
ERR2864284 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR7764396 | Pre-XDR-TB | lineage4.3.4.2 | None |
SRR17657950 | MDR-TB | lineage4.3.4.2 | None |
ERR275184 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR275207 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR275229 | MDR-TB | lineage4.3.4.2 | pt |
ERR4676896 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1035220 | MDR-TB | lineage4.3.4.2 | pt |
ERR1035221 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1035244 | MDR-TB | lineage4.3.4.2 | pt |
ERR1034823 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1034835 | MDR-TB | lineage4.3.4.2 | pt |
ERR1664625 | MDR-TB | lineage4.3.4.2 | None |
SRR29772435 | MDR-TB | lineage1.2.2.2 | None |
SRR29016753 | Other | lineage1.1.1.1 | None |
ERR6326065 | MDR-TB | lineage4.3.4.2 | None |
ERR1664634 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR2864297 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1664630 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1034879 | MDR-TB | lineage4.3.4.2 | pt |
ERR10680103 | MDR-TB | lineage1.1.1 | None |
ERR9119501 | MDR-TB | lineage4.3.4.1 | None |
ERR1227529 | MDR-TB | lineage4.3.4.2 | None |
SRR6511593 | MDR-TB | lineage4.3.4.2 | None |
ERR1036284 | MDR-TB | lineage4.3.4.2 | pt |
ERR1664624 | MDR-TB | lineage4.3.4.2 | None |
ERR7764406 | Pre-XDR-TB | lineage4.3.4.2 | None |
SRR7453038 | MDR-TB | lineage4.3.4.2 | None |
SRR6511631 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1664627 | MDR-TB | lineage4.3.4.2 | None |
ERR5530525 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1815554 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR13285125 | MDR-TB | lineage4.3.4.2 | None |
SRR6511630 | MDR-TB | lineage4.3.4.2 | None |
ERR13291118 | MDR-TB | lineage4.4.2 | None |
ERR1664659 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1664641 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1664651 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1664661 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1664648 | MDR-TB | lineage4.3.4.2 | None |
ERR4872095 | MDR-TB | lineage4.3.4.1 | None |
ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt |
SRR6964497 | MDR-TB | lineage3 | None |
ERR2864271 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR2864253 | Pre-XDR-TB | lineage4.3.4.2 | pt |
SRR6511625 | MDR-TB | lineage4.3.4.2 | None |
ERR779886 | HR-TB | lineage4.3.3 | pe |
ERR1664631 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR400553 | MDR-TB | lineage4.3.4.2 | gb |
ERR1193662 | RR-TB | lineage4.3.3 | so |
ERR2864264 | MDR-TB | lineage4.3.4.2 | pt |
ERR2864240 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR4812133 | HR-TB | lineage4.3.3 | pe |
ERR4813958 | RR-TB | lineage4.3.4.2 | br |
SRR6824347 | RR-TB | lineage4.4.2 | cn |
ERR1664626 | MDR-TB | lineage4.3.4.2 | None |
ERR1036291 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1036293 | MDR-TB | lineage4.3.4.2 | pt |
ERR1035179 | HR-TB | lineage4.3.4.2 | pt |
ERR1035181 | MDR-TB | lineage4.3.4.2 | pt |
ERR1035186 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1035187 | MDR-TB | lineage4.3.4.2 | pt |
ERR1035194 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1035234 | MDR-TB | lineage4.3.4.2 | pt |
ERR1035228 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1035247 | MDR-TB | lineage4.3.4.2 | pt |
SRR6511595 | MDR-TB | lineage4.3.4.2 | None |
ERR1034821 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1034886 | Pre-XDR-TB | lineage4.3.4.2 | pt |
SRR1723976 | RR-TB | lineage4.4.2 | cn |
ERR10680016 | MDR-TB | lineage1.1.1 | None |
ERR2510311 | MDR-TB | lineage3 | pk |
SRR6511634 | MDR-TB | lineage4.3.4.2 | None |
ERR12556600 | Other | lineage1.1.2 | None |
SRR28046275 | HR-TB | lineage3.1.2 | None |
ERR275217 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR4828559 | Other | lineage1.1.1.1 | None |
ERR1035237 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1034911 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | pt |
ERR275219 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1036285 | MDR-TB | lineage4.3.4.2 | pt |
SRR6511626 | MDR-TB | lineage4.3.4.2 | None |
ERR11043215 | MDR-TB | lineage4.3.4.2 | None |
ERR3132176 | MDR-TB | lineage4.3.4.2 | None |
ERR4811748 | HR-TB | lineage4.3.3 | pe |
ERR275222 | MDR-TB | lineage4.3.4.2 | pt |
ERR275197 | MDR-TB | lineage4.3.4.2 | None |
SRR7453036 | MDR-TB | lineage4.3.4.2 | None |
ERR3335777 | Pre-XDR-TB | lineage3 | pk |
ERR1664623 | MDR-TB | lineage4.3.4.2 | None |
ERR1664629 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1664658 | MDR-TB | lineage4.3.4.2 | None |
ERR1664649 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1227530 | MDR-TB | lineage4.3.4.2 | None |
SRR29289224 | Other | lineage3 | None |
ERR2864294 | MDR-TB | lineage4.3.4.2 | pt |
ERR2864283 | Pre-XDR-TB | lineage4.3.4.2 | pt |
SRR28044913 | HR-TB | lineage3.1.2 | None |
ERR502959 | RR-TB | lineage4.4.2 | None |
SRR6511637 | XDR-TB | lineage4.3.4.2 | None |
ERR2516840 | MDR-TB | lineage4.3.4.2 | gb |
ERR1034855 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1034909 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1035176 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1035203 | MDR-TB | lineage4.3.4.2 | pt |
ERR1035225 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR1035243 | MDR-TB | lineage4.3.4.2 | pt |
ERR1034844 | MDR-TB | lineage4.3.4.2 | pt |
ERR275221 | MDR-TB | lineage4.3.4.2 | pt |
ERR1036282 | MDR-TB | lineage4.3.4.2 | pt |
ERR275211 | MDR-TB | lineage4.3.4.2 | pt |
ERR275224 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR10395965 | MDR-TB | lineage4.3.4.2 | None |
ERR1664632 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR1213924 | MDR-TB | lineage4.3.4.2 | pt |
ERR2179644 | RR-TB | lineage4.4.2 | cn |
ERR1664633 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR2514632 | HR-TB | lineage3.1.2.1 | None |
ERR10680024 | MDR-TB | lineage1.1.1 | None |
ERR4828597 | Other | lineage1.1.1.1 | vn |
SRR24783282 | RR-TB | lineage4.6.2.2 | None |
ERR1034873 | Pre-XDR-TB | lineage4.3.4.2 | pt |
ERR4676883 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR275227 | MDR-TB | lineage4.3.4.2 | pt |
ERR10969172 | MDR-TB | lineage4.3.4.2 | None |
ERR4798535 | MDR-TB | lineage3.1.2.1 | in |
SRR6511633 | MDR-TB | lineage4.3.4.2 | None |
SRR7453035 | MDR-TB | lineage4.3.4.2 | None |
ERR275212 | Pre-XDR-TB | lineage4.3.4.2 | pt |
SRR29050857 | Other | lineage1.1.1.1 | None |
SRR7453012 | MDR-TB | lineage4.3.4.2 | None |
ERR1664628 | MDR-TB | lineage4.3.4.2 | None |
ERR9811807 | Pre-XDR-TB | lineage4.3.4.2 | None |
ERR275210 | HR-TB | lineage4.3.4.2 | pt |
ERR1034894 | MDR-TB | lineage4.3.4.2 | pt |