Rv3919c - p.Ala80Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
7 RR-TB
8 HR-TB
73 MDR-TB
52 Pre-XDR-TB
2 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 117 |
| lineage3.1.2.1 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.4.2 | 5 |
| lineage3 | 5 |
| lineage1.1.1 | 3 |
| lineage1.1.1.1 | 4 |
| lineage3.1.2 | 2 |
| lineage4.3.3;lineage4.3.4.2 | 1 |
| lineage4.3.3 | 4 |
| lineage1.1.2 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1664632 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664634 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2864297 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1213924 | MDR-TB | lineage4.3.4.2 | pt | ERR1664633 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2514632 | HR-TB | lineage3.1.2.1 | None | ERR9119501 | MDR-TB | lineage4.3.4.1 | None | SRR24783282 | RR-TB | lineage4.6.2.2 | None | ERR1227529 | MDR-TB | lineage4.3.4.2 | None | ERR2179644 | RR-TB | lineage4.4.2 | cn | ERR1036285 | MDR-TB | lineage4.3.4.2 | pt | SRR6511626 | MDR-TB | lineage4.3.4.2 | None | SRR6511633 | MDR-TB | lineage4.3.4.2 | None | ERR5530525 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1815554 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664628 | MDR-TB | lineage4.3.4.2 | None | ERR9811807 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR13285125 | MDR-TB | lineage4.3.4.2 | None | ERR3335777 | Pre-XDR-TB | lineage3 | pk | ERR1035237 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR3335776 | Pre-XDR-TB | lineage3 | pk | SRR6964497 | MDR-TB | lineage3 | None | ERR275221 | MDR-TB | lineage4.3.4.2 | pt | ERR275227 | MDR-TB | lineage4.3.4.2 | pt | SRR7453036 | MDR-TB | lineage4.3.4.2 | None | SRR6511630 | MDR-TB | lineage4.3.4.2 | None | ERR1664623 | MDR-TB | lineage4.3.4.2 | None | ERR1664629 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4872095 | MDR-TB | lineage4.3.4.1 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1664631 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR400553 | MDR-TB | lineage4.3.4.2 | gb | ERR1664626 | MDR-TB | lineage4.3.4.2 | None | ERR1034909 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034823 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034835 | MDR-TB | lineage4.3.4.2 | pt | ERR1034886 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1664625 | MDR-TB | lineage4.3.4.2 | None | ERR1036282 | MDR-TB | lineage4.3.4.2 | pt | ERR6326065 | MDR-TB | lineage4.3.4.2 | None | ERR10395965 | MDR-TB | lineage4.3.4.2 | None | ERR1664630 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR10680016 | MDR-TB | lineage1.1.1 | None | ERR10680103 | MDR-TB | lineage1.1.1 | None | ERR2510311 | MDR-TB | lineage3 | pk | ERR4828597 | Other | lineage1.1.1.1 | vn | SRR6511634 | MDR-TB | lineage4.3.4.2 | None | ERR1034873 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR28046275 | HR-TB | lineage3.1.2 | None | ERR1036284 | MDR-TB | lineage4.3.4.2 | pt | ERR4828559 | Other | lineage1.1.1.1 | None | ERR1034911 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | pt | ERR10969172 | MDR-TB | lineage4.3.4.2 | None | SRR7453038 | MDR-TB | lineage4.3.4.2 | None | SRR6511631 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR7453035 | MDR-TB | lineage4.3.4.2 | None | ERR13291118 | MDR-TB | lineage4.4.2 | None | ERR4798535 | MDR-TB | lineage3.1.2.1 | in | ERR4811748 | HR-TB | lineage4.3.3 | pe | ERR1227527 | MDR-TB | lineage4.3.4.2 | None | ERR1036295 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1664619 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664654 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664644 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664658 | MDR-TB | lineage4.3.4.2 | None | ERR1664649 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664659 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664641 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664651 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664661 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664648 | MDR-TB | lineage4.3.4.2 | None | ERR1227530 | MDR-TB | lineage4.3.4.2 | None | ERR2864239 | MDR-TB | lineage4.3.4.2 | pt | ERR2864288 | MDR-TB | lineage4.3.4.2 | pt | ERR2864218 | MDR-TB | lineage4.3.4.2 | pt | ERR2864225 | XDR-TB | lineage4.3.4.2 | pt | ERR2864250 | MDR-TB | lineage4.3.4.2 | pt | ERR2864289 | MDR-TB | lineage4.3.4.2 | pt | ERR2864283 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864271 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2864253 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR7764396 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR6511625 | MDR-TB | lineage4.3.4.2 | None | SRR28044913 | HR-TB | lineage3.1.2 | None | ERR4812133 | HR-TB | lineage4.3.3 | pe | ERR1193662 | RR-TB | lineage4.3.3 | so | ERR2864264 | MDR-TB | lineage4.3.4.2 | pt | ERR2864240 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2516840 | MDR-TB | lineage4.3.4.2 | gb | SRR6824347 | RR-TB | lineage4.4.2 | cn | ERR1036291 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1036293 | MDR-TB | lineage4.3.4.2 | pt | ERR1035176 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035186 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035187 | MDR-TB | lineage4.3.4.2 | pt | ERR1035194 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035220 | MDR-TB | lineage4.3.4.2 | pt | ERR1035234 | MDR-TB | lineage4.3.4.2 | pt | ERR1035228 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035247 | MDR-TB | lineage4.3.4.2 | pt | ERR1035244 | MDR-TB | lineage4.3.4.2 | pt | ERR1034821 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034844 | MDR-TB | lineage4.3.4.2 | pt | SRR29016753 | Other | lineage1.1.1.1 | None | ERR1034879 | MDR-TB | lineage4.3.4.2 | pt | ERR10680024 | MDR-TB | lineage1.1.1 | None | ERR12556600 | Other | lineage1.1.2 | None | SRR1723976 | RR-TB | lineage4.4.2 | cn | SRR6511593 | MDR-TB | lineage4.3.4.2 | None | ERR4676883 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1664624 | MDR-TB | lineage4.3.4.2 | None | ERR7764406 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR11043215 | MDR-TB | lineage4.3.4.2 | None | ERR3132176 | MDR-TB | lineage4.3.4.2 | None | ERR1664627 | MDR-TB | lineage4.3.4.2 | None | SRR29050857 | Other | lineage1.1.1.1 | None | SRR7453012 | MDR-TB | lineage4.3.4.2 | None | ERR1034894 | MDR-TB | lineage4.3.4.2 | pt | SRR29289224 | Other | lineage3 | None | ERR275184 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275207 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275217 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275219 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275224 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275197 | MDR-TB | lineage4.3.4.2 | None | ERR275222 | MDR-TB | lineage4.3.4.2 | pt | ERR275211 | MDR-TB | lineage4.3.4.2 | pt | ERR275210 | HR-TB | lineage4.3.4.2 | pt | ERR275212 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR275229 | MDR-TB | lineage4.3.4.2 | pt | ERR2864294 | MDR-TB | lineage4.3.4.2 | pt | ERR2864269 | MDR-TB | lineage4.3.4.2 | pt | ERR2864284 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR779886 | HR-TB | lineage4.3.3 | pe | ERR502959 | RR-TB | lineage4.4.2 | None | SRR17657950 | MDR-TB | lineage4.3.4.2 | None | ERR4813958 | RR-TB | lineage4.3.4.2 | br | ERR4676896 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR6511637 | XDR-TB | lineage4.3.4.2 | None | ERR1034855 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035179 | HR-TB | lineage4.3.4.2 | pt | ERR1035181 | MDR-TB | lineage4.3.4.2 | pt | ERR1035203 | MDR-TB | lineage4.3.4.2 | pt | ERR1035221 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035225 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035243 | MDR-TB | lineage4.3.4.2 | pt | SRR6511595 | MDR-TB | lineage4.3.4.2 | None | SRR29772435 | MDR-TB | lineage1.2.2.2 | None |
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