lineage | Count |
---|---|
lineage3.1.2.1 | 3 |
lineage1.2.1.2.1 | 4 |
lineage1.1.1.1 | 1 |
lineage1.1.2 | 5 |
lineage2.1 | 2 |
lineage4.5 | 5 |
lineage4.3.4.2.1 | 1 |
lineage4.1.2 | 2 |
lineage4.3.2 | 2 |
lineage3 | 4 |
lineage4.1.1.3 | 3 |
lineage4.3.4.2 | 1 |
lineage4.2.2 | 1 |
spoligotype | Count |
---|---|
None | 34 |
ID | Drug resistance | Lineage | Country iso2 | ERR4800134 | HR-TB | lineage3.1.2.1 | None | ERR400412 | Sensitive | lineage1.2.1.2.1 | None | SRR30182721 | Sensitive | lineage1.1.1.1 | None | SAMN02599042 | Sensitive | lineage1.1.2 | in | SRR11715723 | MDR-TB | lineage2.1 | None | SRR6824300 | MDR-TB | lineage4.5 | cn | SRR18910988 | Sensitive | lineage1.2.1.2.1 | None | ERR117723 | HR-TB | lineage4.3.4.2.1 | None | ERR4831850 | HR-TB | lineage4.1.2 | vn | ERR1193795 | HR-TB | lineage4.3.2 | de | SRR1723908 | MDR-TB | lineage4.5 | None | SRR1180242 | Sensitive | lineage1.1.2 | None | ERR4821252 | Sensitive | lineage3 | gb | ERR4816617 | HR-TB | lineage4.1.1.3 | gb | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4814752 | HR-TB | lineage3.1.2.1 | gb | SRR28860046 | Sensitive | lineage1.2.1.2.1 | None | SRR28859782 | Sensitive | lineage3 | None | ERR4815327 | HR-TB | lineage4.1.1.3 | gb | SRR1183142 | Sensitive | lineage1.1.2 | None | SRR5067634 | HR-TB | lineage4.1.2 | vn | SRR1169512 | Sensitive | lineage1.1.2 | None | SRR28046358 | Other | lineage3 | None | SRR1172054 | Sensitive | lineage1.1.2 | None | ERR2653082 | RR-TB | lineage4.3.4.2 | None | SRR15316421 | MDR-TB | lineage4.2.2 | None | SRR1723907 | MDR-TB | lineage4.5 | None | SRR30182457 | HR-TB | lineage1.2.1.2.1 | None | SRR11662308 | MDR-TB | lineage2.1 | None | SRR28045442 | HR-TB | lineage3 | None | ERR550969 | HR-TB | lineage4.3.2 | de | ERR4819100 | HR-TB | lineage4.1.1.3 | None | SAMN03246623 | MDR-TB | lineage4.5 | cn | ERR2179648 | MDR-TB | lineage4.5 | cn |
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