lineage | Count |
---|---|
lineage1.1.2 | 10 |
lineage4.1.1.3 | 1 |
lineage4.3.3 | 4 |
lineage3 | 2 |
lineage1.1.1.1 | 2 |
lineage4.3.2.1 | 2 |
lineage3.1.2.1 | 1 |
lineage4.8 | 9 |
lineage1.1.3.1 | 1 |
lineage4.3.4.2 | 4 |
lineage4.1.2.1 | 1 |
La1 | 1 |
lineage3.1.2 | 1 |
lineage4.4 | 1 |
lineage4.2.2 | 2 |
La1.7.1 | 5 |
spoligotype | Count |
---|---|
None | 47 |
ID | Drug resistance | Lineage | Country iso2 | ERR4816442 | HR-TB | lineage1.1.2 | gb | SRR21658630 | Sensitive | lineage4.1.1.3 | None | ERR4813855 | Pre-XDR-TB | lineage4.3.3 | br | SRR2467268 | HR-TB | lineage1.1.2 | None | SRR3085514 | HR-TB | lineage1.1.2 | None | ERR2512823 | Sensitive | lineage3 | gb | SRR5073692 | Sensitive | lineage1.1.1.1 | vn | ERR2512819 | Sensitive | lineage4.3.2.1 | gb | ERR3276081 | HR-TB | lineage4.3.3 | nl | ERR2510310 | MDR-TB | lineage3.1.2.1 | pk | SRR5065310 | Sensitive | lineage1.1.1.1 | vn | ERR2514327 | HR-TB | lineage4.8 | None | SAMN03648080 | HR-TB | lineage1.1.2 | None | ERR2514473 | Sensitive | lineage4.3.2.1 | gb | ERR278520 | HR-TB | lineage1.1.2 | None | SRR6045545 | HR-TB | lineage4.8 | gb | SRR5818613 | HR-TB | lineage1.1.2 | dj | ERR4827489 | HR-TB | lineage4.8 | None | SRR6797729 | Sensitive | lineage1.1.3.1 | None | SRR6257080 | MDR-TB | lineage4.8 | None | ERR1213872 | Pre-XDR-TB | lineage4.3.3 | br | ERR3132110 | Pre-XDR-TB | lineage4.3.3 | None | ERR1034812 | HR-TB | lineage4.3.4.2 | pt | ERR1034864 | HR-TB | lineage4.3.4.2 | pt | ERR10395959 | HR-TB | lineage4.3.4.2 | None | ERR117646 | HR-TB | lineage1.1.2 | None | ERR10969189 | HR-TB | lineage4.3.4.2 | None | SRR14782208 | Sensitive | lineage4.1.2.1 | None | ERR386879 | HR-TB | lineage1.1.2 | None | SRR10380146 | HR-TB | lineage4.8 | None | SRR11294527 | HR-TB | La1 | None | ERR4797978 | MDR-TB | lineage3 | in | ERR4798323 | MDR-TB | lineage3.1.2 | in | ERR768022 | HR-TB | lineage4.4 | th | ERR9125273 | HR-TB | lineage4.2.2 | None | ERR9125568 | Other | La1.7.1 | None | SRR11294525 | Other | La1.7.1 | None | SRR11294535 | Other | La1.7.1 | None | SRR11294544 | Other | La1.7.1 | None | SRR14781854 | HR-TB | lineage4.8 | None | SRR14782404 | HR-TB | lineage4.8 | None | SRR14802227 | HR-TB | lineage4.8 | None | SRR2100907 | HR-TB | lineage1.1.2 | None | SRR16058155 | Other | La1.7.1 | None | SRR16058388 | HR-TB | lineage4.2.2 | None | SRR18213791 | HR-TB | lineage1.1.2 | None | SRR18714762 | HR-TB | lineage4.8 | None |
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