lineage | Count |
---|---|
lineage4.1.2.1 | 93 |
lineage3.1.1 | 2 |
lineage2.1 | 35 |
lineage4.3.4.2.1 | 1 |
1 | |
lineage4.3.2;lineage4.1.2.1 | 1 |
lineage4.1 | 1 |
lineage4.4.2 | 3 |
lineage4.1.2 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 139 |
ID | Drug resistance | Lineage | Country iso2 | ERR4811881 | HR-TB | lineage4.1.2.1 | pe | ERR4811743 | HR-TB | lineage4.1.2.1 | pe | ERR4811854 | MDR-TB | lineage4.1.2.1 | pe | ERR4812102 | HR-TB | lineage4.1.2.1 | None | ERR4811906 | HR-TB | lineage4.1.2.1 | pe | ERR751364 | HR-TB | lineage4.1.2.1 | pe | ERR6866799 | MDR-TB | lineage4.1.2.1 | None | ERR6866809 | HR-TB | lineage4.1.2.1 | None | ERR6879045 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4812220 | HR-TB | lineage4.1.2.1 | pe | ERR4812360 | HR-TB | lineage4.1.2.1 | pe | ERR4812441 | HR-TB | lineage4.1.2.1 | pe | ERR4812446 | HR-TB | lineage4.1.2.1 | pe | ERR751391 | HR-TB | lineage4.1.2.1 | pe | ERR751479 | HR-TB | lineage4.1.2.1 | pe | ERR775333 | HR-TB | lineage4.1.2.1 | pe | ERR751495 | HR-TB | lineage4.1.2.1 | pe | ERR751532 | HR-TB | lineage4.1.2.1 | pe | ERR779866 | HR-TB | lineage4.1.2.1 | pe | ERR775334 | HR-TB | lineage4.1.2.1 | pe | ERR775376 | MDR-TB | lineage4.1.2.1 | pe | ERR9029869 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10808353 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9125702 | HR-TB | lineage3.1.1 | None | SRR10808391 | MDR-TB | lineage4.1.2.1 | None | SRR10808369 | MDR-TB | lineage4.1.2.1 | None | SRR10808476 | HR-TB | lineage4.1.2.1 | None | SRR10808409 | HR-TB | lineage4.1.2.1 | None | SRR10808514 | HR-TB | lineage4.1.2.1 | None | SRR11715724 | Pre-XDR-TB | lineage2.1 | None | SRR10808539 | MDR-TB | lineage4.1.2.1 | None | SRR10808626 | MDR-TB | lineage4.1.2.1 | None | SRR11715725 | Pre-XDR-TB | lineage2.1 | None | SRR11715720 | Pre-XDR-TB | lineage2.1 | None | SRR11715722 | Pre-XDR-TB | lineage2.1 | None | SRR11828975 | Pre-XDR-TB | lineage2.1 | th | SRR11828982 | Pre-XDR-TB | lineage2.1 | th | SRR11828973 | Pre-XDR-TB | lineage2.1 | th | SRR11828974 | Pre-XDR-TB | lineage2.1 | th | SRR11828976 | Pre-XDR-TB | lineage2.1 | th | SRR11828989 | Pre-XDR-TB | lineage2.1 | th | SRR11828983 | Pre-XDR-TB | lineage2.1 | th | SRR11828990 | Pre-XDR-TB | lineage2.1 | None | SRR11828988 | Pre-XDR-TB | lineage2.1 | None | SRR11828987 | Pre-XDR-TB | lineage2.1 | None | SRR12072600 | Pre-XDR-TB | lineage2.1 | None | SRR12072597 | Pre-XDR-TB | lineage2.1 | None | SRR12072598 | Pre-XDR-TB | lineage2.1 | None | SRR12072599 | Pre-XDR-TB | lineage2.1 | None | SRR13870385 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13870372 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR16058187 | HR-TB | lineage3.1.1 | None | SRR13870394 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR15217982 | HR-TB | lineage4.1.2.1 | None | SRR13870413 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813717 | MDR-TB | lineage4.1.2.1 | None | SRR3205958 | Pre-XDR-TB | lineage2.1 | None | ERR161060 | HR-TB | lineage4.3.4.2.1 | mw | ERR4812773 | HR-TB | lineage4.1.2.1 | None | SRR3205959 | Pre-XDR-TB | lineage2.1 | None | ERR4812869 | Pre-XDR-TB | None | ERR4812769 | HR-TB | lineage4.3.2;lineage4.1.2.1 | pe | ERR4812927 | HR-TB | lineage4.1.2.1 | pe | ERR4812926 | HR-TB | lineage4.1.2.1 | pe | ERR4813077 | HR-TB | lineage4.1.2.1 | pe | ERR4812943 | HR-TB | lineage4.1.2.1 | pe | ERR4812952 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813095 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813096 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813104 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4813126 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813117 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813124 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813133 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813132 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813177 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813176 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813387 | MDR-TB | lineage4.1.2.1 | pe | ERR4813200 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813202 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813230 | HR-TB | lineage4.1 | None | ERR4813205 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4813378 | MDR-TB | lineage4.1.2.1 | pe | ERR4813430 | HR-TB | lineage4.1.2.1 | pe | ERR4813557 | HR-TB | lineage4.1.2.1 | None | ERR2510209 | HR-TB | lineage4.1.2.1 | pe | ERR4813635 | HR-TB | lineage4.1.2.1 | None | SRR3732591 | MDR-TB | lineage4.1.2.1 | None | ERR2184253 | MDR-TB | lineage4.1.2.1 | pe | ERR2184472 | MDR-TB | lineage4.1.2.1 | pe | ERR2184494 | HR-TB | lineage4.1.2.1 | pe | SRR1723980 | Pre-XDR-TB | lineage4.4.2 | cn | ERR2510149 | HR-TB | lineage4.1.2.1 | pe | ERR4813625 | HR-TB | lineage4.1.2.1 | None | ERR2184236 | HR-TB | lineage4.1.2.1 | pe | ERR2184273 | MDR-TB | lineage4.1.2.1 | None | ERR2184286 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2184393 | MDR-TB | lineage4.1.2.1 | pe | ERR2184528 | HR-TB | lineage4.1.2.1 | pe | ERR2510161 | HR-TB | lineage4.1.2.1 | pe | ERR2510236 | HR-TB | lineage4.1.2.1 | pe | SRR5114019 | Pre-XDR-TB | lineage2.1 | None | SRR5114017 | Pre-XDR-TB | lineage2.1 | None | SRR5114018 | Pre-XDR-TB | lineage2.1 | None | SRR5114020 | Pre-XDR-TB | lineage2.1 | None | ERR2516623 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR5114021 | Pre-XDR-TB | lineage2.1 | None | ERR2516431 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR5114022 | Pre-XDR-TB | lineage2.1 | None | SRR5535697 | HR-TB | lineage4.1.2 | None | SAMEA2534316 | RR-TB | lineage4.2.1 | uz | ERR2179680 | Pre-XDR-TB | lineage4.4.2 | cn | ERR2516738 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR5709887 | Pre-XDR-TB | lineage2.1 | th | SRR5709872 | Pre-XDR-TB | lineage2.1 | th | SRR5709762 | Pre-XDR-TB | lineage2.1 | th | SRR5709934 | Pre-XDR-TB | lineage2.1 | th | SRR5709899 | Pre-XDR-TB | lineage2.1 | th | SRR5709764 | Pre-XDR-TB | lineage2.1 | th | SRR5710027 | Pre-XDR-TB | lineage2.1 | th | SRR5709798 | Pre-XDR-TB | lineage2.1 | th | ERR1034789 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR5837708 | Pre-XDR-TB | lineage2.1 | th | SRR7517809 | MDR-TB | lineage4.1.2.1 | pe | SRR6824667 | Pre-XDR-TB | lineage4.4.2 | cn | ERR1034731 | HR-TB | lineage4.1.2.1 | pe | ERR3287479 | HR-TB | lineage4.1.2.1 | pe | ERR3287375 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287419 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287450 | MDR-TB | lineage4.1.2.1 | pe | ERR3287674 | HR-TB | lineage4.1.2.1 | pe | ERR3287547 | HR-TB | lineage4.1.2.1 | None | ERR3287585 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3287820 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4423707 | HR-TB | lineage4.1.2.1 | None | ERR3287711 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3287862 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR3287871 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4423718 | MDR-TB | lineage4.1.2.1 | None |
---|