lineage | Count |
---|---|
lineage4.8 | 66 |
lineage1.1.3.1 | 1 |
lineage4.4.1.1 | 2 |
lineage3.1.1 | 1 |
lineage1.2.1.2.1 | 2 |
lineage2.2.1;lineage1.1.1.1 | 1 |
lineage3 | 1 |
lineage4.1.2.1 | 1 |
1 | |
lineage1.1.2 | 1 |
lineage2.2.1 | 1 |
lineage4 | 1 |
spoligotype | Count |
---|---|
None | 79 |
ID | Drug resistance | Lineage | Country iso2 | ERR11081506 | HR-TB | lineage4.8 | None | ERR11068188 | HR-TB | lineage4.8 | None | ERR11080962 | Sensitive | lineage4.8 | None | SRR23861774 | HR-TB | lineage4.8 | None | ERR11081568 | Sensitive | lineage4.8 | None | SRR23861850 | Sensitive | lineage4.8 | None | SRR23861769 | Sensitive | lineage4.8 | None | SRR23861812 | Sensitive | lineage4.8 | None | SRR23861832 | Sensitive | lineage4.8 | None | SRR23861818 | HR-TB | lineage4.8 | None | SRR23861907 | MDR-TB | lineage4.8 | None | SRR23861855 | Sensitive | lineage4.8 | None | SRR23862133 | Sensitive | lineage4.8 | None | SRR23861977 | Sensitive | lineage4.8 | None | SRR23861994 | HR-TB | lineage4.8 | None | SRR23862077 | Sensitive | lineage4.8 | None | SRR23862187 | Sensitive | lineage4.8 | None | SRR23862141 | Sensitive | lineage4.8 | None | SRR6797703 | HR-TB | lineage1.1.3.1 | None | ERR11243572 | MDR-TB | lineage4.8 | None | ERR2660547 | Sensitive | lineage4.4.1.1 | None | ERR2512377 | Other | lineage3.1.1 | no | SAMN02419684 | Sensitive | lineage4.8 | by | SRR5153252 | MDR-TB | lineage4.8 | None | SRR3544750 | Sensitive | lineage4.8 | None | ERR550768 | Sensitive | lineage4.8 | de | SRR5152928 | Sensitive | lineage4.8 | None | ERR3132156 | MDR-TB | lineage1.2.1.2.1 | None | ERR4830345 | Sensitive | lineage2.2.1;lineage1.1.1.1 | vn | ERR4831487 | Pre-XDR-TB | lineage3 | None | SRR6785385 | Sensitive | lineage4.8 | None | SRR7516378 | HR-TB | lineage4.8 | None | SRR7516437 | MDR-TB | lineage4.8 | None | SRR7516457 | Sensitive | lineage4.8 | None | ERR1213909 | MDR-TB | lineage1.2.1.2.1 | ph | ERR11043096 | HR-TB | lineage4.1.2.1 | None | ERR4553910 | MDR-TB | None | ERR7902770 | MDR-TB | lineage1.1.2 | None | ERR5865082 | MDR-TB | lineage4.8 | None | ERR5865084 | MDR-TB | lineage4.8 | None | ERR5865094 | MDR-TB | lineage4.8 | None | ERR5865092 | MDR-TB | lineage4.8 | None | ERR5865113 | MDR-TB | lineage4.8 | None | ERR5865114 | MDR-TB | lineage4.8 | None | ERR5865112 | MDR-TB | lineage4.8 | None | ERR5865115 | MDR-TB | lineage4.8 | None | ERR5865317 | MDR-TB | lineage4.8 | None | ERR5865316 | MDR-TB | lineage4.8 | None | ERR5866248 | RR-TB | lineage4.8 | None | ERR7821102 | Sensitive | lineage4.4.1.1 | None | ERR5865081 | MDR-TB | lineage4.8 | None | ERR5865083 | MDR-TB | lineage4.8 | None | ERR5865093 | MDR-TB | lineage4.8 | None | ERR5865095 | MDR-TB | lineage4.8 | None | ERR5866247 | RR-TB | lineage4.8 | None | ERR5866249 | RR-TB | lineage4.8 | None | ERR5917763 | Sensitive | lineage4.8 | by | SRR11033631 | Sensitive | lineage4.8 | None | SRR11033708 | Sensitive | lineage4.8 | None | SRR11972266 | RR-TB | lineage2.2.1 | None | SRR18714757 | HR-TB | lineage4.8 | None | SRR18714996 | Sensitive | lineage4.8 | None | SRR18715229 | HR-TB | lineage4.8 | None | SRR18715242 | HR-TB | lineage4.8 | None | SRR18715353 | HR-TB | lineage4.8 | None | SRR18715443 | HR-TB | lineage4.8 | None | SRR11033671 | Sensitive | lineage4.8 | None | SRR11033723 | Sensitive | lineage4.8 | None | SRR1169117 | Sensitive | lineage4.8 | None | SRR1172121 | Sensitive | lineage4 | None | SRR16088135 | Sensitive | lineage4.8 | None | SRR16088393 | Sensitive | lineage4.8 | None | SRR18714976 | Sensitive | lineage4.8 | None | SRR18714997 | HR-TB | lineage4.8 | None | SRR18715056 | HR-TB | lineage4.8 | None | SRR18715171 | Sensitive | lineage4.8 | None | SRR18715230 | Sensitive | lineage4.8 | None | SRR18715243 | Sensitive | lineage4.8 | None | SRR18715451 | HR-TB | lineage4.8 | None |
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