Rv3919c - p.Pro75Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
84 Sensitive
5 RR-TB
47 HR-TB
127 MDR-TB
58 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 15 |
| lineage3 | 29 |
| lineage4.1.1 | 85 |
| lineage4.6.2.2 | 3 |
| lineage4 | 2 |
| lineage1.1.2 | 16 |
| lineage1.2.2.2 | 19 |
| lineage3.1.3 | 5 |
| lineage1.1.1.1 | 6 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.1.2;lineage3 | 1 |
| lineage4.7 | 2 |
| lineage2.2.1 | 3 |
| lineage4.1.2.1 | 31 |
| lineage4.1 | 5 |
| lineage4.3.3 | 3 |
| lineage4.2.1.1 | 4 |
| lineage1.2.1.2.1 | 9 |
| lineage4.3.2 | 4 |
| lineage4.4.1.1 | 2 |
| lineage1.1.3.1 | 8 |
| lineage3.1 | 4 |
| lineage4.1.1.3 | 7 |
| lineage3.1.2 | 10 |
| lineage1.1.2;lineage2.2.1 | 1 |
| lineage4.9 | 2 |
| lineage4.4.2 | 2 |
| lineage4.6.1.2 | 11 |
| lineage3.1.1 | 2 |
| lineage4.1.1;lineage4.1.2.1 | 1 |
| lineage4.2.2 | 3 |
| lineage1.1.2;lineage4.9 | 1 |
| lineage4.4 | 3 |
| lineage4.2.1 | 2 |
| lineage4.1.1;lineage4.3.3 | 1 |
| lineage4.5 | 2 |
| lineage3;lineage4.2.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.3.2.1 | 6 |
| lineage4.1.1;lineage4.3.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.3 | 1 |
| La1.8.1 | 1 |
| lineage1.1.1 | 1 |
| lineage1.1.3.3;lineage4 | 2 |
| 1 | |
| lineage2.1 | 1 |
| lineage3;lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 325 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11775622 | MDR-TB | lineage4.8 | None | SRR28044896 | MDR-TB | lineage3 | None | ERR7910882 | MDR-TB | lineage4.1.1 | pe | ERR1679657 | Sensitive | lineage4.6.2.2 | ng | ERR4813075 | Pre-XDR-TB | lineage4.1.1 | pe | ERR4813137 | Pre-XDR-TB | lineage4.1.1 | None | ERR4813472 | Pre-XDR-TB | lineage4.1.1 | pe | ERR4812816 | MDR-TB | lineage4.1.1 | None | ERR775319 | HR-TB | lineage4 | pe | SRR13870381 | Pre-XDR-TB | lineage4.1.1 | None | ERR4820822 | HR-TB | lineage1.1.2 | None | SRR13870373 | Pre-XDR-TB | lineage4.1.1 | None | SRR13870393 | Pre-XDR-TB | lineage4.1.1 | None | SRR2100231 | MDR-TB | lineage1.2.2.2 | None | SRR2100850 | HR-TB | lineage3 | None | SRR2100920 | MDR-TB | lineage1.2.2.2 | None | ERR2516471 | MDR-TB | lineage1.1.2 | nl | ERR4817195 | Sensitive | lineage3 | gb | ERR4820631 | Sensitive | lineage1.1.2 | gb | ERR2514202 | Sensitive | lineage1.1.2 | gb | SRR6045947 | Sensitive | lineage3.1.3 | gb | SRR8217901 | MDR-TB | lineage1.1.1.1 | None | SRR25827701 | MDR-TB | lineage1.1.2 | None | SRR21689962 | Sensitive | lineage4.2.2.2 | None | SRR15399236 | MDR-TB | lineage4.3.4.1 | None | SRR25827445 | MDR-TB | lineage1.1.2;lineage3 | None | ERR2041701 | MDR-TB | lineage4.7 | None | SRR5065348 | HR-TB | lineage1.1.1.1 | vn | ERR13290931 | MDR-TB | lineage2.2.1 | None | ERR13291693 | Sensitive | lineage4.1.2.1 | None | SRR5067332 | Sensitive | lineage1.1.1.1 | vn | SRR3725714 | MDR-TB | lineage4.1 | None | ERR11067510 | Sensitive | lineage4.3.3 | None | ERR10465831 | Sensitive | lineage4.1.2.1 | None | ERR5866283 | MDR-TB | lineage4.2.1.1 | None | SRR6045696 | Sensitive | lineage3.1.3 | None | SRR26112214 | Sensitive | lineage4.1.1 | None | ERR270748 | HR-TB | lineage3 | None | SRR24827282 | HR-TB | lineage1.2.2.2 | None | ERR6336788 | Sensitive | lineage1.2.1.2.1 | None | ERR776471 | MDR-TB | lineage4.3.2 | None | SRR21710725 | MDR-TB | lineage4.4.1.1 | None | DRR099693 | Sensitive | lineage1.1.1.1 | None | SRR1162481 | MDR-TB | lineage4.1 | None | ERR11043401 | Sensitive | lineage4.1.2.1 | None | DRR189062 | HR-TB | lineage1.2.1.2.1 | None | DRR261054 | Sensitive | lineage1.1.1.1 | None | ERR13252856 | HR-TB | lineage1.2.1.2.1 | None | SRR21685334 | Sensitive | lineage4.1.2.1 | None | ERR10465889 | HR-TB | lineage4.8 | None | ERR4813150 | Pre-XDR-TB | lineage4.1.1 | None | SRR16370494 | MDR-TB | lineage4.1.1 | None | ERR4813615 | MDR-TB | lineage4.1.1 | None | SRR29017171 | Pre-XDR-TB | lineage1.1.3.1 | None | ERR278533 | MDR-TB | lineage1.2.2.2 | None | SRR29056243 | HR-TB | lineage1.2.2.2 | None | SRR28858602 | MDR-TB | lineage1.2.1.2.1 | None | ERR11083156 | Sensitive | lineage4.1.2.1 | None | ERR688023 | Pre-XDR-TB | lineage3.1 | None | SRR19267896 | HR-TB | lineage1.2.2.2 | None | ERR11080930 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29017595 | Pre-XDR-TB | lineage3.1.2 | None | SRR7068884 | HR-TB | lineage1.2.2.2 | None | ERR13260637 | Pre-XDR-TB | lineage4.1.1 | None | ERR13286035 | Pre-XDR-TB | lineage4.8 | None | ERR13284813 | MDR-TB | lineage4.3.3 | None | ERR7911341 | MDR-TB | lineage4.1.1 | pe | ERR13267610 | Sensitive | lineage4.1.2.1 | None | SRR21239906 | HR-TB | lineage4.4.1.1 | None | ERR867539 | HR-TB | lineage3 | None | ERR13260196 | MDR-TB | lineage4.1.1 | None | ERR13273167 | HR-TB | lineage3.1.2 | None | SRR21689701 | Sensitive | lineage4.1.2.1 | None | ERR7902718 | Sensitive | lineage1.1.2 | None | ERR4813147 | Pre-XDR-TB | lineage4.1.1 | None | ERR13272987 | Sensitive | lineage3 | None | SAMEA2535274 | Sensitive | lineage4.1.2.1 | None | ERR12117902 | Pre-XDR-TB | lineage4.1.1 | None | SRR29055409 | MDR-TB | lineage4.1.1.3 | None | ERR12117914 | Pre-XDR-TB | lineage4.1.1 | None | SRR29341575 | Sensitive | lineage3 | None | ERR13285056 | MDR-TB | lineage4.1.2.1 | None | ERR4797976 | Sensitive | lineage1.1.2;lineage2.2.1 | in | ERR4798662 | HR-TB | lineage1.1.2 | in | ERR4796715 | HR-TB | lineage3 | in | SRR29385496 | Other | lineage2.2.1 | None | ERR13289679 | Sensitive | lineage3.1.3 | None | ERR7737893 | MDR-TB | lineage4.8 | None | ERR13260877 | MDR-TB | lineage4.8 | None | ERR13260644 | Pre-XDR-TB | lineage4.1.1 | None | ERR4798140 | HR-TB | lineage3 | in | SRR29772619 | MDR-TB | lineage1.1.2 | None | SRR23071989 | Sensitive | lineage4.9 | None | SRR28859973 | Sensitive | lineage4.1.1 | None | ERR7910876 | MDR-TB | lineage4.1.1 | None | ERR4813341 | Pre-XDR-TB | lineage4.1.1 | pe | ERR4813361 | Pre-XDR-TB | lineage4.1.1 | None | ERR4813399 | MDR-TB | lineage4.1.1 | pe | ERR4813456 | Pre-XDR-TB | lineage4.1.1 | pe | SRR15368749 | MDR-TB | lineage4.4.2 | None | ERR768003 | Other | lineage1.2.1.2.1 | th | ERR3287709 | MDR-TB | lineage4.1.1 | pe | ERR3287653 | HR-TB | lineage4.1.1 | pe | ERR3287652 | HR-TB | lineage4.1.1 | pe | SRR22461582 | MDR-TB | lineage4.1.1 | None | ERR718534 | HR-TB | lineage1.2.1.2.1 | th | ERR3287724 | MDR-TB | lineage4.1.1 | pe | ERR4812803 | MDR-TB | lineage4.1.1 | None | ERR4797096 | MDR-TB | lineage3.1.2 | None | ERR4812900 | MDR-TB | lineage4.1.1 | pe | ERR7910861 | MDR-TB | lineage4.1.1 | pe | ERR7910866 | MDR-TB | lineage4.1.1 | pe | SRR22461690 | MDR-TB | lineage4.1.1 | None | SRR28409319 | Sensitive | lineage4.1.2.1 | None | ERR7911340 | Pre-XDR-TB | lineage4.1.1 | pe | ERR2707223 | MDR-TB | lineage4.6.1.2 | cd | ERR2707193 | RR-TB | lineage4.6.1.2 | cd | ERR2706960 | MDR-TB | lineage4.6.1.2 | cd | ERR4812975 | MDR-TB | lineage4.1.1 | pe | ERR4812982 | MDR-TB | lineage4.1.1 | pe | ERR4812985 | MDR-TB | lineage4.1.1 | pe | ERR4813008 | MDR-TB | lineage4.1.1 | pe | ERR4813330 | Pre-XDR-TB | lineage4.1.1 | None | ERR4829982 | RR-TB | lineage4.6.2.2 | None | ERR046858 | Sensitive | lineage3.1.1 | gb | ERR4813003 | MDR-TB | lineage4.1.1 | None | ERR779904 | MDR-TB | lineage4.1.1;lineage4.1.2.1 | pe | SRR30340073 | Sensitive | lineage4.2.2 | None | ERR4813308 | MDR-TB | lineage4.1.1 | None | SRR1162691 | MDR-TB | lineage4.1 | None | SRR2099974 | MDR-TB | lineage1.2.2.2 | None | SRR2100840 | HR-TB | lineage3.1.2 | None | ERR1199123 | MDR-TB | lineage4.6.1.2 | cd | ERR1199124 | RR-TB | lineage4.6.1.2 | cd | ERR2516912 | Pre-XDR-TB | lineage1.2.2.2 | gb | ERR2517078 | MDR-TB | lineage1.2.2.2 | gb | ERR2516526 | MDR-TB | lineage4.1.2.1 | pe | ERR4816206 | Sensitive | lineage1.1.2;lineage4.9 | gb | ERR4816588 | Sensitive | lineage4.4 | gb | ERR2513776 | Sensitive | lineage1.1.3.1 | gb | ERR2041805 | MDR-TB | lineage4.2.1 | rs | ERR2041682 | MDR-TB | lineage4.2.1 | rs | ERR9657199 | Sensitive | lineage1.2.2.2 | None | SRR28170701 | MDR-TB | lineage4.1.1.3 | None | SRR22461581 | MDR-TB | lineage4.1.1;lineage4.3.3 | None | SRR5341253 | MDR-TB | lineage4.2.2 | in | SRR29231002 | RR-TB | lineage4.6.1.2 | None | ERR13260643 | Pre-XDR-TB | lineage4.1.1 | None | SRR3105748 | MDR-TB | lineage3 | None | SRR18289169 | Sensitive | lineage1.1.2 | None | ERR2179782 | MDR-TB | lineage4.5 | cn | SRR7069064 | Sensitive | lineage3.1.3 | None | SRR16370664 | HR-TB | lineage1.2.2.2 | None | SRR6964631 | Other | lineage3;lineage4.2.2 | None | ERR4820555 | Sensitive | lineage1.1.2 | None | SRR16370476 | MDR-TB | lineage4.1.1 | None | ERR6866357 | Sensitive | lineage4.1.2.1 | None | ERR9993124 | MDR-TB | lineage4.8 | None | SRR3105780 | MDR-TB | lineage3 | None | ERR5866281 | MDR-TB | lineage4.2.1.1 | None | ERR4813626 | Pre-XDR-TB | lineage4.1.1 | None | ERR3256210 | MDR-TB | lineage1.2.1.2.1 | ph | ERR11044518 | Sensitive | lineage3 | None | ERR4553952 | RR-TB | lineage1.1.3.1 | None | ERR12268416 | Sensitive | lineage4.1.1.1 | None | ERR776663 | MDR-TB | lineage4.3.2 | None | SRR21676303 | Sensitive | lineage1.2.1.2.1 | None | SRR26112614 | Sensitive | lineage4.1.1 | None | SRR29053114 | Sensitive | lineage1.2.1.2.1 | None | SRR29056001 | HR-TB | lineage1.2.2.2 | None | ERR4972584 | MDR-TB | lineage4.3.2 | None | SRR28351169 | Pre-XDR-TB | lineage3.1.2 | None | ERR13260319 | Pre-XDR-TB | lineage4.1.1 | None | ERR6866031 | MDR-TB | lineage4.1.1 | None | SRR29126261 | Sensitive | lineage3 | None | SRR28859779 | HR-TB | lineage1.1.3.1 | None | ERR13290208 | Sensitive | lineage3.1.3 | None | ERR2199811 | Sensitive | lineage4.1.2.1 | None | ERR4178238 | Sensitive | lineage4.1.2.1 | None | ERR4813127 | Pre-XDR-TB | lineage4.1.1 | None | ERR13292231 | Sensitive | lineage3 | None | ERR13260645 | MDR-TB | lineage4.1.1 | None | SRR28394014 | Pre-XDR-TB | lineage4.1.1 | None | ERR688035 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR6866915 | Sensitive | lineage4.1.2.1 | None | ERR13261615 | Pre-XDR-TB | lineage4.1.1 | None | SRR13870383 | Pre-XDR-TB | lineage4.1.1 | None | SRR18715109 | Sensitive | lineage4.8 | None | ERR270732 | HR-TB | lineage3.1.2 | None | SRR28045200 | Sensitive | lineage3 | None | SRR28046331 | Pre-XDR-TB | lineage3 | None | ERR3132195 | MDR-TB | lineage4.6.1.2 | None | ERR13291417 | Sensitive | lineage4.1.2.1 | None | ERR13261662 | Pre-XDR-TB | lineage4.1.1 | None | SRR10808814 | MDR-TB | lineage4.1.1 | None | SRR13870369 | Pre-XDR-TB | lineage4.1.1 | None | ERR867547 | HR-TB | lineage3 | None | ERR4797626 | MDR-TB | lineage3.1.2 | in | ERR11050405 | HR-TB | lineage5.1.4 | None | ERR13260149 | MDR-TB | lineage4.3.2 | None | ERR4813597 | HR-TB | lineage4.1.2.1 | None | ERR4831383 | Sensitive | lineage4.8 | de | ERR11466574 | MDR-TB | lineage4.3.2.1 | None | SRR29231842 | MDR-TB | lineage4.6.1.2 | None | ERR4799831 | Pre-XDR-TB | lineage3.1.2 | in | ERR13260641 | Pre-XDR-TB | lineage4.1.1 | None | SRR23340025 | MDR-TB | lineage4.8 | None | ERR11465515 | MDR-TB | lineage4.3.2.1 | None | ERR11082097 | MDR-TB | lineage4.1.2.1 | None | ERR553285 | Sensitive | lineage4.1.2.1 | None | ERR4821789 | Sensitive | lineage1.1.2 | None | ERR4813120 | Pre-XDR-TB | lineage4.1.1;lineage4.3.2 | None | ERR4813140 | Pre-XDR-TB | lineage4.1.1 | None | ERR270664 | MDR-TB | lineage1.2.2.2 | None | ERR2184684 | MDR-TB | lineage4.1.1 | pe | ERR3287731 | MDR-TB | lineage4.1.1 | pe | ERR4812833 | MDR-TB | lineage4.1.1 | pe | SRR28393857 | Sensitive | lineage4.1.2.1 | None | SRR28045074 | Sensitive | lineage3 | None | ERR1034603 | Pre-XDR-TB | lineage4.1.1.3 | pk | ERR4813021 | MDR-TB | lineage4.1.1 | None | SRR28046330 | Pre-XDR-TB | lineage3 | None | ERR4813454 | MDR-TB | lineage4.1.1 | pe | ERR4831466 | MDR-TB | lineage4.1.1.3 | None | ERR1034589 | Pre-XDR-TB | lineage3.1 | pk | ERR1034591 | Pre-XDR-TB | lineage3.1 | pk | ERR4829771 | HR-TB | lineage4.1.2.1 | it | ERR775307 | HR-TB | lineage4 | pe | ERR4812889 | Pre-XDR-TB | lineage4.1.1 | pe | ERR046857 | Sensitive | lineage3.1.1 | gb | ERR4813325 | MDR-TB | lineage4.1.1 | None | ERR11067417 | Sensitive | lineage3 | None | ERR1654656 | MDR-TB | lineage4.6.1.2 | None | ERR6865706 | MDR-TB | lineage4.1.2.1 | None | SRR15506896 | HR-TB | lineage1.1.3.1 | None | SRR12882118 | HR-TB | lineage1.2.1.2 | None | SRR7341702 | HR-TB | lineage4.1.2.1 | ro | SRR7898223 | MDR-TB | lineage1.1.3 | in | ERR4816726 | Sensitive | lineage1.1.2 | gb | ERR4816870 | Sensitive | lineage1.1.2 | gb | ERR4818480 | HR-TB | lineage3 | gb | ERR2514747 | HR-TB | lineage1.2.2.2 | gb | ERR2515756 | Pre-XDR-TB | lineage4.8 | za | ERR553284 | Sensitive | lineage4.1.2.1 | sz | SRR1792170 | Other | La1.8.1 | None | ERR7737889 | MDR-TB | lineage4.8 | None | SRR17406772 | Sensitive | lineage3 | None | SRR26112455 | HR-TB | lineage4.1.2.1 | None | ERR11080924 | Sensitive | lineage4.8 | None | SRR21732342 | Sensitive | lineage1.1.1 | None | ERR11466511 | MDR-TB | lineage4.3.2.1 | None | ERR688021 | Pre-XDR-TB | lineage3.1 | None | ERR11044569 | Sensitive | lineage3 | None | ERR13260674 | Pre-XDR-TB | lineage4.1.1 | None | SRR5065236 | HR-TB | lineage1.1.1.1 | vn | SRR15316477 | MDR-TB | lineage4.4.2 | None | ERR4813138 | Pre-XDR-TB | lineage4.1.1 | None | SRR21728172 | Sensitive | lineage4.1.1 | None | ERR8774428 | MDR-TB | lineage4.3.2.1 | None | ERR11083100 | HR-TB | lineage3.1.2 | None | SRR1103591 | MDR-TB | lineage4.1 | None | ERR117667 | MDR-TB | lineage1.2.2.2 | None | ERR12117936 | MDR-TB | lineage4.1.1 | None | ERR4813106 | Pre-XDR-TB | lineage4.1.1 | None | ERR4812974 | Pre-XDR-TB | lineage4.1.1 | None | SRR16088293 | Sensitive | lineage4.8 | None | ERR12118013 | MDR-TB | lineage4.1.2.1 | None | ERR4024916 | MDR-TB | lineage4.1.1 | None | SRR12882559 | HR-TB | lineage1.1.3.1 | None | ERR3509861 | HR-TB | lineage1.1.3.1 | None | ERR10610210 | MDR-TB | lineage4.8 | None | ERR2041702 | MDR-TB | lineage4.7 | None | ERR11082777 | Sensitive | lineage4.1.2.1 | None | SRR29017630 | MDR-TB | lineage1.1.3.3;lineage4 | None | ERR9806646 | MDR-TB | lineage4.8 | None | ERR6865834 | Sensitive | lineage4.1.2.1 | None | SRR18909924 | HR-TB | lineage4.4 | None | ERR13260649 | MDR-TB | lineage4.1.1 | None | ERR11082322 | MDR-TB | lineage4.3.3 | None | ERR13292168 | HR-TB | lineage4.4 | None | ERR5866282 | MDR-TB | lineage4.2.1.1 | None | SRR18289198 | Sensitive | lineage1.1.2 | None | ERR4553504 | MDR-TB | None | SRR22424907 | HR-TB | lineage3 | None | ERR4553927 | Pre-XDR-TB | lineage3.1.2 | None | SRR6650239 | Sensitive | lineage1.2.2.2 | None | SRR29017444 | MDR-TB | lineage1.1.3.3;lineage4 | None | ERR13260646 | Pre-XDR-TB | lineage4.1.1 | None | ERR11068316 | MDR-TB | lineage4.5 | None | SRR29440956 | Sensitive | lineage1.1.2 | None | SRR26111938 | HR-TB | lineage4.1.2.1 | None | ERR13260638 | MDR-TB | lineage4.1.1 | None | ERR13260701 | MDR-TB | lineage4.1.1 | None | ERR4813591 | MDR-TB | lineage4.1.1 | None | SRR17658013 | MDR-TB | lineage4.6.1.2 | None | SRR28409612 | Sensitive | lineage3 | None | ERR1679645 | Sensitive | lineage4.6.2.2 | None | SRR28858444 | MDR-TB | lineage4.1.1 | None | ERR7910877 | MDR-TB | lineage4.1.1 | None | SRR18714930 | MDR-TB | lineage4.2.1.1 | None | SRR19276632 | Pre-XDR-TB | lineage4.1.1 | None | ERR4025143 | MDR-TB | lineage4.1.2.1 | None | SRR29231714 | MDR-TB | lineage4.6.1.2 | None | ERR4821910 | Sensitive | lineage1.1.2 | None | ERR13260635 | Pre-XDR-TB | lineage4.1.1 | None | SRR21710933 | Sensitive | lineage4.1.1 | None | ERR13290914 | HR-TB | lineage2.1 | None | ERR11050550 | Sensitive | lineage4.1.2.1 | None | SRR15506895 | HR-TB | lineage1.1.3.1 | None | ERR386892 | MDR-TB | lineage1.2.2.2 | None | SRR10040342 | MDR-TB | lineage2.2.1 | None | SRR28859767 | Sensitive | lineage4.1.1 | None | SRR14088368 | Pre-XDR-TB | lineage3 | None | ERR16022318 | Pre-XDR-TB | lineage3 | None | ERR270685 | MDR-TB | lineage1.2.2.2 | None | ERR4423728 | MDR-TB | lineage4.3.2.1 | None | ERR13285091 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4797182 | Pre-XDR-TB | lineage3;lineage4.8 | in | ERR11081936 | Sensitive | lineage3 | None | ERR4798461 | Sensitive | lineage3 | in | SRR29231031 | Sensitive | lineage4.2.2 | None | ERR4423732 | MDR-TB | lineage4.3.2.1 | None | SAMN02231166 | MDR-TB | lineage4.1 | ml | ERR6866953 | MDR-TB | lineage4.1.1 | None | SRR326119 | Sensitive | lineage4.9 | None |
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