lineage | Count |
---|---|
lineage4.1.1.1 | 1 |
lineage1.1.3.3 | 1 |
lineage3 | 8 |
lineage4.6.2.2 | 1 |
15 | |
lineage6.3.1 | 4 |
lineage1.1.3.1 | 1 |
lineage1.2.1.2 | 1 |
lineage2.2.1 | 2 |
lineage1.1.1.1 | 1 |
lineage4.8 | 2 |
lineage1.2.1.2.1 | 2 |
lineage1.2.2.2 | 1 |
lineage1.1.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.1.1;lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 43 |
ID | Drug resistance | Lineage | Country iso2 | SRR13355782 | MDR-TB | lineage4.1.1.1 | None | SRR11662249 | MDR-TB | lineage1.1.3.3 | None | SRR4423138 | Pre-XDR-TB | lineage3 | None | SRR24783280 | RR-TB | lineage4.6.2.2 | None | ERR4553878 | MDR-TB | None | ERR4553829 | MDR-TB | None | ERR4553598 | MDR-TB | None | ERR4553755 | MDR-TB | None | ERR4553840 | MDR-TB | None | ERR4553869 | MDR-TB | None | ERR2510302 | MDR-TB | lineage3 | pk | ERR2510341 | Pre-XDR-TB | lineage3 | pk | ERR4820013 | Other | lineage6.3.1 | None | SRR6797353 | Other | lineage1.1.3.1 | None | SRR6046675 | Other | lineage6.3.1 | gb | ERR718394 | Other | lineage1.2.1.2 | th | ERR4553870 | MDR-TB | lineage2.2.1 | None | SRR7070438 | Other | lineage6.3.1 | None | SRR6797743 | MDR-TB | lineage3 | None | SRR5073590 | Other | lineage1.1.1.1 | vn | ERR4553407 | MDR-TB | None | ERR4553492 | MDR-TB | None | ERR4553417 | MDR-TB | None | ERR11082392 | HR-TB | lineage4.8 | None | ERR4819461 | Other | lineage6.3.1 | gb | ERR751962 | Other | lineage1.2.1.2.1 | th | SRR25340770 | HR-TB | lineage1.2.2.2 | None | SRR4423145 | Pre-XDR-TB | lineage3 | None | ERR4830960 | Pre-XDR-TB | lineage4.8 | np | SRR2101077 | HR-TB | lineage1.1.2 | None | ERR4553653 | MDR-TB | lineage3 | None | ERR4553586 | MDR-TB | lineage3 | None | DRR188902 | Other | lineage2.2.1 | None | ERR4829990 | MDR-TB | lineage4.1.2.1 | None | SRR19320495 | HR-TB | lineage1.2.1.2.1 | None | ERR4553565 | MDR-TB | lineage3 | None | ERR4553596 | MDR-TB | None | ERR4553687 | RR-TB | None | ERR4553432 | HR-TB | None | ERR4553660 | MDR-TB | None | ERR4553571 | MDR-TB | None | ERR4553823 | MDR-TB | None | SRR28394161 | Other | lineage4.1.1;lineage4.1.2 | None |
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