lineage | Count |
---|---|
lineage4.3.3 | 3 |
lineage3.1.2.1 | 4 |
lineage4.1.2.1 | 5 |
lineage4.8 | 2 |
lineage4.4.2 | 4 |
lineage1.2.1.1 | 5 |
lineage4.5 | 2 |
lineage1.2.1.2.1 | 1 |
lineage2.2.2;lineage4.4.2 | 1 |
lineage3 | 5 |
lineage4.1.2 | 1 |
lineage1.1.3.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.8.1 | 6 |
lineage4.6.1.2 | 1 |
lineage2.2.2 | 1 |
lineage4.3.4.2 | 1 |
lineage4.6 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 46 |
ID | Drug resistance | Lineage | Country iso2 | SRR7131110 | HR-TB | lineage4.3.3 | None | SRR2100963 | Sensitive | lineage3.1.2.1 | None | SRR28393907 | MDR-TB | lineage4.1.2.1 | None | SRR14781971 | HR-TB | lineage4.8 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | ERR3276225 | Sensitive | lineage1.2.1.1 | nl | ERR8975061 | HR-TB | lineage4.8 | None | SRR671751 | Pre-XDR-TB | lineage4.5 | cn | ERR2510763 | HR-TB | lineage4.3.3 | it | ERR031450 | Sensitive | lineage1.2.1.1 | None | SRR28409355 | Other | lineage3.1.2.1 | None | SRR21732238 | HR-TB | lineage1.2.1.2.1 | None | ERR386945 | Sensitive | lineage3.1.2.1 | None | SRR29093366 | XDR-TB | lineage2.2.2;lineage4.4.2 | None | SRR28044648 | MDR-TB | lineage3 | None | ERR6866177 | Sensitive | lineage4.1.2 | None | ERR031451 | Sensitive | lineage1.2.1.1 | None | SRR7131263 | HR-TB | lineage4.3.3 | None | SRR19303900 | Sensitive | lineage1.1.3.1 | None | ERR4828714 | Sensitive | lineage1.1.1.1 | vn | ERR718443 | Sensitive | lineage4.4.2 | th | ERR3273089 | MDR-TB | lineage4.5 | None | ERR775355 | MDR-TB | lineage4.1.2.1 | pe | ERR13289349 | HR-TB | lineage4.8.1 | None | ERR8975414 | HR-TB | lineage4.8.1 | None | ERR752206 | Sensitive | lineage4.4.2 | th | SRR28044684 | Pre-XDR-TB | lineage3 | None | SRR28393714 | MDR-TB | lineage4.1.2.1 | None | SRR6896177 | HR-TB | lineage4.8.1 | None | ERR6358706 | MDR-TB | lineage4.6.1.2 | None | ERR11488619 | MDR-TB | lineage4.8.1 | None | ERR3470632 | MDR-TB | lineage3 | None | ERR234272 | Sensitive | lineage1.2.1.1 | None | ERR278586 | Sensitive | lineage3.1.2.1 | None | ERR3470691 | MDR-TB | lineage3 | None | ERR4828461 | HR-TB | lineage2.2.2 | vn | SRR29050882 | MDR-TB | lineage4.3.4.2 | None | SRR28393471 | MDR-TB | lineage4.1.2.1 | None | ERR718303 | Sensitive | lineage4.4.2 | th | ERR2515123 | MDR-TB | lineage4.8.1 | za | ERR8975471 | HR-TB | lineage4.8.1 | None | ERR13265324 | Sensitive | lineage4.6 | None | ERR2510160 | MDR-TB | lineage4.1.2.1 | pe | SRR28045157 | RR-TB | lineage3 | None | SRR29772790 | MDR-TB | lineage4.1.1.3 | None | SRR21690661 | Sensitive | lineage1.2.1.1 | None |
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