Run ID: SRR13986566
Sample name:
Date: 03-04-2023 09:43:57
Number of reads: 1052758
Percentage reads mapped: 85.57
Strain: La1.7.1
Drug-resistance: Other
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
La1 | M.bovis | None | None | 1.0 |
La1.7 | M.bovis | None | None | 1.0 |
La1.7.1 | M.bovis | None | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rrs | 1472644 | n.799C>T | non_coding_transcript_exon_variant | 0.33 | streptomycin |
pncA | 2289073 | p.His57Asp | missense_variant | 1.0 | pyrazinamide |
gid | 4407908 | p.Glu99* | stop_gained | 0.22 | streptomycin |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 5752 | c.513G>A | synonymous_variant | 1.0 |
gyrA | 6406 | c.-896C>T | upstream_gene_variant | 1.0 |
gyrB | 6446 | p.Ala403Ser | missense_variant | 1.0 |
gyrA | 6835 | c.-467C>T | upstream_gene_variant | 0.2 |
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
gyrA | 7437 | p.Asp46Tyr | missense_variant | 0.25 |
gyrA | 7481 | c.180C>T | synonymous_variant | 0.17 |
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 |
gyrA | 7642 | p.Gly114Val | missense_variant | 0.12 |
gyrA | 7678 | p.Ala126Glu | missense_variant | 0.15 |
gyrA | 7887 | p.Glu196* | stop_gained | 0.14 |
gyrA | 8285 | c.984C>T | synonymous_variant | 1.0 |
gyrA | 8327 | c.1026C>T | synonymous_variant | 0.17 |
gyrA | 8751 | p.Ala484Ser | missense_variant | 0.18 |
gyrA | 8940 | p.Ala547Ser | missense_variant | 0.13 |
gyrA | 9143 | c.1842T>C | synonymous_variant | 1.0 |
gyrA | 9217 | p.Asp639Ala | missense_variant | 1.0 |
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 |
fgd1 | 491281 | p.Asp167Asn | missense_variant | 0.22 |
fgd1 | 491284 | p.Gly168Arg | missense_variant | 0.2 |
fgd1 | 491296 | p.Val172Ile | missense_variant | 0.2 |
fgd1 | 491645 | p.Ser288* | stop_gained | 0.12 |
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 |
mshA | 575359 | c.12G>A | synonymous_variant | 0.14 |
mshA | 576286 | c.939C>A | synonymous_variant | 0.12 |
mshA | 576729 | p.Ser461Leu | missense_variant | 0.29 |
mshA | 576771 | p.Arg475His | missense_variant | 0.15 |
ccsA | 619705 | c.-186G>A | upstream_gene_variant | 0.2 |
ccsA | 619868 | c.-23G>A | upstream_gene_variant | 0.15 |
ccsA | 619909 | p.Asn7His | missense_variant | 0.25 |
ccsA | 620028 | c.138G>T | synonymous_variant | 0.25 |
ccsA | 620278 | p.Arg130Cys | missense_variant | 0.33 |
rpoB | 759620 | c.-187A>C | upstream_gene_variant | 0.26 |
rpoB | 759931 | p.Leu42Pro | missense_variant | 0.13 |
rpoB | 760815 | p.Glu337* | stop_gained | 0.13 |
rpoB | 761254 | p.Pro483His | missense_variant | 0.2 |
rpoB | 761433 | p.Asp543Asn | missense_variant | 0.22 |
rpoB | 761791 | p.Arg662His | missense_variant | 0.17 |
rpoB | 762646 | p.Pro947Leu | missense_variant | 0.18 |
rpoB | 763017 | p.Gln1071Lys | missense_variant | 0.12 |
rpoC | 763031 | c.-339T>C | upstream_gene_variant | 1.0 |
rpoC | 763394 | p.Glu9* | stop_gained | 0.17 |
rpoC | 763405 | c.36C>T | synonymous_variant | 0.14 |
rpoC | 763464 | p.Glu32Gly | missense_variant | 0.11 |
rpoC | 763883 | p.Ala172Ser | missense_variant | 0.5 |
rpoC | 763958 | p.Val197Phe | missense_variant | 0.5 |
rpoC | 764335 | c.966G>A | synonymous_variant | 0.14 |
rpoC | 764467 | c.1098C>A | synonymous_variant | 0.14 |
rpoC | 766439 | p.Ile1024Val | missense_variant | 0.11 |
rpoC | 766942 | c.3573C>A | synonymous_variant | 0.12 |
rpoC | 766975 | c.3606C>A | synonymous_variant | 0.2 |
rpoC | 767013 | p.Leu1215Pro | missense_variant | 0.25 |
rpoC | 767061 | p.Arg1231Leu | missense_variant | 0.33 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 |
mmpL5 | 776340 | p.His714Arg | missense_variant | 0.14 |
mmpL5 | 776443 | p.Phe680Leu | missense_variant | 0.12 |
mmpL5 | 776694 | p.Val596Ser | missense_variant | 0.18 |
mmpL5 | 776702 | c.1779C>T | synonymous_variant | 0.17 |
mmpL5 | 776726 | c.1755C>T | synonymous_variant | 0.38 |
mmpL5 | 776746 | p.Arg579Ser | missense_variant | 0.2 |
mmpL5 | 777016 | p.Gly489Arg | missense_variant | 0.14 |
mmpL5 | 777122 | c.1359C>T | synonymous_variant | 0.12 |
mmpL5 | 777128 | c.1353A>G | synonymous_variant | 0.12 |
mmpL5 | 777136 | p.Met449Leu | missense_variant | 0.11 |
mmpL5 | 777270 | p.Gly404Val | missense_variant | 0.25 |
mmpL5 | 778137 | p.Arg115Ile | missense_variant | 0.14 |
mmpR5 | 778319 | c.-671T>C | upstream_gene_variant | 0.1 |
mmpS5 | 778740 | p.Val56Leu | missense_variant | 0.17 |
mmpL5 | 778822 | c.-342C>A | upstream_gene_variant | 0.22 |
mmpS5 | 779615 | c.-710C>G | upstream_gene_variant | 0.12 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rpsL | 781506 | c.-54C>A | upstream_gene_variant | 0.14 |
rplC | 801081 | c.273C>T | synonymous_variant | 0.22 |
rplC | 801248 | p.Arg147His | missense_variant | 0.18 |
fbiC | 1302849 | c.-82G>A | upstream_gene_variant | 0.2 |
fbiC | 1302899 | c.-32A>G | upstream_gene_variant | 1.0 |
fbiC | 1303262 | p.Pro111Leu | missense_variant | 0.17 |
fbiC | 1303403 | p.Ala158Glu | missense_variant | 0.14 |
fbiC | 1303632 | c.702T>C | synonymous_variant | 0.22 |
fbiC | 1303895 | p.Arg322Gln | missense_variant | 0.15 |
fbiC | 1304110 | p.Ala394Ser | missense_variant | 0.14 |
fbiC | 1304413 | p.Val495Met | missense_variant | 0.14 |
fbiC | 1305355 | p.Gly809Ser | missense_variant | 0.12 |
Rv1258c | 1406460 | p.Ala294Val | missense_variant | 0.17 |
Rv1258c | 1406496 | p.Ala282Asp | missense_variant | 0.14 |
Rv1258c | 1406941 | p.Arg134Trp | missense_variant | 0.25 |
Rv1258c | 1407022 | p.Ala107Thr | missense_variant | 0.22 |
Rv1258c | 1407233 | p.Gln36His | missense_variant | 1.0 |
Rv1258c | 1407450 | c.-110G>A | upstream_gene_variant | 0.2 |
embR | 1416435 | p.Ala305Ser | missense_variant | 0.12 |
embR | 1416606 | p.Arg248Cys | missense_variant | 0.2 |
embR | 1416743 | p.Pro202His | missense_variant | 0.12 |
embR | 1416938 | p.His137Arg | missense_variant | 0.17 |
atpE | 1461070 | p.Ala9Asp | missense_variant | 0.5 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1472062 | n.217G>A | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472580 | n.735C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472607 | n.762G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472612 | n.767G>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472616 | n.771G>A | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.33 |
rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472661 | n.816A>G | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472690 | n.845C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472713 | n.868T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472714 | n.869A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472781 | n.936C>T | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472793 | n.948A>T | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472803 | n.958T>A | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472895 | n.1050C>T | non_coding_transcript_exon_variant | 0.33 |
rrs | 1473215 | n.1370A>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1473703 | n.46C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474422 | n.765C>A | non_coding_transcript_exon_variant | 0.33 |
rrl | 1475129 | n.1472G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475154 | n.1497C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475175 | n.1518G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475858 | n.2201T>C | non_coding_transcript_exon_variant | 0.2 |
rrl | 1475866 | n.2209T>A | non_coding_transcript_exon_variant | 0.2 |
rrl | 1476477 | n.2820G>T | non_coding_transcript_exon_variant | 1.0 |
fabG1 | 1673657 | p.Thr73Met | missense_variant | 0.12 |
inhA | 1674423 | p.Leu74Phe | missense_variant | 0.17 |
inhA | 1674846 | c.645C>A | synonymous_variant | 0.33 |
inhA | 1674988 | p.Gly263Ile | missense_variant | 0.2 |
rpsA | 1833937 | p.Glu132Asp | missense_variant | 0.17 |
rpsA | 1834022 | c.481C>T | synonymous_variant | 0.2 |
rpsA | 1834124 | p.Gln195Lys | missense_variant | 0.12 |
rpsA | 1834758 | p.Gly406Val | missense_variant | 0.15 |
rpsA | 1834831 | c.1290G>T | synonymous_variant | 0.12 |
rpsA | 1834859 | p.Ala440Thr | missense_variant | 1.0 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
tlyA | 1918362 | c.423G>A | synonymous_variant | 0.5 |
ndh | 2101759 | p.Gln428His | missense_variant | 0.12 |
ndh | 2103151 | c.-109G>T | upstream_gene_variant | 0.2 |
ndh | 2103173 | c.-132delG | upstream_gene_variant | 1.0 |
ndh | 2103193 | c.-151G>A | upstream_gene_variant | 0.17 |
ndh | 2103205 | c.-163G>T | upstream_gene_variant | 0.2 |
ndh | 2103225 | c.-183A>C | upstream_gene_variant | 0.29 |
katG | 2153996 | p.Ala706Ser | missense_variant | 0.13 |
katG | 2154018 | c.2094C>T | synonymous_variant | 0.22 |
katG | 2154217 | p.Arg632Leu | missense_variant | 0.17 |
katG | 2154591 | c.1521C>A | synonymous_variant | 0.13 |
katG | 2154711 | p.Leu467Phe | missense_variant | 0.13 |
katG | 2154724 | p.Arg463Leu | missense_variant | 1.0 |
katG | 2154826 | p.Pro429Gln | missense_variant | 0.2 |
katG | 2154984 | c.1128G>A | synonymous_variant | 1.0 |
katG | 2155089 | p.Trp341Cys | missense_variant | 0.33 |
katG | 2155403 | p.Gly237Ser | missense_variant | 0.2 |
katG | 2155503 | c.609C>T | synonymous_variant | 1.0 |
katG | 2155710 | p.Ser134Arg | missense_variant | 0.2 |
katG | 2155830 | p.Asp94Glu | missense_variant | 0.5 |
katG | 2156025 | c.87C>A | synonymous_variant | 1.0 |
PPE35 | 2167745 | p.Thr956Arg | missense_variant | 0.5 |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 |
PPE35 | 2167936 | p.Thr893Ala | missense_variant | 0.11 |
PPE35 | 2167937 | c.2676A>C | synonymous_variant | 0.1 |
PPE35 | 2167965 | p.Ala883Gly | missense_variant | 0.12 |
PPE35 | 2167967 | c.2646A>C | synonymous_variant | 0.12 |
PPE35 | 2168011 | p.Ser868Arg | missense_variant | 1.0 |
PPE35 | 2168319 | p.Thr765Ile | missense_variant | 1.0 |
PPE35 | 2168814 | c.1798dupA | frameshift_variant | 1.0 |
PPE35 | 2169180 | p.Pro478His | missense_variant | 0.12 |
PPE35 | 2170518 | p.Asp32Thr | missense_variant | 0.25 |
Rv1979c | 2222173 | p.Ala331Gly | missense_variant | 0.2 |
Rv1979c | 2222212 | p.Ala318Glu | missense_variant | 0.14 |
Rv1979c | 2222308 | p.Asp286Gly | missense_variant | 1.0 |
Rv1979c | 2223026 | p.Ala47Thr | missense_variant | 0.14 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
Rv1979c | 2223336 | c.-172G>T | upstream_gene_variant | 0.14 |
pncA | 2288880 | p.Arg121Gln | missense_variant | 0.13 |
pncA | 2289020 | c.222C>T | synonymous_variant | 1.0 |
pncA | 2289217 | p.Val9Met | missense_variant | 0.15 |
pncA | 2289512 | c.-271G>T | upstream_gene_variant | 0.25 |
pncA | 2289913 | c.-672T>C | upstream_gene_variant | 0.14 |
pncA | 2290219 | c.-978C>A | upstream_gene_variant | 0.17 |
kasA | 2518132 | c.18C>T | synonymous_variant | 1.0 |
kasA | 2518195 | c.81G>T | synonymous_variant | 0.15 |
kasA | 2518411 | c.297C>A | synonymous_variant | 0.14 |
kasA | 2518725 | p.Ala204Val | missense_variant | 0.33 |
kasA | 2518895 | p.Pro261Thr | missense_variant | 0.2 |
kasA | 2519096 | p.Val328Phe | missense_variant | 0.25 |
kasA | 2519180 | p.Val356Met | missense_variant | 0.17 |
kasA | 2519243 | p.Asp377Asn | missense_variant | 0.17 |
eis | 2714240 | p.Arg365Ser | missense_variant | 0.2 |
ahpC | 2725968 | c.-225C>T | upstream_gene_variant | 0.14 |
ahpC | 2726104 | c.-89T>G | upstream_gene_variant | 1.0 |
ahpC | 2726427 | p.Asp79Asn | missense_variant | 0.14 |
folC | 2746166 | p.Ala478Val | missense_variant | 0.18 |
folC | 2746241 | c.1355_1357delCCG | disruptive_inframe_deletion | 0.25 |
folC | 2746453 | c.1146G>T | synonymous_variant | 0.14 |
folC | 2746949 | p.Ala217Val | missense_variant | 0.25 |
folC | 2747320 | c.279C>T | synonymous_variant | 0.17 |
folC | 2747371 | c.228C>A | synonymous_variant | 0.17 |
folC | 2747651 | c.-53C>A | upstream_gene_variant | 0.25 |
folC | 2747754 | c.-156C>G | upstream_gene_variant | 0.18 |
pepQ | 2859380 | p.Gly347Trp | missense_variant | 0.14 |
pepQ | 2859408 | c.1011C>T | synonymous_variant | 0.14 |
pepQ | 2859667 | p.Gln251Arg | missense_variant | 0.12 |
pepQ | 2859693 | c.726C>T | synonymous_variant | 1.0 |
pepQ | 2860083 | c.336C>G | synonymous_variant | 0.14 |
pepQ | 2860151 | p.Ala90Ser | missense_variant | 0.25 |
pepQ | 2860162 | p.Arg86Leu | missense_variant | 0.25 |
ribD | 2986658 | c.-181_-180insGG | upstream_gene_variant | 0.33 |
ribD | 2986710 | c.-129C>G | upstream_gene_variant | 0.2 |
ribD | 2986801 | c.-38G>A | upstream_gene_variant | 0.14 |
ribD | 2986921 | c.88delC | frameshift_variant | 0.17 |
ribD | 2987510 | c.672G>A | synonymous_variant | 0.2 |
ribD | 2987515 | p.Arg226His | missense_variant | 0.2 |
Rv2752c | 3064695 | c.1497A>G | synonymous_variant | 0.13 |
Rv2752c | 3064783 | p.Ser470* | stop_gained | 0.17 |
Rv2752c | 3064894 | p.Ala433Val | missense_variant | 0.12 |
Rv2752c | 3065529 | c.663G>T | synonymous_variant | 0.17 |
Rv2752c | 3065533 | p.Pro220Leu | missense_variant | 0.2 |
Rv2752c | 3065949 | p.His81Gln | missense_variant | 0.33 |
Rv2752c | 3066027 | c.165C>A | synonymous_variant | 0.2 |
thyX | 3067534 | p.Ala138Thr | missense_variant | 0.25 |
thyX | 3067732 | p.Val72Leu | missense_variant | 0.12 |
thyA | 3073860 | c.612C>A | synonymous_variant | 0.12 |
thyA | 3073913 | p.Met187Val | missense_variant | 0.1 |
thyA | 3074565 | c.-94C>A | upstream_gene_variant | 0.17 |
thyA | 3074645 | c.-174T>G | upstream_gene_variant | 0.22 |
ald | 3086728 | c.-92C>T | upstream_gene_variant | 1.0 |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 |
ald | 3086993 | c.174C>A | synonymous_variant | 0.17 |
ald | 3087084 | c.266delA | frameshift_variant | 1.0 |
ald | 3087215 | c.396G>C | synonymous_variant | 0.17 |
ald | 3087560 | c.741C>A | synonymous_variant | 0.25 |
Rv3083 | 3448756 | p.Ile85Phe | missense_variant | 0.25 |
Rv3083 | 3448783 | p.Val94Ile | missense_variant | 1.0 |
Rv3083 | 3449049 | c.546C>G | synonymous_variant | 0.25 |
Rv3083 | 3449054 | p.Gly184Asp | missense_variant | 0.25 |
Rv3083 | 3449058 | c.555C>T | synonymous_variant | 0.25 |
Rv3083 | 3449357 | p.Asn285Ser | missense_variant | 0.17 |
fprA | 3473996 | c.-11_-10insA | upstream_gene_variant | 1.0 |
fprA | 3474353 | p.Gly116Val | missense_variant | 0.14 |
fprA | 3474427 | p.Val141Ile | missense_variant | 1.0 |
fprA | 3475020 | c.1014C>T | synonymous_variant | 0.17 |
fprA | 3475026 | c.1020C>A | synonymous_variant | 0.17 |
fprA | 3475159 | p.Asn385Asp | missense_variant | 1.0 |
fprA | 3475267 | p.Ala421Thr | missense_variant | 0.15 |
Rv3236c | 3612387 | p.Ala244Ser | missense_variant | 0.17 |
Rv3236c | 3613059 | p.Val20Leu | missense_variant | 0.12 |
fbiA | 3640771 | p.Arg77Ser | missense_variant | 0.17 |
fbiA | 3640783 | p.Gln81Lys | missense_variant | 0.12 |
fbiA | 3640913 | p.Pro124His | missense_variant | 0.12 |
fbiB | 3641481 | c.-54G>A | upstream_gene_variant | 0.17 |
fbiB | 3641754 | p.Arg74Cys | missense_variant | 0.2 |
fbiB | 3642013 | p.Gln160Arg | missense_variant | 0.29 |
fbiB | 3642344 | c.810G>T | synonymous_variant | 0.17 |
fbiB | 3642478 | p.Asp315Ala | missense_variant | 1.0 |
alr | 3840380 | p.Met347Ile | missense_variant | 0.12 |
alr | 3840652 | p.Val257Leu | missense_variant | 0.15 |
alr | 3840705 | p.Ala239Glu | missense_variant | 0.25 |
rpoA | 3877794 | c.714G>A | synonymous_variant | 0.25 |
rpoA | 3877976 | p.Val178Leu | missense_variant | 0.17 |
rpoA | 3878566 | c.-59C>T | upstream_gene_variant | 0.25 |
rpoA | 3878630 | c.-124delC | upstream_gene_variant | 1.0 |
clpC1 | 4038403 | c.2302T>C | synonymous_variant | 1.0 |
clpC1 | 4038457 | p.Val750Leu | missense_variant | 0.15 |
clpC1 | 4038740 | c.1965G>A | synonymous_variant | 0.17 |
clpC1 | 4039123 | p.Val528Ile | missense_variant | 0.14 |
clpC1 | 4039199 | c.1506C>G | synonymous_variant | 0.33 |
clpC1 | 4039229 | c.1476C>A | synonymous_variant | 0.14 |
clpC1 | 4039691 | c.1014G>C | synonymous_variant | 0.12 |
clpC1 | 4039926 | p.Arg260His | missense_variant | 0.2 |
clpC1 | 4040002 | p.His235Asn | missense_variant | 0.17 |
clpC1 | 4040144 | c.561G>C | synonymous_variant | 0.17 |
clpC1 | 4040220 | p.Ser162Phe | missense_variant | 0.33 |
panD | 4044230 | p.Ala18Ser | missense_variant | 0.25 |
panD | 4044400 | c.-119G>T | upstream_gene_variant | 0.13 |
embC | 4240080 | p.Pro73Gln | missense_variant | 1.0 |
embC | 4240565 | p.Ile235Val | missense_variant | 0.22 |
embC | 4240575 | p.Val238Ala | missense_variant | 0.22 |
embC | 4240671 | p.Thr270Ile | missense_variant | 1.0 |
embC | 4242302 | p.Leu814Met | missense_variant | 0.22 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
embA | 4242730 | c.-503C>T | upstream_gene_variant | 0.33 |
embA | 4242802 | c.-431G>T | upstream_gene_variant | 0.14 |
embA | 4242970 | c.-263C>T | upstream_gene_variant | 1.0 |
embC | 4243111 | p.Ser1083Arg | missense_variant | 0.12 |
embA | 4243153 | c.-80C>G | upstream_gene_variant | 0.5 |
embA | 4243462 | p.Ser77Leu | missense_variant | 0.25 |
embA | 4243488 | p.Gly86Ser | missense_variant | 0.25 |
embA | 4243877 | c.645G>T | synonymous_variant | 0.14 |
embA | 4244220 | c.988C>T | synonymous_variant | 1.0 |
embA | 4244428 | p.Ser399* | stop_gained | 0.14 |
embA | 4244487 | p.Ala419Thr | missense_variant | 0.2 |
embA | 4244499 | p.Pro423Thr | missense_variant | 0.2 |
embA | 4244708 | c.1476C>A | synonymous_variant | 0.14 |
embA | 4244724 | p.Asp498Tyr | missense_variant | 0.12 |
embA | 4244831 | p.Phe533Leu | missense_variant | 0.17 |
embA | 4244848 | p.Gly539Val | missense_variant | 0.2 |
embA | 4244899 | p.Thr556Met | missense_variant | 0.14 |
embB | 4245644 | c.-870C>G | upstream_gene_variant | 0.11 |
embA | 4245883 | p.Gly884Val | missense_variant | 0.17 |
embA | 4246131 | p.Leu967Met | missense_variant | 0.13 |
embA | 4246486 | p.Gly1085Asp | missense_variant | 0.17 |
embB | 4246551 | p.Asn13Ser | missense_variant | 1.0 |
embB | 4246864 | c.351C>T | synonymous_variant | 1.0 |
embB | 4247275 | p.Arg254Ser | missense_variant | 0.12 |
embB | 4247569 | c.1056G>T | synonymous_variant | 0.33 |
embB | 4247610 | p.Ser366* | stop_gained | 0.22 |
embB | 4247646 | p.Glu378Ala | missense_variant | 1.0 |
embB | 4247725 | c.1212G>A | synonymous_variant | 0.2 |
embB | 4248591 | p.Ala693Val | missense_variant | 0.5 |
embB | 4249332 | p.Pro940His | missense_variant | 0.22 |
embB | 4249360 | c.2847G>T | synonymous_variant | 0.13 |
embB | 4249461 | p.Pro983Gln | missense_variant | 0.22 |
embB | 4249478 | p.Ala989Ser | missense_variant | 0.15 |
aftB | 4267216 | p.Gly541Arg | missense_variant | 0.17 |
aftB | 4267858 | p.Ile327Val | missense_variant | 1.0 |
aftB | 4268173 | p.Val222Leu | missense_variant | 0.14 |
aftB | 4268792 | c.45G>A | synonymous_variant | 0.17 |
aftB | 4268811 | p.Ser9* | stop_gained | 0.13 |
ubiA | 4269198 | p.Ser212Arg | missense_variant | 0.13 |
ubiA | 4269233 | p.Arg201Ser | missense_variant | 0.14 |
aftB | 4269351 | c.-515C>T | upstream_gene_variant | 1.0 |
aftB | 4269372 | c.-536G>T | upstream_gene_variant | 0.17 |
ubiA | 4269387 | p.Glu149Asp | missense_variant | 1.0 |
aftB | 4269606 | c.-770T>C | upstream_gene_variant | 1.0 |
ubiA | 4269989 | c.-156G>C | upstream_gene_variant | 1.0 |
ethR | 4327572 | p.Gln8His | missense_variant | 0.13 |
ethR | 4327621 | p.Arg25Cys | missense_variant | 0.17 |
ethR | 4327690 | p.Asp48Tyr | missense_variant | 0.17 |
ethR | 4327946 | p.Glu133Ala | missense_variant | 0.11 |
whiB6 | 4338334 | p.Ala63Glu | missense_variant | 0.25 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
gid | 4407588 | c.615A>G | synonymous_variant | 1.0 |
gid | 4408052 | p.Asn51Asp | missense_variant | 1.0 |