EBG00000313325 - n.1320C>T
Drug resistance types
5 Sensitive
1 RR-TB
5 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 16 |
| lineage3;lineage2.2.1 | 1 |
| lineage3 | 1 |
| lineage4 | 2 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.9 | 2 |
| lineage4.1.2.1 | 1 |
| La1.8.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 33 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4799021 | Pre-XDR-TB | lineage2.2.1 | in | ERR386928 | MDR-TB | lineage2.2.1 | None | ERR4798998 | Pre-XDR-TB | lineage3;lineage2.2.1 | in | SRR1062859 | Sensitive | lineage2.2.1 | None | ERR4799785 | HR-TB | lineage3 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR12199411 | Sensitive | lineage4 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR15316243 | Sensitive | lineage2.2.1 | None | SRR15723248 | Sensitive | lineage2.2.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR8692897 | Other | lineage4.9 | None | SRR24035895 | HR-TB | lineage2.2.1 | None | ERR4817933 | Sensitive | lineage4.1.2.1 | gb | ERR2228859 | RR-TB | lineage4 | None | ERR2747617 | Other | La1.8.1 | None | SRR5067396 | HR-TB | lineage2.2.1 | vn | SRR1723537 | HR-TB | lineage2.2.1 | cn | ERR2851371 | Other | lineage4.9 | None | ERR2747685 | Other | La1.8.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4828358 | HR-TB | lineage2.2.1 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6982140 | Other | lineage2.2 | None | SRR6982194 | Other | lineage2.2.1 | None | ERR10748511 | MDR-TB | lineage2.2.1 | None | SRR6981966 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | SRR6982275 | Other | lineage2.2.1 | None |
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