lineage | Count |
---|---|
lineage4 | 24 |
lineage4.1.2.1 | 2 |
lineage4.9 | 8 |
La1.8.1 | 17 |
lineage3.1.2 | 2 |
lineage1.1.2 | 27 |
lineage1.1.2;La1 | 2 |
lineage4.3.2.1 | 1 |
lineage4.9;lineage4.1 | 1 |
2 | |
lineage4.3.4.2.1 | 2 |
lineage4.9.1 | 1 |
lineage4.5;lineage4.4.2 | 1 |
lineage2.2.1 | 1 |
lineage4.8 | 4 |
lineage4;lineage2 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 97 |
ID | Drug resistance | Lineage | Country iso2 | ERR2179603 | Sensitive | lineage4 | cn | ERR4822138 | Other | lineage4.1.2.1 | None | SRR6044830 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR5657364 | Other | La1.8.1 | None | SRR5657441 | Other | La1.8.1 | None | SRR5657442 | Other | La1.8.1 | None | ERR270783 | HR-TB | lineage3.1.2 | None | ERR4798782 | Other | lineage1.1.2 | in | ERR2179819 | Sensitive | lineage4 | cn | ERR2179831 | Sensitive | lineage4 | cn | ERR4810925 | Pre-XDR-TB | lineage4 | cn | ERR4811137 | Other | lineage4 | cn | ERR2179820 | Sensitive | lineage4 | cn | ERR4797919 | Sensitive | lineage1.1.2 | in | ERR2851371 | Other | lineage4.9 | None | ERR4810609 | Sensitive | lineage4 | cn | ERR4811094 | Sensitive | lineage4 | cn | ERR4811067 | Sensitive | lineage4 | cn | ERR2510773 | Sensitive | lineage1.1.2 | it | ERR4811217 | Sensitive | lineage4 | cn | ERR4816156 | Sensitive | lineage1.1.2 | gb | ERR2510758 | Sensitive | lineage1.1.2 | it | ERR4817305 | Sensitive | lineage1.1.2 | gb | ERR4814416 | HR-TB | lineage1.1.2;La1 | gb | SRR6982139 | Sensitive | lineage4.9 | None | ERR4815120 | HR-TB | lineage1.1.2;La1 | gb | SRR7131225 | Sensitive | lineage1.1.2 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR7131090 | Sensitive | lineage1.1.2 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR4819205 | Sensitive | lineage1.1.2 | gb | ERR4821886 | Sensitive | lineage1.1.2 | gb | ERR4553965 | MDR-TB | None | ERR2512584 | Sensitive | lineage1.1.2 | gb | ERR2514149 | Sensitive | lineage1.1.2 | gb | ERR4596910 | Sensitive | lineage4 | None | SRR21732779 | Sensitive | lineage1.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4831481 | Pre-XDR-TB | lineage1.1.2 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | SRR22249523 | HR-TB | lineage1.1.2 | None | SRR22251331 | Sensitive | lineage1.1.2 | None | SRR14296164 | Other | La1.8.1 | None | SRR22251813 | Sensitive | lineage1.1.2 | None | SRR14296162 | Other | La1.8.1 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | SRR22251588 | Sensitive | lineage1.1.2 | None | SRR10500314 | Pre-XDR-TB | lineage1.1.2 | None | SRR14296256 | Other | La1.8.1 | None | SRR14296370 | Other | La1.8.1 | None | SRR14296252 | Other | La1.8.1 | None | SRR14296354 | Other | La1.8.1 | None | SRR14296367 | Other | La1.8.1 | None | SRR14296356 | Other | La1.8.1 | None | SRR21291107 | Sensitive | lineage4 | None | SRR15316356 | Sensitive | lineage4 | None | SRR18548992 | Sensitive | lineage4 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR14296384 | Other | La1.8.1 | None | SRR15316010 | Sensitive | lineage4 | None | SRR15368794 | Sensitive | lineage4.5;lineage4.4.2 | None | SRR16156775 | Other | lineage4.9 | None | SRR18495624 | Other | lineage4 | None | SRR18500608 | Other | lineage4 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR21031705 | Sensitive | lineage4 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR25207188 | Sensitive | lineage4 | None | ERR4814639 | HR-TB | lineage4 | None | SRR6046575 | Sensitive | lineage1.1.2 | gb | SRR5657365 | Other | La1.8.1 | mx | SRR5657490 | Other | La1.8.1 | mx | SRR5657427 | Other | La1.8.1 | mx | SRR5657386 | Other | La1.8.1 | mx | SRR1723960 | Sensitive | lineage4 | cn | SRR5657466 | Other | La1.8.1 | mx | ERR2229358 | Other | lineage4.8 | None | ERR2229033 | Other | lineage4.8 | None | ERR4817060 | RR-TB | None | ERR2228873 | Other | lineage4.8 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR2228859 | RR-TB | lineage4 | None | ERR4817497 | Other | lineage1.1.2 | None | ERR4819112 | Sensitive | lineage1.1.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR3276130 | Sensitive | lineage1.1.2 | nl | ERR4815815 | Sensitive | lineage4 | None | ERR2510649 | MDR-TB | lineage1.1.2 | None | ERR4818148 | Sensitive | lineage1.1.2 | None | ERR4818322 | Other | lineage4.1.2.1 | None | ERR4817653 | Sensitive | lineage1.1.2 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820018 | Sensitive | lineage1.1.2 | None | SRR2100883 | HR-TB | lineage3.1.2 | None |
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