lineage | Count |
---|---|
lineage2.2.1 | 6 |
lineage1.2.2.2 | 2 |
lineage4.3.3 | 2 |
lineage4.9 | 4 |
lineage4.2.2 | 2 |
lineage6.1.1 | 1 |
lineage4.8 | 4 |
La1.7;lineage2.2.1 | 1 |
lineage1.2.2.1 | 1 |
lineage4.1.1.1 | 1 |
lineage4.4.2 | 1 |
lineage4.5 | 1 |
lineage4.1.2.1 | 1 |
lineage4.1.1.3 | 3 |
lineage4.7 | 1 |
La1.2 | 1 |
lineage4.3.2 | 2 |
lineage4.2.1 | 2 |
lineage6.3.2 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage4.3.4.2 | 1 |
lineage1.1.3.2 | 1 |
lineage4.2.2.2 | 1 |
lineage4.9;lineage7 | 2 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4.3.2.1 | 2 |
lineage4.4.1.1 | 1 |
lineage4.1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 48 |
ID | Drug resistance | Lineage | Country iso2 | SRR9971017 | HR-TB | lineage2.2.1 | None | SRR1735599 | Other | lineage1.2.2.2 | None | SRR10851730 | Other | lineage4.3.3 | None | ERR387051 | Other | lineage4.9 | None | ERR3559290 | HR-TB | lineage4.2.2 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | SRR7070596 | Other | lineage4.8 | None | SRR7069954 | Other | lineage1.2.2.2 | None | SRR20969923 | Other | La1.7;lineage2.2.1 | None | ERR2660505 | Other | lineage1.2.2.1 | None | ERR9117725 | Other | lineage4.1.1.1 | None | SRR20969951 | Other | lineage4.4.2 | None | SRR6824324 | Other | lineage4.5 | None | SRR7069216 | Other | lineage4.1.2.1 | None | ERR3559289 | HR-TB | lineage4.2.2 | None | ERR2516042 | Other | lineage4.1.1.3 | za | ERR867520 | Other | lineage4.7 | None | ERR6338273 | Other | La1.2 | None | SRR15316084 | Other | lineage2.2.1 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | ERR9786452 | Other | lineage4.3.2 | None | SRR7069164 | Other | lineage4.8 | None | SRR14781887 | MDR-TB | lineage4.2.1 | None | ERR5336160 | Other | lineage6.3.2 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | ERR3261389 | Other | lineage4.9 | None | ERR7821182 | Other | lineage1.1.3.2 | None | SRR7131201 | Other | lineage4.8 | None | SRR5818591 | Other | lineage4.2.2.2 | dj | DRR189106 | Sensitive | lineage4.3.3 | None | SRR21001883 | XDR-TB | lineage2.2.1 | None | SRR6896535 | Other | lineage4.1.1.3 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR2515818 | Other | lineage4.3.2.1 | za | SRR9971351 | RR-TB | lineage2.2.1 | None | SRR14782113 | Pre-XDR-TB | lineage4.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR21240202 | HR-TB | lineage4.4.1.1 | None | ERR3804166 | Other | lineage4.3.2 | None | SRR7069687 | Other | lineage4.1.1.3.1 | None | SRR11349151 | MDR-TB | lineage2.2.1 | None | ERR3261359 | Other | lineage4.9 | None | SRR6855828 | Other | lineage4.3.2.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR14802219 | Other | lineage4.8 | None | ERR3261351 | Other | lineage4.9 | None |
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