EBG00000313325 - n.838T>G
Drug resistance types
6 Sensitive
5 RR-TB
9 HR-TB
8 MDR-TB
7 Pre-XDR-TB
2 XDR-TB
106 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.7 | 2 |
| lineage4.1.1.3 | 5 |
| lineage2.2.1 | 20 |
| lineage4.4 | 2 |
| lineage4.8 | 19 |
| lineage3 | 14 |
| lineage4.2.2.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.1.2.1 | 12 |
| lineage1.2.2.1 | 2 |
| lineage4.1.1 | 3 |
| lineage4.1.1.2 | 2 |
| lineage3.1.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.9 | 7 |
| lineage4.3.3 | 5 |
| lineage4 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.8;lineage3 | 1 |
| lineage4.5 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.3.4.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.3.4.1 | 1 |
| La1.8.1 | 4 |
| lineage6.3.2 | 1 |
| lineage4.3.2 | 2 |
| lineage1.1.3.2 | 1 |
| La1.2 | 2 |
| lineage4.6 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.2 | 3 |
| lineage4.6.3 | 1 |
| lineage4.2.1 | 1 |
| 2 | |
| lineage2.2.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage1.1.2 | 2 |
| lineage4.8.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.8.1 | 1 |
| lineage4.6.1 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 41 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819921 | Other | lineage4.7 | None | ERR2516042 | Other | lineage4.1.1.3 | za | ERR2514848 | HR-TB | lineage2.2.1 | gb | ERR2514857 | Other | lineage2.2.1 | None | SRR6045465 | Other | lineage4.4 | gb | ERR4820047 | HR-TB | lineage4.8 | gb | ERR2515077 | Sensitive | lineage3 | gb | SRR5818591 | Other | lineage4.2.2.2 | dj | ERR4821105 | Other | lineage3.1.2 | gb | ERR4821109 | Other | lineage4.1.2.1 | None | SRR6046096 | Other | lineage4.1.2.1 | None | ERR2660505 | Other | lineage1.2.2.1 | None | ERR4821280 | Other | lineage4.1.1 | gb | ERR4821906 | Other | lineage4.1.1 | None | ERR4822150 | Other | lineage4.8 | gb | SRR6045614 | Other | lineage4.8 | None | SRR6045135 | Other | lineage3 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818630 | Other | lineage2.2.1 | None | SRR6044787 | Other | lineage4.4 | None | SRR6045797 | Other | lineage4.1.1.2 | gb | SRR5818670 | Other | lineage4.1.2.1 | None | SRR6044774 | Other | lineage3 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045175 | Other | lineage3.1.2.2 | None | SRR6045158 | Other | lineage4.9 | None | SRR6046197 | Other | lineage4.3.3 | None | SRR6046208 | Other | lineage4 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR1735629 | Other | lineage1.2.2.2 | gb | SRR6046219 | Other | lineage4.8;lineage3 | gb | SRR6824324 | Other | lineage4.5 | None | SRR6046860 | Other | lineage4.4.1.1 | None | ERR4829337 | Other | lineage4.8 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR6896535 | Other | lineage4.1.1.3 | None | SRR6855828 | Other | lineage4.3.2.1 | None | SRR7131028 | Other | lineage4.8 | None | ERR2984792 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR8600099 | Other | La1.8.1 | None | SRR7131201 | Other | lineage4.8 | None | SRR9971351 | RR-TB | lineage2.2.1 | None | SRR7131198 | Other | lineage4.3.3 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | SRR9971209 | RR-TB | lineage2.2.1 | None | SRR8600217 | Other | La1.8.1 | None | SRR9971101 | XDR-TB | lineage4.1.2.1 | None | SRR8600222 | Other | La1.8.1 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | SRR9971147 | RR-TB | lineage2.2.1 | None | ERR3261351 | Other | lineage4.9 | None | ERR5336160 | Other | lineage6.3.2 | None | ERR3261389 | Other | lineage4.9 | None | ERR3261359 | Other | lineage4.9 | None | ERR3468585 | Other | La1.8.1 | None | ERR3804166 | Other | lineage4.3.2 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR6197028 | Other | lineage4.9 | None | ERR6338273 | Other | La1.2 | None | ERR6338358 | Other | La1.2 | None | ERR9117690 | Other | lineage4.8 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117695 | Other | lineage4.1.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | ERR9117728 | Other | lineage3 | None | ERR9786452 | Other | lineage4.3.2 | None | ERR9117725 | Other | lineage4.1.1 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR10315610 | RR-TB | lineage4.2.2.2 | None | SRR10315715 | MDR-TB | lineage4.4.1.1.1 | None | SRR10851730 | Other | lineage4.3.3 | None | SRR10851620 | Other | lineage4.1.2 | None | SRR11349151 | MDR-TB | lineage2.2.1 | None | SRR11342679 | Other | lineage4.6.3 | None | SRR14782113 | Pre-XDR-TB | lineage4.2.1 | None | SRR12199455 | Other | None | SRR15316084 | Other | lineage2.2.1 | None | SRR14802219 | Other | lineage4.8 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR15316102 | Other | lineage2.2.1.1 | None | SRR18213675 | Other | lineage4.8 | None | SRR19304109 | Other | lineage4.8 | None | SRR18912998 | Sensitive | lineage3 | None | SRR18213780 | Other | lineage4.1.1.3 | None | SRR20969923 | Other | lineage2.2.1 | None | SRR2101076 | Other | lineage4.3.2.1 | None | SRR20969951 | Other | lineage4.4.2 | None | SRR21001883 | XDR-TB | lineage2.2.1 | None | SRR2101627 | Other | lineage4.1.2.1 | None | SRR21240149 | Sensitive | lineage4.3.3 | None | SRR21239878 | HR-TB | lineage4.4.1.1 | None | SRR22048373 | Sensitive | lineage4.1.2.1 | None | SRR21240202 | HR-TB | lineage4.4.1.1 | None | SRR21798279 | MDR-TB | lineage2.2.1 | None | ERR1665405 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814643 | Other | lineage4.1.2.1 | None | ERR4814512 | Other | lineage2.2.1 | None | ERR1665403 | MDR-TB | lineage2.2.1 | None | SRR3675234 | Other | None | ERR4814714 | Other | lineage3 | None | ERR4815521 | Other | lineage4.8 | gb | ERR4815528 | Other | lineage4.8 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4814901 | Other | lineage2.2.1 | gb | ERR4816181 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4815921 | Other | lineage4.3.3 | gb | ERR4816243 | Sensitive | lineage3 | None | ERR4817357 | HR-TB | lineage3 | gb | ERR4816582 | Other | lineage4.1.1.3 | gb | SRR3675567 | Other | lineage4.8 | gb | ERR4817221 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4816703 | Sensitive | lineage4.5 | None | ERR4816725 | Other | lineage4.8 | gb | ERR4816779 | Other | lineage3 | gb | ERR2513005 | Other | lineage4.6 | gb | ERR4817834 | Other | lineage1.1.2 | gb | ERR2513384 | Other | lineage4.8.2 | gb | ERR4816800 | Other | lineage4.8 | gb | ERR4817866 | HR-TB | lineage3 | gb | ERR4818280 | Other | lineage4.1.2.1 | gb | ERR2513389 | Other | lineage3.1.3 | gb | ERR4818023 | Other | lineage4.1.2 | gb | ERR2510753 | Other | lineage4.8 | it | ERR4820711 | HR-TB | lineage4.1.2 | None | ERR2512693 | Other | lineage1.1.2 | gb | ERR4817551 | Other | lineage4.9 | None | ERR4817618 | Other | lineage4.8.1 | None | ERR4818634 | Other | lineage4.6.1 | None | ERR2512841 | HR-TB | lineage2.2.1 | gb | ERR4819166 | Other | lineage3 | gb | ERR2513850 | Pre-XDR-TB | lineage2.2.1 | gb | ERR4820242 | Other | lineage1.2.2.1 | None | ERR2513738 | Other | lineage1.1.3.1 | None | ERR2513837 | Other | lineage4.1.2.1 | gb | ERR2514345 | Other | lineage4.8 | gb | ERR2514263 | Other | lineage4.1.2.1 | gb | ERR2513929 | Other | lineage4.1.1.2 | None | ERR2513975 | Other | lineage3 | gb | ERR2514533 | Other | lineage4.9 | None | ERR4819661 | Other | lineage3 | gb | ERR2515818 | Other | lineage4.3.2.1 | za | ERR2514652 | Other | lineage4.7 | gb | ERR2514753 | Other | lineage3 | None |
|---|
