EBG00000313325 - n.838T>G


Drug resistance types
5 Sensitive 5 RR-TB 4 HR-TB 8 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 75 Other
lineage Counts
lineage Count
lineage3 7
lineage2.2.1 16
lineage4.8 11
lineage4.1.1.3 4
lineage4.4.1.1 3
lineage4.4.2 1
lineage4.3.3 4
lineage4.1.2.1 9
2
lineage4.5 2
lineage4.1.1.3.1 1
lineage4.8.1 1
lineage4.2.2.2 2
lineage4.9 7
lineage1.1.3.1 1
lineage4.6.1 1
lineage4.1.2 2
lineage1.2.2.1 2
lineage4.1.1.2 1
lineage4.7 1
lineage4.1.1 2
lineage4.4 1
lineage3.1.1 1
lineage3.1.2.2 1
lineage4 1
lineage4.3.4.2 1
lineage4.3.4.1 1
lineage4.3.2.1 2
La1.8.1 4
La1.2 2
lineage4.3.2 2
lineage6.3.2 1
lineage1.1.3.2 1
lineage4.4.1.1.1 2
lineage4.6 1
lineage4.6.3 1
lineage4.2.1 1
lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 104
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18912998 Sensitive lineage3 None
SRR18002961 Other lineage2.2.1 None
SRR18213675 Other lineage4.8 None
SRR18213780 Other lineage4.1.1.3 None
SRR19304109 Other lineage4.8 None
SRR20969923 Other lineage2.2.1 None
SRR21798279 MDR-TB lineage2.2.1 None
SRR21001883 XDR-TB lineage2.2.1 None
SRR21239878 HR-TB lineage4.4.1.1 None
SRR21240202 HR-TB lineage4.4.1.1 None
SRR20969951 Other lineage4.4.2 None
SRR21240149 Sensitive lineage4.3.3 None
ERR4814512 Other lineage2.2.1 None
SRR22048373 Sensitive lineage4.1.2.1 None
ERR1665405 Pre-XDR-TB lineage2.2.1 None
ERR4814643 Other lineage4.1.2.1 None
ERR1665403 MDR-TB lineage2.2.1 None
ERR4815528 Other lineage4.8 None
SRR3675234 Other None
ERR4814714 Other lineage3 None
ERR4816703 Sensitive lineage4.5 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4816181 Pre-XDR-TB lineage4.1.1.3.1 None
ERR4816243 Sensitive lineage3 None
ERR4817618 Other lineage4.8.1 None
SRR5818591 Other lineage4.2.2.2 dj
ERR4817551 Other lineage4.9 None
ERR2513738 Other lineage1.1.3.1 None
ERR4818634 Other lineage4.6.1 None
ERR4820711 HR-TB lineage4.1.2 None
ERR4820242 Other lineage1.2.2.1 None
ERR2513929 Other lineage4.1.1.2 None
ERR2514753 Other lineage3 None
SRR2101627 Other lineage4.1.2.1 None
ERR2514533 Other lineage4.9 None
ERR2514857 Other lineage2.2.1 None
ERR4819921 Other lineage4.7 None
ERR2660505 Other lineage1.2.2.1 None
SRR6046096 Other lineage4.1.2.1 None
ERR4821109 Other lineage4.1.2.1 None
ERR4821906 Other lineage4.1.1 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6045614 Other lineage4.8 None
SRR6044774 Other lineage3 None
SRR5818630 Other lineage2.2.1 None
SRR5818670 Other lineage4.1.2.1 None
SRR6045135 Other lineage3 None
SRR6044787 Other lineage4.4 None
SRR6045158 Other lineage4.9 None
SRR6045138 Other lineage3.1.1 None
SRR6045222 Other lineage4.1.2.1 None
SRR6045175 Other lineage3.1.2.2 None
SRR6046208 Other lineage4 None
ERR4829337 Other lineage4.8 None
SRR6046197 Other lineage4.3.3 None
SRR6824324 Other lineage4.5 None
SRR6046860 Other lineage4.4.1.1 None
SRR6511600 MDR-TB lineage4.3.4.2 None
SRR6896535 Other lineage4.1.1.3 None
SRR7131201 Other lineage4.8 None
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
SRR7131198 Other lineage4.3.3 None
SRR6855828 Other lineage4.3.2.1 None
SRR7131028 Other lineage4.8 None
SRR9971369 MDR-TB lineage4.1.1.3 None
SRR9971351 RR-TB lineage2.2.1 None
SRR8600222 Other La1.8.1 None
SRR8600099 Other La1.8.1 None
SRR8600217 Other La1.8.1 None
SRR9971017 HR-TB lineage2.2.1 None
SRR9971209 RR-TB lineage2.2.1 None
SRR9971101 XDR-TB lineage4.1.2.1 None
SRR9971147 RR-TB lineage2.2.1 None
ERR3261359 Other lineage4.9 None
ERR3261389 Other lineage4.9 None
ERR3261351 Other lineage4.9 None
ERR6338358 Other La1.2 None
ERR3468585 Other La1.8.1 None
ERR3804166 Other lineage4.3.2 None
ERR2515818 Other lineage4.3.2.1 za
ERR5336160 Other lineage6.3.2 None
ERR6197028 Other lineage4.9 None
ERR2516042 Other lineage4.1.1.3 za
ERR6338273 Other La1.2 None
ERR9117695 Other lineage4.1.2.1 None
ERR7821182 Other lineage1.1.3.2 None
ERR9117690 Other lineage4.8 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
ERR9117704 Other lineage4.6 None
ERR9117725 Other lineage4.1.1 None
SRR10315476 MDR-TB lineage4.8 None
SRR10315610 RR-TB lineage4.2.2.2 None
ERR9117728 Other lineage3 None
ERR9786452 Other lineage4.3.2 None
SRR11342679 Other lineage4.6.3 None
SRR10851620 Other lineage4.1.2 None
SRR10851730 Other lineage4.3.3 None
SRR10315715 MDR-TB lineage4.4.1.1.1 None
SRR14782113 Pre-XDR-TB lineage4.2.1 None
SRR12199455 Other None
SRR11349151 MDR-TB lineage2.2.1 None
SRR15316102 Other lineage2.2.1.1 None
SRR14802219 Other lineage4.8 None
SRR15316084 Other lineage2.2.1 None