EBG00000313339 - n.1488C>T


Drug resistance types
44 Sensitive 1 RR-TB 37 HR-TB 11 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 1 Other
lineage Counts
lineage Count
lineage4.1.2.1;lineage4.2.1;lineage4.9 22
lineage4.1.2.1;lineage4.2;lineage4.9 4
lineage4.1.2.1;lineage4.2.1 27
lineage4.4.1.1 1
lineage4.2.1 9
lineage4.1.2.1;lineage4.2 6
lineage2.1 10
lineage4.1.2;lineage4.2.1;lineage4.9 9
lineage4.1;lineage4.2.1;lineage4.9 1
lineage4.9.1 1
lineage4.3.2.1 1
lineage4.2.1;lineage4.9 1
lineage4.9 1
lineage4.1.2;lineage4.2.1 1
lineage4.1.2 1
lineage4.1.2;lineage4.2;lineage4.9 1
lineage4.1.2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 97
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1222721 HR-TB lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1224855 HR-TB lineage4.1.2.1;lineage4.2;lineage4.9 None
SRR1218485 Sensitive lineage4.1.2.1;lineage4.2.1 None
ERR1023421 RR-TB lineage4.4.1.1 None
SRR1218484 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR6832382 HR-TB lineage4.2.1 None
SRR1222872 HR-TB lineage4.1.2.1;lineage4.2 None
ERR775787 Sensitive lineage2.1 th
SRR1215907 HR-TB lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1222245 HR-TB lineage4.1.2.1;lineage4.2.1;lineage4.9 None
ERR270697 HR-TB lineage2.1 None
SRR1214871 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1218217 Sensitive lineage4.1.2;lineage4.2.1;lineage4.9 None
SRR11662627 MDR-TB lineage2.1 None
SRR1223082 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1230595 HR-TB lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR11662296 MDR-TB lineage2.1 None
SRR1220990 Sensitive lineage4.1.2.1;lineage4.2.1 None
SRR1230845 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1221213 HR-TB lineage4.1.2.1;lineage4.2;lineage4.9 None
ERR11044238 Pre-XDR-TB lineage4.2.1 None
SRR1220983 Sensitive lineage4.1;lineage4.2.1;lineage4.9 None
SRR11662669 MDR-TB lineage2.1 None
SRR1218737 HR-TB lineage4.1.2.1;lineage4.2 None
ERR245810 Sensitive lineage4.9.1 None
SRR1231779 Sensitive lineage4.1.2;lineage4.2.1;lineage4.9 None
SRR1214735 HR-TB lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR11662474 MDR-TB lineage2.1 None
SRR1221524 Sensitive lineage4.1.2;lineage4.2.1;lineage4.9 None
SRR1215627 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR28240091 MDR-TB lineage4.2.1 None
SRR1216250 Sensitive lineage4.1.2;lineage4.2.1;lineage4.9 None
SRR1232598 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR11662502 MDR-TB lineage2.1 None
SRR4037619 Sensitive lineage4.3.2.1 None
SRR1230902 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1223039 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1233653 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1228489 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1214860 Sensitive lineage4.2.1;lineage4.9 None
SRR1214070 Sensitive lineage4.1.2;lineage4.2.1;lineage4.9 None
SRR1221335 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1223101 HR-TB lineage4.1.2.1;lineage4.2 None
SRR1218875 HR-TB lineage4.1.2.1;lineage4.2;lineage4.9 None
ERR5865980 MDR-TB lineage4.2.1 None
SRR1214359 Sensitive lineage4.1.2;lineage4.2.1;lineage4.9 None
SRR1222355 Sensitive lineage4.1.2;lineage4.2.1;lineage4.9 None
SRR1221238 Sensitive lineage4.1.2.1;lineage4.2.1 None
SRR1232603 HR-TB lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1221359 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1218199 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1218486 HR-TB lineage4.1.2.1;lineage4.2.1 None
ERR144604 HR-TB lineage4.2.1 ru
SRR1231414 Sensitive lineage4.1.2.1;lineage4.2.1 None
SRR1223171 HR-TB lineage4.1.2.1;lineage4.2 None
SRR1215865 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1214549 Sensitive lineage4.1.2.1;lineage4.2.1 None
SRR1228639 Sensitive lineage4.1.2;lineage4.2.1;lineage4.9 None
SRR1208577 Other lineage4.9 None
SRR11662677 Pre-XDR-TB lineage2.1 None
SRR1233283 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1232755 Sensitive lineage4.1.2.1;lineage4.2;lineage4.9 None
SRR11662162 Pre-XDR-TB lineage2.1 None
SRR1226259 HR-TB lineage4.1.2.1;lineage4.2.1;lineage4.9 None
ERR5865815 MDR-TB lineage4.2.1 None
SRR1222345 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1219259 Sensitive lineage4.1.2;lineage4.2.1;lineage4.9 None
SRR1232411 Sensitive lineage4.1.2;lineage4.2.1 None
SRR1220961 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1223327 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SAMN02585942 Sensitive lineage4.1.2 None
SRR1218222 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1219131 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1222234 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1221263 Sensitive lineage4.1.2.1;lineage4.2 None
SRR1218964 Sensitive lineage4.1.2.1;lineage4.2.1 None
SRR14801698 HR-TB lineage4.2.1 None
SRR1215539 HR-TB lineage4.1.2.1;lineage4.2.1 None
ERR5865816 MDR-TB lineage4.2.1 None
SRR1231689 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1219178 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1226239 HR-TB lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1214558 Sensitive lineage4.1.2;lineage4.2;lineage4.9 None
SRR1232807 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR11662223 MDR-TB lineage2.1 None
SRR1221313 Sensitive lineage4.1.2.1;lineage4.2.1 None
SRR1215725 HR-TB lineage4.1.2.1;lineage4.2 None
SRR1223380 Sensitive lineage4.1.2.1;lineage4.2.1 None
SRR1232675 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
SRR1219270 Sensitive lineage4.1.2.1;lineage4.9 None
SRR1222231 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1221272 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1220107 HR-TB lineage4.1.2.1;lineage4.2.1 None
SRR1232988 Sensitive lineage4.1.2.1;lineage4.2.1 None
SRR1221638 Sensitive lineage4.1.2.1;lineage4.2.1;lineage4.9 None
ERR2516744 MDR-TB lineage4.2.1 gb
SRR1214598 Sensitive lineage4.1.2.1;lineage4.2.1 None