EBG00000313339 - n.2891T>C
Drug resistance types
3 Sensitive
12 RR-TB
4 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.3 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.5 | 1 |
| lineage3 | 3 |
| lineage4.9 | 7 |
| lineage4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.8 | 4 |
| lineage4.4.1.1 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage6 | 1 |
| lineage2.2.1 | 5 |
| lineage1.2.2.2 | 2 |
| lineage1.1.2 | 2 |
| lineage4.1 | 1 |
| 2 | |
| lineage1.1.3.2 | 1 |
| lineage4.3.3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513589 | Other | lineage3.1.3 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4818797 | Other | lineage4.5 | None | ERR4819017 | RR-TB | lineage3 | None | ERR2512850 | Sensitive | lineage4.9 | gb | ERR4818507 | RR-TB | lineage4.1.2.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4821409 | Other | lineage4.8 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821286 | Other | lineage4.8 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR6982315 | Other | lineage4.3.2.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR9117788 | Other | lineage3 | None | ERR10796590 | Other | lineage4.9 | None | SRR19304094 | Other | lineage6 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | ERR4816458 | Other | lineage1.2.2.2 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815502 | Other | lineage4.1 | None | ERR4817060 | RR-TB | None | ERR2446070 | Sensitive | lineage4.8 | None | SRR6207288 | HR-TB | lineage1.1.3.2 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4817526 | Other | lineage4.4.1.1 | gb | ERR2027230 | Other | lineage4.2.2.2 | None | ERR4816397 | Other | lineage1.1.2 | None | SRR4033209 | RR-TB | lineage2.2.1 | za | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816907 | Other | lineage1.1.1 | None | SRR5818386 | Other | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4818988 | Other | lineage1 | None |
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