Rv0001 - c.1302C>T
Drug resistance types
23 Sensitive
0 RR-TB
10 HR-TB
17 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 8 |
| lineage4.1.2.1 | 19 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.6.1.2 | 14 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.1.2.1;lineage6.2.3 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10808920 | Sensitive | lineage4.3.3 | None | SRR21691005 | Sensitive | lineage4.1.2.1 | None | ERR2184587 | Sensitive | lineage4.3.3 | pe | ERR4024942 | Sensitive | lineage4.3.3 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR3275925 | Sensitive | lineage4.1.2.1 | nl | ERR3275821 | Sensitive | lineage4.1.2.1 | nl | ERR3275854 | Sensitive | lineage4.1.2.1 | nl | ERR3275836 | Sensitive | lineage4.1.2.1 | nl | ERR3803992 | Sensitive | lineage4.1.2.1 | None | SRR29231812 | MDR-TB | lineage4.6.1.2 | None | ERR9786546 | HR-TB | lineage4.1.2.1 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR10808638 | Sensitive | lineage4.3.3 | None | ERR6865330 | Sensitive | lineage4.3.3 | None | ERR2679289 | HR-TB | lineage4.1.2.1;lineage6.2.3 | None | ERR9786643 | Sensitive | lineage4.1.2.1 | None | SRR998708 | HR-TB | lineage4.1.2.1 | None | SRR29231796 | MDR-TB | lineage4.6.1.2 | None | ERR4812140 | Sensitive | lineage4.3.3 | None | SRR29231564 | MDR-TB | lineage4.6.1.2 | None | SRR21690713 | Sensitive | lineage4.1.2.1 | None | SRR21690712 | Sensitive | lineage4.1.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR21691132 | Sensitive | lineage4.1.2.1 | None | SRR21576717 | MDR-TB | lineage1.2.1.2 | None | SRR29231006 | MDR-TB | lineage4.6.1.2 | None | SRR998711 | HR-TB | lineage4.1.2.1 | None | ERR3799577 | Sensitive | lineage4.1.2.1 | None | ERR1654699 | MDR-TB | lineage4.6.1.2 | None | ERR9786377 | Sensitive | lineage4.1.2.1 | None | SRR29231312 | MDR-TB | lineage4.6.1.2 | None | SRR21690731 | Sensitive | lineage4.1.2.1 | None | ERR1654702 | MDR-TB | lineage4.6.1.2 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR2707200 | MDR-TB | lineage4.6.1.2 | cd | ERR2707198 | MDR-TB | lineage4.6.1.2 | cd | ERR2707183 | MDR-TB | lineage4.6.1.2 | cd | ERR2707129 | MDR-TB | lineage4.6.1.2 | cd | ERR2707008 | MDR-TB | lineage4.6.1.2 | cd | ERR9786323 | Sensitive | lineage4.1.2.1 | None | ERR1199112 | MDR-TB | lineage4.6.1.2 | cd | ERR1654703 | MDR-TB | lineage4.6.1.2 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3276006 | Sensitive | lineage4.1.2.1 | nl | SRR998710 | HR-TB | lineage4.1.2.1 | None | ERR6866183 | Sensitive | lineage4.3.3 | None | SRR998709 | HR-TB | lineage4.1.2.1;lineage6.3 | None | ERR2184383 | Sensitive | lineage4.3.3 | None |
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