Rv0001 - c.666C>A
Drug resistance types
2 Sensitive
0 RR-TB
3 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 1 |
| lineage3.1.2.1 | 5 |
| La1;lineage4.1.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage1.2.1.2.1 | 1 |
| La1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.9 | 1 |
| La1.2.BCG | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 16 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR5979459 | Other | lineage3.1.2.1 | None | ERR2517513 | Other | lineage3.1.2.1 | nl | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR26111983 | Sensitive | lineage1.2.1.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR3275207 | Other | lineage3.1.2.1 | nl | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR11043744 | Sensitive | lineage3.1.2.1 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR2446495 | Other | lineage3.1.2.1 | nl |
|---|
