lineage | Count |
---|---|
lineage2.2.1 | 44 |
lineage2.2.1.2 | 3 |
lineage4.9 | 27 |
lineage4.3.3 | 3 |
lineage2.2.1.1;lineage2.2.1.2;lineage3 | 1 |
lineage4.4.1.1 | 1 |
lineage3.1.2 | 1 |
lineage5.1.2 | 2 |
lineage4.4.2 | 6 |
lineage3 | 2 |
lineage4.5 | 1 |
lineage2.2.2 | 1 |
lineage4.2.1 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 94 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR11068479 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865441 | Pre-XDR-TB | lineage2.2.1 | None |
SRR24255962 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13284994 | Pre-XDR-TB | lineage2.2.1.2 | None |
ERR11044248 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13423569 | Other | lineage2.2.1 | None |
SRR21700889 | Other | lineage4.9 | None |
SRR21700899 | Other | lineage4.9 | None |
SRR21700955 | Other | lineage4.9 | None |
SRR10344326 | Other | lineage4.9 | None |
SRR21700891 | Other | lineage4.9 | None |
SRR21700949 | Other | lineage4.9 | None |
SRR21700893 | Other | lineage4.9 | None |
ERR9993220 | Pre-XDR-TB | lineage4.9 | None |
SRR21700951 | Other | lineage4.9 | None |
SRR21700902 | Other | lineage4.9 | None |
SRR21700957 | Other | lineage4.9 | None |
SRR28888089 | HR-TB | lineage4.3.3 | None |
ERR11067760 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29093944 | Pre-XDR-TB | lineage2.2.1 | None |
DRR130069 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865678 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865442 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8665580 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4796337 | Pre-XDR-TB | lineage2.2.1 | in |
ERR8665602 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25827356 | Pre-XDR-TB | lineage2.2.1.1;lineage2.2.1.2;lineage3 | None |
ERR4798396 | Pre-XDR-TB | lineage2.2.1 | in |
ERR13194011 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4809099 | HR-TB | lineage4.4.1.1 | gs |
SRR29772388 | Pre-XDR-TB | lineage3.1.2 | None |
SRR29093953 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13276234 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11068339 | Pre-XDR-TB | lineage2.2.1 | None |
SRR7516372 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1002678 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865677 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25515322 | Other | lineage2.2.1 | None |
ERR5865348 | Pre-XDR-TB | lineage2.2.1 | None |
ERR386988 | Other | lineage5.1.2 | None |
SRR1013566 | Pre-XDR-TB | lineage4.4.2 | None |
ERR13262083 | Pre-XDR-TB | lineage3 | None |
ERR8665666 | Pre-XDR-TB | lineage2.2.1 | None |
SRR21700958 | Other | lineage4.9 | None |
SRR21700892 | Other | lineage4.9 | None |
SRR21700956 | Other | lineage4.9 | None |
SRR21700890 | Other | lineage4.9 | None |
SRR21700898 | Other | lineage4.9 | None |
SRR6964503 | Pre-XDR-TB | lineage3 | None |
SRR25207211 | Pre-XDR-TB | lineage4.5 | None |
ERR5865350 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2514506 | Other | lineage5.1.2 | gb |
SRR28888044 | XDR-TB | lineage4.3.3 | None |
SRR28045461 | HR-TB | lineage2.2.1.2 | None |
SRR24828609 | Pre-XDR-TB | lineage2.2.1 | None |
SRR26159060 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None |
ERR13258448 | Pre-XDR-TB | lineage2.2.1 | None |
ERR067623 | Pre-XDR-TB | lineage2.2.1 | ru |
ERR13242793 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865349 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11069059 | Pre-XDR-TB | lineage2.2.1.2 | None |
ERR4799878 | Pre-XDR-TB | lineage2.2.1 | in |
SRR25207253 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865351 | Pre-XDR-TB | lineage2.2.1 | None |
SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None |
SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None |
SRR21700954 | Other | lineage4.9 | None |
SRR21700947 | Other | lineage4.9 | None |
SRR21700948 | Other | lineage4.9 | None |
SRR21700900 | Other | lineage4.9 | None |
SRR21700894 | Other | lineage4.9 | None |
SRR21700952 | Other | lineage4.9 | None |
SRR21700950 | Other | lineage4.9 | None |
SRR21700895 | Other | lineage4.9 | None |
SRR10344324 | Other | lineage4.9 | None |
SRR10344325 | Other | lineage4.9 | None |
SRR21700896 | Other | lineage4.9 | None |
ERR1035289 | Pre-XDR-TB | lineage4.3.3 | br |
SRR21576563 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6257035 | Pre-XDR-TB | lineage2.2.1 | None |
SRR21887732 | Pre-XDR-TB | lineage2.2.1 | None |
ERR234596 | Pre-XDR-TB | lineage2.2.1 | ru |
ERR4796906 | Pre-XDR-TB | lineage2.2.1 | in |
ERR5758438 | Pre-XDR-TB | lineage2.2.2 | None |
SRR18002883 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10380241 | Pre-XDR-TB | lineage4.2.1 | None |
SRR10397249 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4872295 | XDR-TB | lineage2.2.1 | None |
SRR7592347 | Pre-XDR-TB | lineage4.8 | None |
SRR1013565 | Pre-XDR-TB | lineage4.4.2 | None |
SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None |
ERR8665665 | Pre-XDR-TB | lineage2.2.1 | None |
DRR130186 | Pre-XDR-TB | lineage2.2.1 | None |