Rv0005 - p.Glu501Asp
Drug resistance types
0 Sensitive
0 RR-TB
11 HR-TB
0 MDR-TB
203 Pre-XDR-TB
24 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 114 |
| lineage3 | 15 |
| lineage2.2.2 | 32 |
| lineage4.8 | 5 |
| lineage4.4.1.1.1 | 7 |
| lineage2.2.1.1 | 7 |
| lineage4.9 | 1 |
| lineage1.2.2.2;lineage2.2.1 | 2 |
| lineage4.4.2 | 2 |
| lineage4.1.1.3 | 7 |
| lineage4.3.3 | 17 |
| lineage4.1.2.1 | 14 |
| lineage3.1 | 3 |
| lineage4.1.1 | 2 |
| lineage4.3.2 | 3 |
| lineage2.2.1;lineage3 | 2 |
| lineage1.2.2.2 | 3 |
| lineage4.4.1.1 | 2 |
| lineage4.2.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.8.1 | 5 |
| lineage1.1.2 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1.1;lineage2.2.2 | 1 |
| lineage4.3.1 | 1 |
| lineage1.2.2;lineage3.1.2 | 1 |
| lineage2.2.1.1;lineage3 | 1 |
| lineage2.2.2;lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 254 |
Geographic prevalence
Country level data for this variant is available for 79 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28351520 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351486 | Pre-XDR-TB | lineage2.2.1 | None | ERR3335795 | Pre-XDR-TB | lineage3 | pk | ERR4829131 | Pre-XDR-TB | lineage3 | pk | SRR8651589 | Pre-XDR-TB | lineage2.2.1 | cn | SRR10869274 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516359 | Pre-XDR-TB | lineage2.2.1 | be | SRR1048851 | Pre-XDR-TB | lineage2.2.2 | None | SRR7654038 | HR-TB | lineage2.2.1 | None | SRR13180222 | HR-TB | lineage3 | None | SRR18149485 | Other | lineage3 | None | ERR4813950 | Pre-XDR-TB | lineage4.8 | br | SRR9971235 | XDR-TB | lineage4.4.1.1.1 | None | ERR4797951 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797213 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799226 | Pre-XDR-TB | lineage2.2.1 | in | SAMN02360557 | Pre-XDR-TB | lineage2.2.2 | kr | SRR21277174 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR22424930 | Pre-XDR-TB | lineage4.9 | None | ERR8976007 | Pre-XDR-TB | lineage2.2.2 | None | ERR4800504 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796443 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | SRR10040372 | Pre-XDR-TB | lineage4.4.2 | None | ERR234641 | Pre-XDR-TB | lineage2.2.1 | ru | ERR10748391 | Pre-XDR-TB | lineage2.2.2 | None | SRR25827397 | XDR-TB | lineage2.2.1 | None | ERR8025681 | Pre-XDR-TB | lineage2.2.2 | None | SRR16157048 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013551 | Pre-XDR-TB | lineage2.2.2 | None | ERR8025678 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013555 | Pre-XDR-TB | lineage2.2.2 | None | SRR19276644 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR13870425 | Pre-XDR-TB | lineage4.3.3 | None | ERR4796949 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2515335 | Pre-XDR-TB | lineage4.1.2.1 | za | SRR6832020 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869188 | Pre-XDR-TB | lineage4.3.3 | None | ERR2516291 | Pre-XDR-TB | lineage2.2.1 | be | ERR8975663 | XDR-TB | lineage2.2.1.1 | None | ERR4553976 | Pre-XDR-TB | lineage3.1 | None | ERR4812994 | Pre-XDR-TB | lineage4.1.1 | None | SAMN02360555 | Pre-XDR-TB | lineage2.2.2 | kr | ERR4799158 | Pre-XDR-TB | lineage2.2.1 | in | ERR10112876 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10465910 | HR-TB | lineage3 | None | ERR4813181 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002971 | Other | lineage2.2.1 | None | SRR6397372 | Other | lineage2.2.1 | ca | ERR137275 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4796342 | Pre-XDR-TB | lineage4.3.3 | in | ERR4796816 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799361 | Pre-XDR-TB | lineage2.2.1 | in | SRR9971186 | Pre-XDR-TB | lineage4.3.2 | None | ERR4831966 | HR-TB | lineage2.2.1 | vn | ERR2184625 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10869234 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11067644 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971305 | Pre-XDR-TB | lineage2.2.2 | None | SRR3105771 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR137257 | Pre-XDR-TB | lineage2.2.1 | ru | ERR11081597 | Pre-XDR-TB | lineage2.2.1 | None | SRR23862040 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277285 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748140 | XDR-TB | lineage2.2.1 | None | SRR25827886 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR1019143 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992638 | XDR-TB | lineage4.1.1.3 | None | ERR11044128 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748092 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351544 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR28045258 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR28351322 | Pre-XDR-TB | lineage3 | None | SRR28393260 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR28393884 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR28351295 | HR-TB | lineage2.2.1 | None | ERR2510260 | Pre-XDR-TB | lineage3 | pk | ERR4800201 | Pre-XDR-TB | lineage3.1 | in | SRR784917 | Pre-XDR-TB | lineage3 | None | SAMN02403625 | Pre-XDR-TB | lineage4.4.1.1 | sz | ERR4798851 | Pre-XDR-TB | lineage3 | in | ERR8025598 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082095 | Pre-XDR-TB | lineage4.8 | None | ERR4799945 | Pre-XDR-TB | lineage2.2.1 | in | ERR11082004 | Pre-XDR-TB | lineage4.3.3 | None | ERR4797156 | Pre-XDR-TB | lineage2.2.1 | in | SRR1048850 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992831 | XDR-TB | lineage2.2.1 | None | SRR6831851 | Pre-XDR-TB | lineage2.2.1 | None | SRR5709991 | Pre-XDR-TB | lineage2.2.2 | th | SRR17732470 | Other | lineage2.2.1 | None | ERR8976031 | Pre-XDR-TB | lineage2.2.2 | None | ERR4812987 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2517065 | Pre-XDR-TB | lineage4.2.1 | gb | ERR4827584 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831995 | HR-TB | lineage2.2.1 | vn | SRR24114351 | Pre-XDR-TB | lineage3 | None | ERR2653107 | Pre-XDR-TB | lineage4.3.3 | None | SRR22248485 | Other | lineage4.3.2 | None | ERR9806940 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068264 | Pre-XDR-TB | lineage2.2.1 | None | ERR8976028 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987303 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800023 | Pre-XDR-TB | lineage2.2.1 | in | SRR13870429 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4799093 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798841 | Pre-XDR-TB | lineage2.2.1 | None | SRR11033751 | Other | lineage2.2.1 | None | ERR9992830 | XDR-TB | lineage2.2.1 | None | SRR25827325 | XDR-TB | lineage2.2.1;lineage4.9 | None | ERR2020067 | Other | lineage2.2.1 | None | ERR229978 | Pre-XDR-TB | lineage2.2.1 | ru | ERR3639742 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2517034 | Other | lineage3 | gb | ERR4830555 | XDR-TB | lineage4.4.1.1.1 | None | ERR11044096 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796589 | Pre-XDR-TB | lineage2.2.1 | in | ERR4813558 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082818 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR7910995 | Pre-XDR-TB | lineage4.1.1 | pe | ERR11798526 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277362 | Other | lineage2.2.1.1 | None | ERR7911197 | Pre-XDR-TB | lineage4.8.1 | za | ERR11044092 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813412 | Pre-XDR-TB | lineage2.2.1 | pe | ERR2516005 | Pre-XDR-TB | lineage2.2.2 | za | ERR5917979 | Pre-XDR-TB | lineage2.2.2 | za | ERR108420 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4822339 | Pre-XDR-TB | lineage2.2.1 | de | SRR5817477 | Pre-XDR-TB | lineage1.1.2 | None | ERR9992832 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799551 | Pre-XDR-TB | lineage3.1 | None | ERR11083099 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025760 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180998 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR6397370 | HR-TB | lineage2.2.1 | ca | SRR6256967 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044180 | XDR-TB | lineage2.2.1 | None | ERR4813407 | Pre-XDR-TB | lineage2.2.1 | pe | ERR2600598 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR1048854 | Pre-XDR-TB | lineage2.2.2 | None | SRR25628575 | Pre-XDR-TB | lineage4.5 | None | SRR11342675 | Pre-XDR-TB | lineage4.8.1 | None | ERR8975673 | Pre-XDR-TB | lineage2.2.1.1;lineage2.2.2 | None | ERR751548 | Pre-XDR-TB | lineage4.3.3 | pe | SRR1173311 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806955 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830560 | XDR-TB | lineage4.4.1.1.1 | None | SRR25827665 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR5865905 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180331 | Pre-XDR-TB | lineage4.3.1 | None | ERR10748194 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515719 | Pre-XDR-TB | lineage2.2.1 | za | ERR10748196 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975997 | Pre-XDR-TB | lineage2.2.2 | None | SRR17732869 | Other | lineage2.2.1 | None | SRR9971193 | XDR-TB | lineage4.4.1.1.1 | None | ERR8025415 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873494 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515250 | Pre-XDR-TB | lineage2.2.1 | za | SRR16156830 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832444 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992898 | XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | SRR21277690 | Other | lineage4.4.2 | None | ERR3639821 | Pre-XDR-TB | lineage4.3.3 | None | SRR1013556 | Pre-XDR-TB | lineage2.2.2 | None | SRR5710015 | Pre-XDR-TB | lineage2.2.2 | th | ERR9993068 | XDR-TB | lineage2.2.1 | None | SRR10808879 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR22175215 | XDR-TB | lineage2.2.1 | None | ERR11488748 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4799169 | Pre-XDR-TB | lineage4.8 | in | ERR2516256 | Pre-XDR-TB | lineage2.2.1 | be | SRR9971278 | Pre-XDR-TB | lineage4.8 | None | ERR2510714 | Pre-XDR-TB | lineage2.2.1 | it | SRR5709780 | Pre-XDR-TB | lineage2.2.2 | th | SRR28393782 | Pre-XDR-TB | lineage4.3.3 | None | SRR28046133 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11773712 | HR-TB | lineage4.8 | None | SRR28393743 | Other | lineage4.1.2.1 | None | ERR12796616 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773830 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510568 | Pre-XDR-TB | lineage3 | pk | SRR5341320 | Other | lineage3 | in | ERR8975996 | Pre-XDR-TB | lineage2.2.2 | None | SRR9971044 | XDR-TB | lineage4.4.1.1.1 | None | SRR5341438 | Other | lineage3 | None | ERR4831597 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975763 | Pre-XDR-TB | lineage4.3.3 | None | ERR4800471 | Pre-XDR-TB | lineage2.2.1 | in | SRR22175197 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813182 | Pre-XDR-TB | lineage2.2.1 | pe | ERR2099781 | Pre-XDR-TB | lineage4.1.2.1 | es | SRR11972358 | Other | lineage1.2.2;lineage3.1.2 | None | SRR10868981 | Pre-XDR-TB | lineage2.2.1 | None | SRR6397475 | Other | lineage2.2.1 | ca | ERR7911373 | Pre-XDR-TB | lineage2.2.1 | pe | ERR8975163 | Pre-XDR-TB | lineage2.2.2 | None | ERR4796599 | Pre-XDR-TB | lineage2.2.1 | in | SRR10315626 | Pre-XDR-TB | lineage2.2.2 | None | ERR4798622 | Pre-XDR-TB | lineage2.2.1 | in | ERR8025448 | Pre-XDR-TB | lineage2.2.2 | None | ERR11044161 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR4813402 | Pre-XDR-TB | lineage2.2.1 | pe | ERR7911196 | Pre-XDR-TB | lineage4.8.1 | za | SRR5338516 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813100 | Pre-XDR-TB | lineage2.2.1 | pe | ERR2099783 | Pre-XDR-TB | lineage4.1.2.1 | es | ERR11049812 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112852 | Pre-XDR-TB | lineage2.2.2 | None | ERR4797635 | Pre-XDR-TB | lineage2.2.1 | in | ERR3287363 | Pre-XDR-TB | lineage4.3.3 | pe | SRR13232626 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043958 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152947 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013552 | Pre-XDR-TB | lineage2.2.2 | None | SRR6257057 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971042 | XDR-TB | lineage4.4.1.1.1 | None | ERR9993037 | XDR-TB | lineage4.1.1.3 | None | SRR26112776 | Pre-XDR-TB | lineage2.2.1 | None | ERR8976114 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25515127 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180221 | HR-TB | lineage3 | None | ERR8975000 | XDR-TB | lineage4.4.1.1.1 | None | ERR10748156 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831774 | Pre-XDR-TB | lineage2.2.1 | None | ERR2099782 | Pre-XDR-TB | lineage4.1.2.1 | es | ERR4813604 | Pre-XDR-TB | lineage4.3.3 | None | SRR25827850 | XDR-TB | lineage2.2.1.1;lineage3 | None | ERR4828626 | HR-TB | lineage2.2.1 | None | ERR3287853 | Pre-XDR-TB | lineage4.3.2 | pe | SRR11349134 | Pre-XDR-TB | lineage4.8.1 | None | ERR12118056 | Pre-XDR-TB | lineage4.3.3 | None | SRR5065581 | HR-TB | lineage2.2.1 | vn | ERR10748148 | XDR-TB | lineage2.2.1 | None | SRR5709988 | Pre-XDR-TB | lineage2.2.2 | th | ERR2516559 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR5918012 | XDR-TB | lineage2.2.1 | za | SRR13232573 | Pre-XDR-TB | lineage4.3.3 | None | ERR5758377 | Pre-XDR-TB | lineage2.2.2 | None | SRR13180218 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152952 | Pre-XDR-TB | lineage2.2.1 | None | ERR11138626 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975687 | XDR-TB | lineage2.2.2;lineage4.3.2.1 | None | ERR4830977 | Pre-XDR-TB | lineage2.2.1 | np | ERR11044156 | Pre-XDR-TB | lineage2.2.1 | None | SRR16157047 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085312 | Pre-XDR-TB | lineage1.1.2 | None | ERR4799024 | Pre-XDR-TB | lineage4.3.3 | in | SRR28351469 | Pre-XDR-TB | lineage4.3.3 | None | SRR28351272 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044399 | XDR-TB | lineage4.3.3 | None | SRR28351454 | Pre-XDR-TB | lineage1.2.2.2 | None |
|---|
