lineage | Count |
---|---|
lineage3 | 387 |
6 | |
lineage2.2.1.1;lineage3 | 2 |
lineage6.3.1 | 10 |
lineage3;lineage4.1.2.1 | 1 |
lineage1.1.2;lineage3 | 1 |
lineage3.1.2 | 1 |
lineage1.1.3;lineage3 | 1 |
lineage3;lineage4.3.4.2 | 1 |
lineage2.2.1;lineage3 | 1 |
lineage1.1.3.1;lineage3 | 1 |
spoligotype | Count |
---|---|
None | 412 |
ID | Drug resistance | Lineage | Country iso2 | ERR12544142 | Sensitive | lineage3 | None | ERR4553847 | MDR-TB | None | SRR3105759 | Pre-XDR-TB | lineage3 | None | ERR10465917 | Sensitive | lineage3 | None | SRR21676525 | Other | lineage3 | None | ERR4798267 | Sensitive | lineage3 | in | ERR3275679 | Sensitive | lineage3 | nl | ERR4818843 | Sensitive | lineage3 | None | ERR4799501 | Sensitive | lineage3 | in | SRR29289406 | Pre-XDR-TB | lineage3 | None | SRR786188 | Sensitive | lineage3 | None | ERR10465879 | Sensitive | lineage3 | None | SRR29017215 | MDR-TB | lineage3 | None | ERR2510356 | HR-TB | lineage3 | pk | SRR28351546 | Sensitive | lineage3 | None | SRR28045696 | Other | lineage3 | None | SRR2100943 | Sensitive | lineage3 | None | SRR19325564 | Other | lineage3 | None | DRR188890 | Sensitive | lineage3 | None | SRR25827810 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | SRR7069360 | Sensitive | lineage3 | None | SRR3675489 | Sensitive | lineage3 | gb | ERR4819232 | Sensitive | lineage3 | gb | ERR4799112 | Sensitive | lineage3 | in | SRR5341290 | Sensitive | lineage3 | in | SRR21722114 | Other | lineage3 | None | ERR4799494 | Sensitive | lineage3 | in | SRR7585411 | MDR-TB | lineage3 | in | ERR3276228 | Sensitive | lineage3 | nl | SRR21733047 | HR-TB | lineage3 | None | SRR29440979 | Sensitive | lineage3 | None | ERR4814673 | HR-TB | lineage3 | None | ERR228123 | Sensitive | lineage3 | None | ERR5979466 | Sensitive | lineage3 | None | ERR2512680 | Sensitive | lineage3 | gb | ERR2513506 | Sensitive | lineage3 | gb | SRR22251421 | Sensitive | lineage3 | None | ERR266547 | Sensitive | lineage3 | None | SRR5341219 | Sensitive | lineage3 | None | ERR4798042 | Sensitive | lineage3 | in | SRR26112524 | Sensitive | lineage3 | None | SRR22249768 | HR-TB | lineage3 | None | SRR7070629 | Sensitive | lineage3 | None | SRR25827336 | Sensitive | lineage3 | None | SRR25827322 | Sensitive | lineage3 | None | SRR6650225 | Sensitive | lineage3 | None | SRR5341220 | Sensitive | lineage3 | in | ERR403353 | Sensitive | lineage3 | None | ERR3806647 | Other | lineage6.3.1 | None | ERR2514843 | Sensitive | lineage3 | gb | SRR25827549 | Pre-XDR-TB | lineage3 | None | ERR11050159 | Other | lineage3 | None | SRR28044607 | Sensitive | lineage3 | None | SRR28409318 | Other | lineage3 | None | SRR28044614 | Sensitive | lineage3 | None | SRR28409650 | Sensitive | lineage3 | None | SRR28044936 | XDR-TB | lineage3 | None | SRR28045937 | Pre-XDR-TB | lineage3 | None | SRR28046079 | Sensitive | lineage3 | None | ERR5897115 | Pre-XDR-TB | lineage3 | None | SRR7070252 | Sensitive | lineage3 | None | ERR3806645 | Sensitive | lineage6.3.1 | None | ERR4796878 | MDR-TB | lineage3 | in | ERR4800389 | Sensitive | lineage3 | None | ERR4799248 | Other | lineage3 | in | SRR22249695 | Sensitive | lineage3 | None | SRR28044922 | XDR-TB | lineage3 | None | ERR1035161 | HR-TB | lineage3 | sa | ERR117725 | Pre-XDR-TB | lineage3 | None | SRR16370339 | Sensitive | lineage3 | None | ERR11050501 | Sensitive | lineage3 | None | SRR28026763 | Sensitive | lineage3 | None | SRR28044891 | Sensitive | lineage3 | None | SRR29231122 | Sensitive | lineage3 | None | ERR13260054 | MDR-TB | lineage3 | None | ERR13265091 | Sensitive | lineage3 | None | SRR28044986 | HR-TB | lineage3 | None | ERR11067707 | Sensitive | lineage3 | None | SRR28045794 | Sensitive | lineage3 | None | SRR24799286 | Sensitive | lineage3 | None | ERR2512730 | Pre-XDR-TB | lineage3 | gb | SRR28044624 | Other | lineage3 | None | SRR28045030 | MDR-TB | lineage3 | None | SRR28046236 | Sensitive | lineage3 | None | SRR22249720 | HR-TB | lineage3 | None | SRR22249798 | Sensitive | lineage3 | None | SRR25827814 | Sensitive | lineage3 | None | SRR29017390 | MDR-TB | lineage3 | None | SRR29096122 | Sensitive | lineage3 | None | SRR3105753 | MDR-TB | lineage3 | None | SRR1173572 | MDR-TB | lineage3 | None | SRR12882727 | Other | lineage3 | None | SRR22249773 | Sensitive | lineage3 | None | SRR6797782 | Sensitive | lineage3 | None | ERR552861 | Sensitive | lineage3 | de | SRR22249651 | Sensitive | lineage3 | None | SRR29231236 | Sensitive | lineage3 | None | SRR21690658 | Sensitive | lineage3 | None | SRR7069443 | Sensitive | lineage3 | None | SRR28044932 | XDR-TB | lineage3 | None | ERR2510629 | MDR-TB | lineage3 | pk | ERR4800055 | Other | lineage3 | in | ERR2513958 | Sensitive | lineage3 | gb | ERR4821283 | Other | lineage3;lineage4.1.2.1 | gb | SRR5341378 | Other | lineage3 | in | SRR15465765 | Sensitive | lineage3 | None | ERR688022 | Pre-XDR-TB | lineage3 | None | ERR4796640 | Sensitive | lineage3 | in | SRR30182327 | Sensitive | lineage3 | None | SRR6797393 | MDR-TB | lineage3 | None | ERR4821971 | Sensitive | lineage3 | gb | ERR3276056 | Sensitive | lineage3 | nl | SRR2100376 | Pre-XDR-TB | lineage3 | None | ERR8976121 | Sensitive | lineage3 | None | ERR4817383 | Sensitive | lineage3 | None | SRR25827343 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | ERR4797721 | Sensitive | lineage3 | in | ERR4798102 | Pre-XDR-TB | lineage3 | in | ERR4831079 | Sensitive | lineage3 | np | ERR2517023 | Pre-XDR-TB | lineage3 | gb | ERR13261965 | Other | lineage3 | None | ERR4799520 | Sensitive | lineage3 | in | SRR25827628 | XDR-TB | lineage3 | None | ERR11068196 | Sensitive | lineage3 | None | ERR4821025 | Sensitive | lineage3 | gb | SRR26112610 | Sensitive | lineage3 | None | ERR4815392 | Sensitive | lineage3 | gb | SRR28046026 | Other | lineage3 | None | ERR4796856 | Sensitive | lineage3 | in | ERR2512599 | Other | lineage3 | gb | ERR4819662 | Other | lineage3 | gb | SRR2101246 | Sensitive | lineage3 | None | SRR6045288 | Other | lineage3 | gb | SRR6153064 | Sensitive | lineage3 | ca | SRR6153253 | HR-TB | lineage3 | ca | SRR6650219 | Sensitive | lineage3 | None | ERR9125437 | MDR-TB | lineage3 | None | ERR4797246 | Pre-XDR-TB | lineage3 | in | SRR5341399 | MDR-TB | lineage3 | in | ERR11049802 | Sensitive | lineage3 | None | SRR6044856 | MDR-TB | lineage3 | gb | SRR29772694 | MDR-TB | lineage3 | None | SRR6797468 | Sensitive | lineage3 | None | ERR4553476 | MDR-TB | None | SRR7070614 | Sensitive | lineage3 | None | SRR18213668 | Sensitive | lineage3 | None | ERR4796401 | Sensitive | lineage3 | in | ERR13289575 | Sensitive | lineage3 | None | ERR9787159 | Sensitive | lineage6.3.1 | None | SRR30182296 | Sensitive | lineage3 | None | ERR046883 | Sensitive | lineage3 | gb | SRR28044434 | MDR-TB | lineage3 | None | SRR21732760 | Other | lineage3 | None | SRR21733328 | Sensitive | lineage3 | None | SRR2100028 | Sensitive | lineage3 | None | SRR21732464 | Sensitive | lineage3 | None | SRR3103071 | Pre-XDR-TB | lineage1.1.2;lineage3 | None | SRR28351549 | Sensitive | lineage3 | None | ERR11080974 | Sensitive | lineage3 | None | SRR21676426 | Other | lineage3 | None | SRR7068885 | Other | lineage3 | None | SRR16058224 | MDR-TB | lineage3 | None | ERR278557 | Sensitive | lineage3 | None | ERR688045 | Pre-XDR-TB | lineage3 | None | ERR2514188 | HR-TB | lineage3 | None | SRR5341225 | Sensitive | lineage3 | in | ERR12544203 | Sensitive | lineage3 | None | ERR9117773 | Sensitive | lineage3 | None | SRR28858466 | Pre-XDR-TB | lineage3 | None | SRR30182734 | Sensitive | lineage3 | None | SRR29289247 | XDR-TB | lineage3 | None | ERR4800223 | Other | lineage3 | in | ERR2517110 | MDR-TB | lineage3 | gb | SRR7070303 | Sensitive | lineage3 | None | SRR28045668 | Other | lineage3 | None | SRR28351493 | Other | lineage3 | None | SRR28045699 | Sensitive | lineage3 | None | SRR28044517 | Sensitive | lineage3 | None | ERR13266544 | MDR-TB | lineage3 | None | ERR4553445 | MDR-TB | None | SRR28044870 | Other | lineage3 | None | ERR551932 | Sensitive | lineage6.3.1 | de | SRR28026760 | Sensitive | lineage3 | None | ERR2510401 | MDR-TB | lineage3 | pk | ERR2510504 | XDR-TB | lineage3 | pk | ERR2510594 | Pre-XDR-TB | lineage3 | pk | ERR13289559 | MDR-TB | lineage3 | None | SRR30182522 | Sensitive | lineage3 | None | SRR30182876 | Sensitive | lineage3 | None | SRR30182899 | Sensitive | lineage3 | None | SRR30182854 | Sensitive | lineage3 | None | SRR30182517 | Sensitive | lineage3 | None | ERR1034613 | Pre-XDR-TB | lineage3 | pk | ERR4799331 | Other | lineage3 | None | SRR6045523 | MDR-TB | lineage3 | gb | SRR5341381 | Sensitive | lineage3 | None | SRR28046341 | Sensitive | lineage3 | None | ERR13289662 | Other | lineage3 | None | ERR2510250 | Pre-XDR-TB | lineage3 | pk | SRR6046223 | Sensitive | lineage3 | gb | ERR2512472 | Sensitive | lineage3 | gb | SRR7517691 | Pre-XDR-TB | lineage3 | None | ERR4553646 | MDR-TB | None | ERR2513490 | Sensitive | lineage3 | gb | ERR2514971 | Sensitive | lineage3 | gb | SRR27450020 | Sensitive | lineage3 | None | SRR28044623 | Sensitive | lineage3 | None | SRR28044991 | Other | lineage3 | None | ERR4797270 | Sensitive | lineage3 | in | ERR4553865 | MDR-TB | None | SRR29126616 | Sensitive | lineage3 | None | ERR11068037 | Sensitive | lineage3 | None | SRR22251979 | Sensitive | lineage3 | None | ERR13292282 | Sensitive | lineage3 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | SRR22424737 | MDR-TB | lineage3 | None | SRR16058109 | Other | lineage3 | None | SRR30182394 | Sensitive | lineage3 | None | ERR4800122 | HR-TB | lineage3 | None | ERR4831058 | Sensitive | lineage3 | np | SRR22249435 | Sensitive | lineage3 | None | SRR28044667 | Sensitive | lineage3 | None | SRR6785358 | Sensitive | lineage3 | None | ERR4817781 | Sensitive | lineage3 | gb | SRR2100309 | Sensitive | lineage3 | None | SRR29052670 | Sensitive | lineage3 | None | ERR9787328 | Sensitive | lineage6.3.1 | None | ERR114460 | Sensitive | lineage3 | None | ERR4817472 | HR-TB | lineage3 | gb | SRR22251868 | Sensitive | lineage3 | None | SAMN02628506 | MDR-TB | lineage3 | ir | ERR13249901 | Sensitive | lineage3 | None | ERR2516814 | MDR-TB | lineage3 | gb | ERR386916 | Sensitive | lineage3 | None | ERR4797761 | Sensitive | lineage3 | in | SRR22251254 | HR-TB | lineage3 | None | ERR2514417 | Sensitive | lineage3 | gb | ERR4815487 | Sensitive | lineage3 | gb | SRR6797716 | Sensitive | lineage3 | None | SRR21676515 | Sensitive | lineage6.3.1 | None | SRR7070361 | Sensitive | lineage3 | None | SRR2100764 | Sensitive | lineage3 | None | SRR22251885 | HR-TB | lineage3 | None | SRR7069077 | Sensitive | lineage3 | None | SRR28044694 | Sensitive | lineage3 | None | SRR7070663 | Sensitive | lineage3 | None | ERR13291686 | Sensitive | lineage3 | None | SRR7069675 | Other | lineage3 | None | ERR13262087 | Sensitive | lineage3 | None | SRR2100240 | HR-TB | lineage3 | None | ERR2513988 | Sensitive | lineage3 | gb | ERR351909 | Sensitive | lineage3 | None | SRR26111985 | Sensitive | lineage3 | None | SRR28045798 | Sensitive | lineage3 | None | ERR3275834 | Sensitive | lineage3 | nl | ERR2512701 | Sensitive | lineage3 | gb | ERR11049934 | Sensitive | lineage3 | None | ERR2512887 | Sensitive | lineage3 | gb | SRR21733131 | Sensitive | lineage3 | None | ERR4800357 | Other | lineage3 | None | ERR4800401 | Sensitive | lineage3 | in | ERR12268450 | Other | lineage3 | None | ERR11050765 | Sensitive | lineage6.3.1 | None | ERR13267136 | Other | lineage3.1.2 | None | ERR2516750 | Pre-XDR-TB | lineage3 | gb | ERR3335773 | MDR-TB | lineage3 | pk | ERR5897106 | Pre-XDR-TB | lineage3 | None | SRR22251775 | Sensitive | lineage3 | None | ERR4797793 | HR-TB | lineage3 | in | ERR4796942 | Other | lineage3 | in | ERR387030 | Sensitive | lineage3 | None | SRR7070448 | Sensitive | lineage3 | None | SRR30182346 | Sensitive | lineage3 | None | SRR2100486 | Sensitive | lineage3 | None | ERR4814582 | HR-TB | lineage3 | None | SRR21657203 | Other | lineage3 | None | ERR4819441 | HR-TB | lineage3 | gb | SRR6797336 | HR-TB | lineage3 | None | SRR1173751 | MDR-TB | lineage3 | None | ERR11044079 | Sensitive | lineage3 | None | SRR6797793 | Sensitive | lineage3 | None | SRR14088390 | MDR-TB | lineage3 | None | SRR21662746 | Sensitive | lineage3 | None | SRR28044414 | Sensitive | lineage3 | None | SRR21678375 | Other | lineage3 | None | ERR4817718 | Sensitive | lineage3 | gb | ERR270771 | HR-TB | lineage3 | None | ERR9787330 | Other | lineage6.3.1 | None | SRR21728326 | Other | lineage3 | None | ERR4800117 | Pre-XDR-TB | lineage3 | None | ERR11067791 | Sensitive | lineage3 | None | ERR228197 | Sensitive | lineage3 | None | ERR9787032 | Sensitive | lineage6.3.1 | None | ERR4818633 | Other | lineage3 | gb | ERR2503433 | Sensitive | lineage3 | fi | ERR13291871 | Sensitive | lineage3 | None | SRR12420436 | MDR-TB | lineage3 | None | ERR4798893 | HR-TB | lineage3 | in | SRR25827712 | MDR-TB | lineage1.1.3;lineage3 | None | SRR29289192 | Pre-XDR-TB | lineage3 | None | ERR2516971 | Pre-XDR-TB | lineage3 | gb | SRR21690962 | Sensitive | lineage3 | None | ERR13261960 | Sensitive | lineage3;lineage4.3.4.2 | None | SRR29096253 | HR-TB | lineage3 | None | ERR294223 | Pre-XDR-TB | lineage3 | None | ERR4796961 | Pre-XDR-TB | lineage3 | in | ERR9117759 | Other | lineage3 | None | ERR4800456 | Sensitive | lineage3 | in | SRR6964552 | HR-TB | lineage3 | None | ERR4831048 | Sensitive | lineage3 | np | ERR2514958 | Sensitive | lineage3 | gb | SRR22251485 | Sensitive | lineage3 | None | ERR11081541 | Sensitive | lineage3 | None | SRR28045773 | Sensitive | lineage3 | None | SRR25827419 | Pre-XDR-TB | lineage3 | None | ERR4829914 | Sensitive | lineage3 | it | SRR6797527 | Sensitive | lineage3 | None | SRR21732565 | Sensitive | lineage3 | None | ERR2516947 | Pre-XDR-TB | lineage3 | gb | ERR13265718 | Sensitive | lineage3 | None | ERR13265328 | Sensitive | lineage3 | None | ERR4815532 | Other | lineage3 | gb | ERR2517116 | Pre-XDR-TB | lineage3 | gb | SRR21689869 | Sensitive | lineage3 | None | ERR552944 | HR-TB | lineage3 | de | SRR29096124 | Sensitive | lineage3 | None | ERR4553403 | MDR-TB | None | SRR7070362 | MDR-TB | lineage3 | None | SRR30182679 | Sensitive | lineage3 | None | SRR28045387 | Sensitive | lineage3 | None | SRR28044971 | Sensitive | lineage3 | None | ERR2510631 | Pre-XDR-TB | lineage3 | pk | ERR3335786 | Pre-XDR-TB | lineage3 | pk | SRR30182295 | Sensitive | lineage3 | None | SRR5341224 | Sensitive | lineage2.2.1;lineage3 | in | SRR29017087 | MDR-TB | lineage3 | None | ERR117677 | HR-TB | lineage3 | None | ERR4821446 | Sensitive | lineage3 | gb | ERR4831033 | Sensitive | lineage3 | np | SRR18911236 | Sensitive | lineage3 | None | SRR2100554 | Sensitive | lineage3 | None | ERR13265930 | Sensitive | lineage3 | None | SRR26112395 | Other | lineage3 | None | SRR25827726 | Sensitive | lineage3 | None | SRR29052756 | Sensitive | lineage3 | None | ERR045762 | Sensitive | lineage3 | None | SRR29289246 | MDR-TB | lineage3 | None | SRR29289260 | Pre-XDR-TB | lineage3 | None | ERR13290879 | Other | lineage3 | None | ERR13265126 | Sensitive | lineage3 | None | SRR28351344 | RR-TB | lineage3 | None | SRR28044722 | Other | lineage3 | None | SRR29017031 | MDR-TB | lineage3 | None | ERR13266272 | Sensitive | lineage3 | None | ERR4821315 | Sensitive | lineage3 | gb | ERR2510578 | Pre-XDR-TB | lineage3 | pk | SRR28045136 | Sensitive | lineage3 | None | ERR13265519 | Sensitive | lineage3 | None | ERR1034590 | Pre-XDR-TB | lineage3 | pk | SRR14088357 | Sensitive | lineage3 | None | SRR22251197 | Other | lineage3 | None | SRR2101023 | Pre-XDR-TB | lineage3 | None | ERR045761 | Sensitive | lineage3 | None | ERR4798609 | Sensitive | lineage3 | in | ERR4800473 | Pre-XDR-TB | lineage3 | in | ERR9125805 | Other | lineage3 | None | ERR4818877 | Other | lineage3 | gb | SRR28351347 | Other | lineage3 | None | ERR4819062 | Other | lineage3 | gb | SRR2100404 | Sensitive | lineage3 | None | SRR21690761 | Sensitive | lineage3 | None | SRR29441097 | Sensitive | lineage3 | None | ERR294221 | Pre-XDR-TB | lineage3 | None | SRR6046762 | Other | lineage3 | gb | ERR4798224 | MDR-TB | lineage3 | in | ERR386841 | Sensitive | lineage3 | None | SRR27450433 | Sensitive | lineage3 | None | SRR7585414 | Sensitive | lineage3 | in | SRR29230980 | Other | lineage3 | None | SRR7069448 | Sensitive | lineage3 | None | ERR13265640 | Sensitive | lineage3 | None | ERR13265861 | Sensitive | lineage3 | None | ERR2510472 | MDR-TB | lineage3 | pk | SRR14088377 | Pre-XDR-TB | lineage3 | None | ERR4814647 | Sensitive | lineage3 | gb | SRR25827847 | Pre-XDR-TB | lineage3 | None | SRR29017185 | MDR-TB | lineage3 | None | SRR5341331 | Sensitive | lineage3 | in | SRR6797532 | Sensitive | lineage3 | None | DRR473753 | Sensitive | lineage3 | None | SRR18213671 | Sensitive | lineage3 | None | SRR3675336 | Sensitive | lineage3 | gb | ERR13093866 | Sensitive | lineage3 | None | ERR11081892 | Sensitive | lineage3 | None | SRR29231082 | Sensitive | lineage3 | None | ERR13289829 | Sensitive | lineage3 | None | SRR6045915 | Other | lineage3 | gb | ERR2446099 | Sensitive | lineage3 | nl | SRR21732292 | Sensitive | lineage3 | None | ERR4799103 | Sensitive | lineage3 | in | SRR28044871 | Sensitive | lineage3 | None | ERR11044299 | Sensitive | lineage3 | None | ERR11082687 | Sensitive | lineage3 | None | ERR4818255 | HR-TB | lineage3 | None | SRR21728711 | Other | lineage3 | None | ERR3803777 | Sensitive | lineage6.3.1 | None | ERR045760 | Sensitive | lineage3 | None | SRR6797717 | Sensitive | lineage3 | None | SRR15014676 | Pre-XDR-TB | lineage3 | None | SRR29052993 | Other | lineage3 | None | SRR7070241 | Sensitive | lineage3 | None | SRR29096274 | Sensitive | lineage1.1.3.1;lineage3 | None |
---|