Rv0006 - c.1647G>A

Drug resistance types
140 Sensitive 1 RR-TB 20 HR-TB 26 MDR-TB 37 Pre-XDR-TB 0 XDR-TB 27 Other
lineage Counts
lineage Count
lineage3 226
lineage6.3.1 10
lineage3;lineage1.1.2 1
10
lineage4.3.2.1 1
lineage3;lineage2.2.1 1
lineage4.1.2.1;lineage3 1
lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 251
Geographic prevalence
Country level data for this variant is available for 117 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18213668 Sensitive lineage3 None
SRR18213671 Sensitive lineage3 None
SRR2100028 Sensitive lineage3 None
ERR11050765 Sensitive lineage6.3.1 None
SRR18911236 Sensitive lineage3 None
SRR19325564 Sensitive lineage3 None
SRR2100240 HR-TB lineage3 None
SRR2100404 Sensitive lineage3 None
SRR2100309 Sensitive lineage3 None
SRR2100376 Pre-XDR-TB lineage3 None
SRR21657203 Other lineage3 None
SRR2100764 Sensitive lineage3 None
SRR2101246 Sensitive lineage3 None
SRR2100486 Sensitive lineage3 None
SRR2100554 Sensitive lineage3 None
SRR2100943 Sensitive lineage3 None
SRR2101023 Pre-XDR-TB lineage3 None
SRR21662746 Sensitive lineage3 None
SRR21676515 Sensitive lineage6.3.1 None
SRR21728711 Sensitive lineage3 None
SRR21676426 Other lineage3 None
SRR21678375 Other lineage3 None
SRR21722114 Sensitive lineage3 None
SRR21728326 Other lineage3 None
SRR21676525 Other lineage3 None
ERR11067707 Sensitive lineage3 None
SRR22424737 MDR-TB lineage3 None
ERR11068196 Sensitive lineage3 None
ERR11067791 Sensitive lineage3 None
ERR11068037 Sensitive lineage3 None
SRR6797336 HR-TB lineage3 None
ERR11081541 Sensitive lineage3 None
ERR11081892 Sensitive lineage3 None
ERR11080974 Sensitive lineage3 None
ERR11082687 Sensitive lineage3 None
SRR6797717 Sensitive lineage3 None
SRR3103071 Pre-XDR-TB lineage3;lineage1.1.2 None
ERR2446099 Sensitive lineage3 nl
SRR3105764 Pre-XDR-TB lineage3 None
SRR3675489 Sensitive lineage3 gb
SRR3105753 MDR-TB lineage3 None
SRR3105759 Pre-XDR-TB lineage3 None
ERR4814673 HR-TB lineage3 None
SRR3105787 Pre-XDR-TB None
ERR4814647 Sensitive lineage3 gb
ERR4815392 Sensitive lineage3 gb
ERR4814582 HR-TB lineage3 None
ERR4815532 Other lineage3 gb
SAMN02628506 MDR-TB lineage3 ir
ERR4815487 Sensitive lineage3 gb
ERR551932 Sensitive lineage6.3.1 de
ERR4817383 Sensitive lineage3 None
SRR3675336 Sensitive lineage3 gb
ERR3275834 Sensitive lineage3 nl
ERR4817472 HR-TB lineage3 gb
SRR4033524 Sensitive lineage4.3.2.1 None
ERR4819062 Other lineage3 gb
ERR2510504 Pre-XDR-TB lineage3 pk
ERR4817781 Sensitive lineage3 gb
ERR4817718 Sensitive lineage3 gb
ERR228123 Sensitive lineage3 None
ERR2510578 Pre-XDR-TB lineage3 pk
ERR2510594 Pre-XDR-TB lineage3 pk
ERR552944 HR-TB lineage3 de
ERR2510629 MDR-TB lineage3 pk
ERR2510631 Pre-XDR-TB lineage3 pk
ERR228197 Sensitive lineage3 None
ERR2512680 Sensitive lineage3 gb
ERR2512472 Sensitive lineage3 gb
ERR4818843 Sensitive lineage3 None
ERR4818877 Other lineage3 gb
ERR2512599 Other lineage3 gb
ERR2503433 Sensitive lineage3 fi
ERR4818255 HR-TB lineage3 None
ERR4818441 Sensitive None
ERR2512701 Sensitive lineage3 gb
ERR2512730 Pre-XDR-TB lineage3 gb
ERR2510250 Pre-XDR-TB lineage3 pk
ERR4818633 Sensitive lineage3 gb
ERR2512887 Sensitive lineage3 gb
ERR2510401 MDR-TB lineage3 pk
ERR2510472 MDR-TB lineage3 pk
ERR2513490 Sensitive lineage3 gb
ERR2510356 HR-TB lineage3 pk
SRR5341378 Other lineage3 in
ERR2513506 Sensitive lineage3 gb
SRR5341381 Sensitive lineage3 None
ERR2513958 Sensitive lineage3 gb
ERR4819232 Sensitive lineage3 gb
ERR2516947 Pre-XDR-TB lineage3 gb
ERR2513988 Sensitive lineage3 gb
SRR5341399 MDR-TB lineage3 in
ERR2514417 Sensitive lineage3 gb
ERR4819441 HR-TB lineage3 gb
ERR2516971 Pre-XDR-TB lineage3 gb
ERR552861 Sensitive lineage3 de
ERR3276228 Sensitive lineage3 nl
ERR2514188 HR-TB lineage3 None
SRR5341219 Sensitive None
ERR4819662 Sensitive lineage3 gb
SRR5341220 Sensitive lineage3 in
SRR5341224 Sensitive lineage3;lineage2.2.1 in
SRR5341225 Other lineage3 in
ERR2514843 Sensitive lineage3 gb
ERR2517023 Pre-XDR-TB lineage3 gb
SRR5341290 Sensitive lineage3 in
ERR2517074 Pre-XDR-TB lineage3 gb
ERR2516814 MDR-TB lineage3 gb
ERR2516750 Pre-XDR-TB lineage3 gb
ERR2514971 Sensitive lineage3 gb
ERR2514958 Sensitive lineage3 gb
SRR5341331 Sensitive lineage3 in
ERR4821025 Sensitive lineage3 gb
ERR2517116 Pre-XDR-TB lineage3 gb
ERR2517110 MDR-TB lineage3 gb
ERR270771 HR-TB lineage3 None
SRR6045523 MDR-TB lineage3 gb
ERR3276056 Sensitive lineage3 nl
ERR278557 Sensitive lineage3 None
ERR266547 Sensitive lineage3 None
ERR4821971 Sensitive lineage3 gb
ERR4821315 Sensitive lineage3 gb
ERR4821283 Sensitive lineage4.1.2.1;lineage3 gb
SRR6044856 MDR-TB lineage3 gb
ERR3275679 Sensitive lineage3 nl
ERR4821446 Sensitive lineage3 gb
SRR6153064 Sensitive lineage3 ca
SRR6045915 Other lineage3 gb
SRR6045288 Other lineage3 gb
SRR6046762 Other lineage3 gb
SRR6650225 Sensitive lineage3 None
SRR6046223 Sensitive lineage3 gb
ERR4829914 Sensitive lineage3 it
SRR6046587 Sensitive None
SRR6650219 Sensitive lineage3 None
ERR294223 Pre-XDR-TB lineage3 None
SRR6153253 HR-TB lineage3 ca
ERR4831048 Sensitive lineage3 np
ERR294221 Pre-XDR-TB lineage3 None
ERR4831033 Sensitive lineage3 np
ERR4831079 Sensitive lineage3 np
ERR4831058 Sensitive lineage3 np
ERR11049802 Sensitive lineage3 None
SRR6797468 Sensitive lineage3 None
SRR6785358 Sensitive lineage3 None
SRR6797393 MDR-TB lineage3 None
SRR6797532 Sensitive lineage3 None
SRR6797527 Sensitive lineage3 None
SRR6797716 Sensitive lineage3 None
SRR6797686 Sensitive lineage3 None
SRR6797702 HR-TB lineage3 None
SRR7517691 Pre-XDR-TB lineage3 None
SRR786188 Sensitive lineage3 None
SRR6964552 HR-TB lineage3 None
SRR6797782 Sensitive lineage3 None
SRR6797793 Sensitive lineage3 None
SRR7517823 HR-TB None
SRR7585414 Sensitive lineage3 in
SRR7585411 MDR-TB lineage3 in
ERR045760 Sensitive lineage3 None
DRR188890 Sensitive lineage3 None
ERR045761 Sensitive lineage3 None
ERR046883 Sensitive lineage3 gb
ERR045762 Sensitive lineage3 None
ERR1035161 HR-TB lineage3 sa
ERR1034613 Pre-XDR-TB lineage3 pk
ERR1034590 Pre-XDR-TB lineage3 pk
ERR10465879 Sensitive lineage3 None
ERR114460 Sensitive lineage3 None
ERR10465917 Sensitive lineage3 None
ERR11044299 Sensitive lineage3 None
ERR11044079 Sensitive lineage3 None
ERR117725 Pre-XDR-TB lineage3 None
ERR117677 HR-TB lineage3 None
ERR3335786 Pre-XDR-TB lineage3 pk
ERR3335773 MDR-TB lineage3 pk
ERR351909 Sensitive lineage3 None
ERR3803777 Sensitive lineage6.3.1 None
ERR386841 Sensitive lineage3 None
ERR3806645 Sensitive lineage6.3.1 None
ERR3806647 Other lineage6.3.1 None
ERR4553403 RR-TB None
ERR386916 Sensitive lineage3 None
ERR387030 Sensitive lineage3 None
ERR403353 Sensitive lineage3 None
ERR4553476 MDR-TB None
ERR4553646 MDR-TB None
ERR4553445 MDR-TB None
ERR4553865 MDR-TB None
ERR4553847 MDR-TB lineage3 None
ERR4796401 Sensitive lineage3 in
ERR4796856 Sensitive lineage3 in
ERR4796640 Sensitive lineage3 in
ERR4796942 Other lineage3 in
ERR4796878 MDR-TB lineage3 in
ERR4796961 Pre-XDR-TB lineage3 in
ERR4797270 Sensitive lineage3 in
ERR4797246 Pre-XDR-TB lineage3 in
ERR4797721 Sensitive lineage3 in
ERR4797761 Sensitive lineage3 in
ERR4797793 HR-TB lineage3 in
ERR4798042 Sensitive lineage3 in
ERR4798267 Sensitive lineage3 in
ERR4798102 Pre-XDR-TB lineage3 in
ERR4798224 MDR-TB lineage3 in
ERR4798609 Sensitive lineage3 in
ERR4798893 HR-TB lineage3 in
ERR4799103 Sensitive lineage3 in
ERR4799331 Other lineage3 None
ERR4799112 Sensitive lineage3 in
ERR4799248 Other lineage3 in
ERR4799494 Sensitive lineage3 in
ERR4800223 Other lineage3 in
ERR4799520 Sensitive lineage3 in
ERR4800055 Other lineage3 in
ERR4799501 Sensitive lineage3 in
ERR4800117 Pre-XDR-TB lineage3 None
ERR4800122 HR-TB lineage3 None
ERR4800389 Sensitive lineage3 None
ERR4800357 Other lineage3 None
ERR4800401 Sensitive lineage3 in
ERR4800473 Pre-XDR-TB lineage3 in
ERR4800456 Sensitive lineage3 in
ERR5897106 Pre-XDR-TB lineage3 None
ERR5897115 Pre-XDR-TB lineage3 None
ERR11049934 Sensitive lineage3 None
ERR5979466 Sensitive lineage3 None
ERR9117773 Sensitive lineage3 None
ERR688022 Pre-XDR-TB lineage3 None
ERR9117759 Other lineage3 None
ERR688045 Pre-XDR-TB lineage3 None
ERR9125437 MDR-TB lineage3 None
ERR9125805 Other lineage3 None
ERR9787330 Other lineage6.3.1 None
ERR9787159 Sensitive lineage6.3.1 None
ERR9787032 Sensitive lineage6.3.1 None
ERR9787328 Sensitive lineage6.3.1 None
SRR1173572 MDR-TB lineage3 None
ERR11050159 Other lineage3 None
SRR1173311 Pre-XDR-TB lineage2.2.1 None
SRR1173751 MDR-TB lineage3 None
SRR14088357 Sensitive lineage3 None
SRR12882727 Other lineage3 None
ERR11050501 Sensitive lineage3 None
SRR14088390 MDR-TB lineage3 None
SRR14088377 Pre-XDR-TB lineage3 None
SRR16058109 Other lineage3 None
SRR15014676 Pre-XDR-TB lineage3 None
SRR15465765 Sensitive lineage3 None
SRR16370339 Sensitive lineage3 None
SRR16058224 MDR-TB lineage3 None