Rv0006 - c.2319G>A
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
85 Sensitive
5 RR-TB
11 HR-TB
48 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 151 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.1.2.1;lineage4.8 | 4 |
| lineage4.1.1;lineage4.1.2.1 | 2 |
| lineage4.1.2.1;lineage4.3.3 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 160 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6865588 | HR-TB | lineage4.1.2.1 | None | ERR4178227 | Sensitive | lineage4.1.2.1 | None | ERR13267450 | MDR-TB | lineage4.1.2.1 | None | ERR4024824 | MDR-TB | lineage4.1.2.1 | None | ERR4813565 | MDR-TB | lineage4.1.2.1 | None | SRR10808684 | HR-TB | lineage4.1.2.1 | None | ERR6866388 | HR-TB | lineage4.1.2.1 | None | ERR4024784 | Sensitive | lineage4.1.2.1 | None | ERR2184567 | Sensitive | lineage4.1.2.1 | None | SRR16370505 | MDR-TB | lineage4.1.2.1 | None | ERR13261937 | MDR-TB | lineage4.1.2.1 | None | ERR7911351 | MDR-TB | lineage4.1.2.1 | None | ERR6866147 | Sensitive | lineage4.1.2.1 | None | ERR13260329 | MDR-TB | lineage4.1.2.1 | None | ERR13260603 | MDR-TB | lineage4.1.2.1 | None | ERR4812779 | Sensitive | lineage4.1.2.1 | None | SRR16915774 | Sensitive | lineage4.1.2.1 | None | SRR10808430 | Sensitive | lineage4.1.2.1 | None | ERR7911352 | MDR-TB | lineage4.1.2.1 | None | ERR4813034 | RR-TB | lineage4.1.2.1 | pe | ERR751421 | MDR-TB | lineage4.1.2.1 | pe | SRR28393840 | MDR-TB | lineage4.1.2.1 | None | ERR7910855 | MDR-TB | lineage4.1.2.1 | pe | ERR4828961 | MDR-TB | lineage4.1.2.1 | it | ERR751576 | MDR-TB | lineage4.1.2.1 | pe | ERR4829090 | HR-TB | lineage4.1.2.1 | it | ERR4812710 | Sensitive | lineage4.1.2.1 | pe | ERR751490 | Sensitive | lineage4.1.2.1 | pe | ERR775386 | MDR-TB | lineage4.1.2.1 | pe | ERR3132197 | Sensitive | lineage4.1.2.1 | None | ERR2510135 | MDR-TB | lineage4.1.2.1 | pe | SRR13870416 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13260306 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR6866510 | MDR-TB | lineage4.1.2.1 | None | ERR1034702 | Sensitive | lineage4.1.2.1 | pe | ERR7911353 | MDR-TB | lineage4.1.2.1 | None | ERR1034711 | MDR-TB | lineage4.1.2.1 | pe | SRR28393402 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR1213938 | Sensitive | lineage4.1.2.1 | pe | SRR22461592 | MDR-TB | lineage4.1.2.1 | None | ERR6865899 | Sensitive | lineage4.1.2.1 | None | ERR6865992 | Sensitive | lineage4.1.2.1 | None | ERR6865426 | MDR-TB | lineage4.1.2.1 | None | ERR6865698 | Sensitive | lineage4.1.2.1 | None | ERR4812928 | MDR-TB | lineage4.1.2.1 | pe | ERR4025081 | Sensitive | lineage4.1.2.1;lineage4.8 | None | SRR16915732 | MDR-TB | lineage4.1.2.1 | None | ERR4813659 | MDR-TB | lineage4.1.2.1 | None | ERR4178264 | MDR-TB | lineage4.1.2.1 | None | ERR6865775 | Pre-XDR-TB | lineage4.1.1;lineage4.1.2.1 | None | ERR6865421 | Sensitive | lineage4.1.2.1 | None | SRR10808943 | Sensitive | lineage4.1.2.1 | None | ERR13260339 | MDR-TB | lineage4.1.2.1 | None | ERR6866480 | Sensitive | lineage4.1.2.1 | None | ERR4178219 | Pre-XDR-TB | lineage4.1.1;lineage4.1.2.1 | None | ERR4025018 | Sensitive | lineage4.1.2.1 | None | ERR6865773 | Sensitive | lineage4.1.2.1 | None | ERR6865542 | Sensitive | lineage4.1.2.1 | None | ERR13261698 | MDR-TB | lineage4.1.2.1 | None | ERR6866471 | Sensitive | lineage4.1.2.1 | None | ERR6865771 | Sensitive | lineage4.1.2.1;lineage4.3.3 | None | ERR6865912 | MDR-TB | lineage4.1.2.1 | None | ERR6866642 | MDR-TB | lineage4.1.2.1 | None | ERR4025082 | Sensitive | lineage4.1.2.1 | None | ERR13260379 | Other | lineage4.1.2.1 | None | ERR4024791 | Sensitive | lineage4.1.2.1 | None | ERR4024668 | HR-TB | lineage4.1.2.1 | None | SRR16370500 | MDR-TB | lineage4.1.2.1 | None | ERR6865589 | Sensitive | lineage4.1.2.1;lineage4.8 | None | ERR4811700 | Sensitive | lineage4.1.2.1 | pe | ERR4811742 | Sensitive | lineage4.1.2.1 | pe | ERR4812209 | Sensitive | lineage4.1.2.1 | pe | SRR10808375 | Sensitive | lineage4.1.2.1 | None | SRR10808903 | Sensitive | lineage4.1.2.1 | None | ERR4813569 | MDR-TB | lineage4.1.2.1 | None | ERR6866728 | Sensitive | lineage4.1.2.1 | None | ERR2184666 | Sensitive | lineage4.1.2.1 | pe | ERR4813533 | Sensitive | lineage4.1.2.1 | None | ERR3287401 | Sensitive | lineage4.1.2.1 | pe | SRR28409367 | Other | lineage4.1.2.1 | None | ERR4812368 | MDR-TB | lineage4.1.2.1 | pe | ERR3287695 | MDR-TB | lineage4.1.2.1 | pe | ERR3287753 | Other | lineage4.1.2.1 | pe | ERR4812426 | Sensitive | lineage4.1.2.1 | pe | ERR4812530 | Sensitive | lineage4.1.2.1 | pe | ERR4813480 | Sensitive | lineage4.1.2.1 | None | ERR7910856 | MDR-TB | lineage4.1.2.1 | pe | SRR28394290 | MDR-TB | lineage4.1.2.1 | None | ERR4811879 | Sensitive | lineage4.1.2.1 | pe | ERR4811894 | Sensitive | lineage4.1.2.1 | pe | ERR775335 | MDR-TB | lineage4.1.2.1 | pe | ERR4813067 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR775359 | HR-TB | lineage4.1.2.1 | pe | ERR6866823 | MDR-TB | lineage4.1.2.1 | None | SRR19320509 | Sensitive | lineage4.1.2.1 | None | ERR4024622 | Sensitive | lineage4.1.2.1;lineage4.3.3 | None | ERR4024902 | Sensitive | lineage4.1.2.1 | None | ERR6865587 | Sensitive | lineage4.1.2.1 | None | ERR6865898 | Sensitive | lineage4.1.2.1 | None | ERR6866350 | Sensitive | lineage4.1.2.1 | None | SRR10808613 | Sensitive | lineage4.1.2.1 | None | ERR4178165 | Sensitive | lineage4.1.2.1 | None | ERR4178297 | Sensitive | lineage4.1.2.1 | None | SRR10808639 | Sensitive | lineage4.1.2.1 | None | ERR4811695 | HR-TB | lineage4.1.2.1 | pe | ERR13260403 | RR-TB | lineage4.1.2.1 | None | SRR28393802 | MDR-TB | lineage4.1.2.1 | None | SRR28858428 | MDR-TB | lineage4.1.2.1 | None | ERR4178216 | Sensitive | lineage4.1.2.1 | None | SRR10808606 | HR-TB | lineage4.1.2.1 | None | ERR6865826 | RR-TB | lineage4.1.2.1 | None | SRR29126257 | Sensitive | lineage4.1.2.1 | None | ERR13260616 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR6865449 | Sensitive | lineage4.1.2.1 | None | SRR13870427 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR6866083 | Sensitive | lineage4.1.2.1 | None | ERR4178300 | Sensitive | lineage4.1.2.1 | None | ERR4024598 | Sensitive | lineage4.1.2.1 | None | ERR4024864 | RR-TB | lineage4.1.2.1 | None | ERR4024604 | Sensitive | lineage4.1.2.1 | None | ERR4178262 | Sensitive | lineage4.1.2.1 | None | SRR29052728 | Sensitive | lineage4.1.2.1 | None | ERR6866014 | Sensitive | lineage4.1.2.1 | None | ERR4811659 | Sensitive | lineage4.1.2.1 | pe | SRR28393309 | MDR-TB | lineage4.1.2.1 | None | SRR10808833 | Sensitive | lineage4.1.2.1 | None | ERR6866663 | MDR-TB | lineage4.1.2.1 | None | ERR6866087 | Sensitive | lineage4.1.2.1 | None | ERR4024939 | Sensitive | lineage4.1.2.1 | None | ERR2184217 | Sensitive | lineage4.1.2.1 | pe | ERR4813277 | Sensitive | lineage4.1.2.1 | pe | ERR2184341 | HR-TB | lineage4.1.2.1 | None | ERR2184382 | Sensitive | lineage4.1.2.1 | None | ERR2184405 | Sensitive | lineage4.1.2.1 | pe | ERR2184603 | Sensitive | lineage4.1.2.1 | pe | ERR2184267 | Sensitive | lineage4.1.2.1 | pe | ERR3132192 | Sensitive | lineage4.1.2.1 | None | ERR2184411 | HR-TB | lineage4.1.2.1 | pe | ERR6866944 | MDR-TB | lineage4.1.2.1 | None | SRR10808540 | Sensitive | lineage4.1.2.1 | None | ERR3287571 | MDR-TB | lineage4.1.2.1 | None | ERR6866379 | MDR-TB | lineage4.1.2.1 | None | ERR4025124 | Sensitive | lineage4.1.2.1 | None | ERR4812272 | MDR-TB | lineage4.1.2.1 | None | ERR4812380 | Other | lineage4.1.2.1 | pe | ERR4812469 | Sensitive | lineage4.1.2.1 | pe | ERR4812514 | MDR-TB | lineage4.1.2.1 | pe | ERR1465741 | HR-TB | lineage4.1.2.1 | pe | SRR28394152 | Sensitive | lineage4.1.2.1 | None | SRR28393440 | MDR-TB | lineage4.1.2.1 | None | ERR6865830 | Sensitive | lineage4.1.2.1 | None | ERR6866084 | Sensitive | lineage4.1.2.1;lineage4.8 | None | ERR6866193 | Sensitive | lineage4.1.2.1 | None | ERR6865506 | Sensitive | lineage4.1.2.1 | None | ERR6865779 | Sensitive | lineage4.1.2.1 | None | ERR6866761 | Sensitive | lineage4.1.2.1 | None | ERR4025065 | Sensitive | lineage4.1.2.1;lineage4.8 | None | ERR6866996 | Sensitive | lineage4.1.2.1 | None | ERR2184471 | Sensitive | lineage4.1.2.1 | pe | ERR13260420 | RR-TB | lineage4.1.2.1 | None |
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