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SRA data
Rv0006
- c.570G>A
Drug resistance types
2 Sensitive
0 RR-TB
2 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
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lineage
Count
lineage
Count
La1.2
11
La1.7;lineage4.9
2
La3;lineage4.9
2
lineage1.2.2.2
2
lineage1.1.1.1
1
La3;lineage2.1;lineage4.9
1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
20
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR13290766
MDR-TB
lineage1.2.2.2
None
ERR13291034
MDR-TB
lineage1.2.2.2
None
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR6359045
Other
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
None
SRR1165628
Other
La3;lineage4.9
None
SRR1167384
Other
La3;lineage4.9
None
SRR13180270
Other
La1.2
None
SRR13986559
Other
La1.2
None
SRR13986564
Other
La1.2
None
Showing 1 to 10 of 20 entries
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