Rv0006 - p.Ala288Asp
Drug resistance types
8 Sensitive
1 RR-TB
2 HR-TB
101 MDR-TB
61 Pre-XDR-TB
3 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 101 |
| lineage4.3.3 | 4 |
| lineage4.2.1 | 11 |
| lineage3 | 23 |
| lineage4.4.1.1 | 7 |
| lineage4.3.2.1 | 8 |
| lineage4.1.1.3 | 7 |
| lineage2.2.1;lineage4.3.3 | 2 |
| lineage2.2.2 | 8 |
| lineage4.8 | 2 |
| lineage3.1 | 1 |
| lineage2.2.1;lineage4.3.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1;lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.2.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.8.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage1.1.2 | 1 |
| lineage2.1 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 189 |
Geographic prevalence
Country level data for this variant is available for 36 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5865739 | MDR-TB | lineage2.2.1 | None | SRR13232723 | Pre-XDR-TB | lineage4.3.3 | None | ERR5865738 | MDR-TB | lineage2.2.1 | None | SRR10380009 | MDR-TB | lineage4.2.1 | None | SRR13870390 | Pre-XDR-TB | lineage4.3.3 | None | ERR4820562 | Other | lineage3 | gb | SRR18002896 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011059 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070646 | Sensitive | lineage3 | None | ERR7911335 | MDR-TB | lineage2.2.1 | us | SRR22137414 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762439 | MDR-TB | lineage4.2.1 | None | ERR9286003 | MDR-TB | lineage4.4.1.1 | None | SRR15316475 | Other | lineage2.2.1 | None | SRR25827508 | Sensitive | lineage3 | None | SRR15315941 | Pre-XDR-TB | lineage2.2.1 | None | SRR24222952 | MDR-TB | lineage2.2.1 | None | SRR16156270 | MDR-TB | lineage2.2.1 | None | ERR502890 | MDR-TB | lineage2.2.1 | None | ERR4407452 | Other | lineage3 | None | SRR6458420 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307419 | MDR-TB | lineage2.2.1 | None | ERR4827488 | MDR-TB | lineage2.2.1 | None | SRR7341643 | MDR-TB | lineage4.4.1.1 | ro | ERR11252569 | MDR-TB | lineage2.2.1 | None | SRR28045578 | Pre-XDR-TB | lineage2.2.1 | None | SRR8651577 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8651590 | MDR-TB | lineage2.2.1 | cn | ERR4972557 | Pre-XDR-TB | lineage4.3.3 | None | ERR6362056 | MDR-TB | lineage4.3.2.1 | None | ERR9806931 | MDR-TB | lineage4.1.1.3 | None | ERR5864991 | MDR-TB | lineage2.2.1 | None | ERR4831538 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR23310848 | Pre-XDR-TB | lineage4.2.1 | None | ERR4819820 | Other | lineage3 | None | ERR11798712 | Pre-XDR-TB | lineage4.2.1 | None | ERR11488356 | MDR-TB | lineage2.2.1 | None | ERR5758348 | Pre-XDR-TB | lineage2.2.2 | None | SRR24114365 | Sensitive | lineage2.2.1 | None | SRR12420400 | Pre-XDR-TB | lineage2.2.1 | None | SRR16087909 | MDR-TB | lineage2.2.1 | None | ERR4821519 | Other | lineage3 | gb | ERR688026 | MDR-TB | lineage3 | None | ERR4799121 | HR-TB | lineage3 | in | ERR7911626 | MDR-TB | lineage2.2.1 | za | SRR6824595 | Pre-XDR-TB | lineage2.2.1 | cn | SRR12420647 | MDR-TB | lineage2.2.1 | None | ERR7911627 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | za | ERR4815496 | Other | lineage3 | gb | SRR16157051 | MDR-TB | lineage2.2.1 | None | ERR5866402 | MDR-TB | lineage2.2.1 | None | ERR405205 | MDR-TB | lineage4.4.1.1 | None | SRR15368968 | RR-TB | lineage2.2.1 | None | SRR6831933 | Sensitive | lineage4.8 | None | ERR5864988 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287856 | Pre-XDR-TB | lineage2.2.1 | pe | SRR11638839 | XDR-TB | lineage3 | None | ERR5864990 | MDR-TB | lineage2.2.1 | None | ERR405207 | MDR-TB | lineage4.4.1.1 | None | ERR4799504 | Sensitive | lineage3.1 | in | SRR7646030 | MDR-TB | lineage4.2.1 | None | ERR8976032 | Pre-XDR-TB | lineage2.2.2 | None | SRR24256353 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869221 | MDR-TB | lineage2.2.2 | None | ERR5864996 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797916 | Pre-XDR-TB | lineage3 | in | SRR10430396 | MDR-TB | lineage2.2.1;lineage4.3.2.1 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR4800105 | HR-TB | lineage3.1.2.1 | None | ERR1873436 | Pre-XDR-TB | lineage2.2.2 | za | ERR4829505 | Other | lineage3 | it | ERR5864992 | MDR-TB | lineage2.2.1 | None | SRR12420654 | MDR-TB | lineage2.2.1 | None | SRR16156705 | Pre-XDR-TB | lineage2.2.2 | None | ERR4830961 | Pre-XDR-TB | lineage2.2.1 | np | SRR7645999 | MDR-TB | lineage4.2.1 | None | ERR7911634 | Pre-XDR-TB | lineage2.2.1;lineage4.4.1.1 | za | ERR4799769 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156212 | MDR-TB | lineage2.2.1 | None | SRR2024994 | Pre-XDR-TB | lineage2.2.1 | cn | SRR25827775 | MDR-TB | lineage2.2.1;lineage3 | None | SRR16370536 | MDR-TB | lineage2.2.1 | None | SRR28046109 | MDR-TB | lineage3 | None | SRR28044688 | XDR-TB | lineage3 | None | SRR5153234 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276920 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869256 | MDR-TB | lineage2.2.1 | None | ERR3639794 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799883 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR2517041 | MDR-TB | lineage3 | gb | SRR25534434 | Other | lineage4.2.2 | None | ERR1873458 | Pre-XDR-TB | lineage2.2.1 | za | ERR552222 | Pre-XDR-TB | lineage2.2.1 | None | ERR1163047 | MDR-TB | lineage4.8 | None | ERR5866401 | MDR-TB | lineage2.2.1 | None | ERR4800007 | Other | lineage1.2.2.2 | in | SRR16058662 | MDR-TB | lineage2.2.1 | None | SRR14801602 | MDR-TB | lineage4.2.1 | None | SRR10380024 | MDR-TB | lineage4.2.1 | None | SRR5153078 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206892 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5864989 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828013 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755751 | MDR-TB | lineage4.2.1 | None | ERR4827909 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864993 | MDR-TB | lineage2.2.1 | None | ERR4831548 | MDR-TB | lineage2.2.1 | None | ERR5864995 | MDR-TB | lineage2.2.1 | None | ERR9120051 | MDR-TB | lineage4.3.2.1 | None | ERR1768627 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516663 | Pre-XDR-TB | lineage4.1.1.3 | pe | SRR25207308 | MDR-TB | lineage2.2.1 | None | ERR9125486 | MDR-TB | lineage2.2.1 | None | ERR2600563 | MDR-TB | lineage2.2.1 | None | ERR4831594 | MDR-TB | lineage4.3.2.1 | None | ERR2307710 | MDR-TB | lineage2.2.1 | None | SRR16156816 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992713 | XDR-TB | lineage2.2.1 | None | ERR9992861 | MDR-TB | lineage4.8.1 | None | ERR5866400 | MDR-TB | lineage2.2.1 | None | ERR551939 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748522 | MDR-TB | lineage4.1.1.3 | None | SRR6824637 | Pre-XDR-TB | lineage2.2.1 | cn | SRR12420471 | MDR-TB | lineage2.2.1 | None | ERR4822398 | Pre-XDR-TB | lineage2.2.1 | ua | SRR6832428 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156266 | MDR-TB | lineage2.2.1 | None | ERR2307582 | MDR-TB | lineage2.2.1 | None | SRR16156283 | MDR-TB | lineage2.2.1 | None | ERR4011063 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800655 | MDR-TB | lineage3 | None | ERR4011088 | MDR-TB | lineage2.2.1 | None | SRR16156724 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011093 | MDR-TB | lineage2.2.1 | None | ERR4812207 | Other | lineage2.2.1 | pe | ERR2514866 | Other | lineage2.2.1.2 | gb | ERR9285998 | MDR-TB | lineage4.4.1.1 | None | ERR9120052 | MDR-TB | lineage4.3.2.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR5865890 | MDR-TB | lineage2.2.1 | None | ERR9806886 | MDR-TB | lineage2.2.1 | None | SRR16156845 | MDR-TB | lineage2.2.2 | None | ERR8699201 | MDR-TB | lineage4.3.2.1 | None | ERR4896314 | MDR-TB | lineage2.2.1 | None | SRR12420737 | MDR-TB | lineage2.2.1 | None | ERR2307709 | MDR-TB | lineage2.2.1 | None | ERR4011116 | Pre-XDR-TB | lineage2.2.2 | None | ERR4276872 | MDR-TB | lineage2.2.1 | None | SRR7070474 | Sensitive | lineage3 | None | ERR4011927 | MDR-TB | lineage4.3.2.1 | None | SRR28498687 | MDR-TB | lineage4.2.1 | None | SRR28045435 | MDR-TB | lineage2.2.1.1 | None | SRR28393595 | MDR-TB | lineage2.2.1 | None | SRR25515639 | Sensitive | lineage2.2.1 | None | SRR28393392 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR28026765 | Sensitive | lineage3 | None | ERR11252445 | MDR-TB | lineage2.2.1 | None | SRR28046110 | MDR-TB | lineage3 | None | ERR1034594 | MDR-TB | lineage3 | pk | ERR2510465 | MDR-TB | lineage3 | pk | ERR2510699 | Pre-XDR-TB | lineage3 | pk | ERR4831512 | Pre-XDR-TB | lineage3 | pk | SRR10380010 | MDR-TB | lineage4.2.1 | None | SRR6824590 | MDR-TB | lineage2.2.1 | cn | ERR9286005 | MDR-TB | lineage4.4.1.1 | None | SRR1723745 | Pre-XDR-TB | lineage2.2.1 | None | SRR21677936 | Other | lineage4.1.1.3 | None | ERR8975713 | Pre-XDR-TB | lineage2.2.1 | None | ERR8773966 | MDR-TB | lineage2.2.1 | None | SRR25206971 | Pre-XDR-TB | lineage2.2.1 | None | SRR16157049 | MDR-TB | lineage2.2.2 | None | SRR14807477 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156246 | MDR-TB | lineage2.2.1 | None | SRR21732955 | MDR-TB | lineage1.1.2 | None | SRR7070002 | Other | lineage2.2.1.2 | None | ERR4828017 | Pre-XDR-TB | lineage2.2.1 | None | ERR11080930 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR5152896 | MDR-TB | lineage2.2.1 | None | SRR16156782 | MDR-TB | lineage2.2.1 | None | ERR1873545 | MDR-TB | lineage2.2.1 | za | DRR130078 | Pre-XDR-TB | lineage2.1 | None | ERR5987349 | MDR-TB | lineage4.3.2.1 | None | ERR5918037 | Pre-XDR-TB | lineage2.2.1 | za | ERR4809162 | MDR-TB | lineage4.3.2.1 | None | ERR5864994 | MDR-TB | lineage2.2.1 | None | SRR25827576 | MDR-TB | lineage2.2.1 | None | ERR2653079 | MDR-TB | lineage4.3.4.1 | None | ERR7911704 | MDR-TB | lineage4.1.1.3 | za | ERR9285997 | MDR-TB | lineage4.4.1.1 | None |
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