Rv0006 - p.Asp89Asn
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
0 MDR-TB
102 Pre-XDR-TB
11 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 15 |
| lineage2.2.1 | 49 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.4.1 | 10 |
| lineage4.1.2.1 | 2 |
| lineage4.3.4.2 | 3 |
| La1.8.1 | 3 |
| lineage4.8 | 5 |
| lineage4.2.1 | 6 |
| lineage2.2.2 | 18 |
| lineage4.3.3 | 8 |
| lineage4.2.1.1 | 1 |
| lineage4.5 | 3 |
| lineage4.4.2 | 3 |
| lineage4.9 | 2 |
| lineage4.1.1 | 1 |
| lineage4 | 2 |
| lineage4.1.4 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 140 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR2100121 | Other | lineage3 | None |
| SRR2100707 | Other | lineage3 | None |
| SRR3675439 | Other | lineage3 | gb |
| SRR5153082 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR11774875 | Other | lineage4.4.1.1.1 | None |
| ERR2984789 | Pre-XDR-TB | lineage4.3.4.1 | None |
| ERR2510420 | Pre-XDR-TB | lineage4.1.2.1 | None |
| ERR4830827 | Other | lineage3 | et |
| ERR4813122 | Pre-XDR-TB | lineage4.3.4.2 | None |
| ERR019870 | Other | La1.8.1 | None |
| ERR11488964 | XDR-TB | lineage4.3.4.1 | None |
| SRR25827840 | Pre-XDR-TB | lineage4.8 | None |
| ERR5863684 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR7910940 | Pre-XDR-TB | lineage4.2.1 | None |
| SRR29094083 | Pre-XDR-TB | lineage2.2.2 | None |
| ERR13284094 | Pre-XDR-TB | lineage4.3.3 | None |
| ERR230082 | Other | lineage3 | None |
| SRR1181170 | Pre-XDR-TB | lineage4.3.3 | None |
| ERR553133 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR9030461 | Pre-XDR-TB | lineage2.2.2 | None |
| ERR5866125 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR5758329 | Pre-XDR-TB | lineage2.2.2 | None |
| ERR2515250 | Pre-XDR-TB | lineage2.2.1 | za |
| ERR5866126 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR25827634 | Other | lineage3 | None |
| SRR29096833 | Pre-XDR-TB | lineage2.2.2 | None |
| ERR13289307 | Pre-XDR-TB | lineage2.2.2 | None |
| ERR2984790 | Pre-XDR-TB | lineage4.3.4.1 | None |
| ERR13285767 | Pre-XDR-TB | lineage4.2.1 | None |
| ERR13284409 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR6485022 | Pre-XDR-TB | lineage4.2.1.1 | None |
| SRR10303334 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13290804 | Pre-XDR-TB | lineage4.5 | None |
| SRR25515082 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR2984799 | Pre-XDR-TB | lineage4.3.4.1 | None |
| ERR13259984 | XDR-TB | lineage4.4.2 | None |
| ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None |
| ERR13288846 | XDR-TB | lineage2.2.2 | None |
| ERR2510566 | Other | lineage3 | pk |
| ERR3335744 | Pre-XDR-TB | lineage4.5 | pk |
| ERR13260619 | Pre-XDR-TB | lineage4.3.4.2 | None |
| SRR29093514 | Pre-XDR-TB | lineage2.2.2 | None |
| ERR13252922 | Other | lineage4.9 | None |
| SRR24114350 | Pre-XDR-TB | lineage3 | None |
| ERR11775744 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR2024999 | Pre-XDR-TB | lineage2.2.1 | cn |
| ERR775322 | Pre-XDR-TB | lineage4.1.1 | pe |
| ERR11488970 | XDR-TB | lineage4.3.4.1 | None |
| SRR25515426 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR2984796 | Pre-XDR-TB | lineage4.3.4.1 | None |
| SRR28393312 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR21276933 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR403306 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR10430386 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR7646049 | Pre-XDR-TB | lineage4.2.1 | None |
| ERR4813360 | Pre-XDR-TB | lineage4.3.3 | None |
| SRR1169158 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR13423574 | Pre-XDR-TB | lineage4.5 | None |
| ERR026636 | Other | La1.8.1 | None |
| ERR10748143 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR9992781 | XDR-TB | lineage2.2.1 | None |
| SRR25207389 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR1166154 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR25206871 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR5917996 | XDR-TB | lineage2.2.2 | za |
| ERR2984788 | Pre-XDR-TB | lineage4.3.4.1 | None |
| SRR28714178 | XDR-TB | lineage2.2.1 | None |
| SRR10305791 | Other | lineage2.2.1 | None |
| ERR2516297 | Pre-XDR-TB | lineage2.2.1 | be |
| SRR14801607 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13288845 | XDR-TB | lineage2.2.2 | None |
| SAMN02585959 | Pre-XDR-TB | lineage4.3.3 | za |
| ERR13276433 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR28351593 | Pre-XDR-TB | lineage2.2.2 | None |
| SRR6356929 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4809359 | Pre-XDR-TB | lineage2.2.2 | None |
| SRR28859697 | Other | lineage2.2.1 | None |
| ERR5863685 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR072068 | Other | lineage3 | None |
| ERR11082142 | Pre-XDR-TB | lineage4.3.3 | None |
| ERR2984787 | Pre-XDR-TB | lineage4.3.4.1 | None |
| ERR8975518 | Pre-XDR-TB | lineage2.2.2 | None |
| SRR18003043 | Pre-XDR-TB | lineage2.2.2 | None |
| SRR29273786 | Pre-XDR-TB | lineage4.8 | None |
| ERR4810865 | Pre-XDR-TB | lineage2.2.1 | cn |
| ERR11068603 | Other | lineage2.2.1 | None |
| ERR4797008 | Other | lineage4.8 | in |
| SRR4423181 | Pre-XDR-TB | lineage4 | None |
| ERR11081981 | Pre-XDR-TB | lineage2.2.1 | None |
| DRR189069 | Other | lineage4.9 | None |
| SAMN02584619 | Pre-XDR-TB | lineage2.2.1 | md |
| ERR017796 | Other | La1.8.1 | None |
| SRR1181138 | Pre-XDR-TB | lineage4.3.3 | None |
| SRR6964550 | Other | lineage3 | None |
| SRR28351290 | Pre-XDR-TB | lineage2.2.2 | None |
| SRR28351337 | Pre-XDR-TB | lineage3 | None |
| ERR7911666 | Pre-XDR-TB | lineage2.2.2 | za |
| SRR7592355 | Pre-XDR-TB | lineage4.1.4 | None |
| SRR1180293 | Pre-XDR-TB | lineage4.3.3 | None |
| ERR4813405 | Pre-XDR-TB | lineage4.1.2.1.1 | pe |
| ERR5866127 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR2653171 | Pre-XDR-TB | lineage4.3.4.2 | None |
| ERR10762413 | Pre-XDR-TB | lineage4.2.1 | None |
| SRR18715408 | XDR-TB | lineage2.2.1 | None |
| ERR9993105 | XDR-TB | lineage4.1.1.3 | None |
| SRR10380056 | Pre-XDR-TB | lineage4.2.1 | None |
| SRR5341320 | Other | lineage3 | in |
| SRR671862 | Pre-XDR-TB | lineage4.4.2 | cn |
| SRR1180433 | Pre-XDR-TB | lineage4.3.3 | None |
| SRR23861974 | Other | lineage4.8 | None |
| SRR21279384 | Other | lineage4.4.2 | None |
| SRR23938675 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR9738504 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR5917988 | Pre-XDR-TB | lineage4.1.1.3 | za |
| ERR5863734 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR5153256 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4799411 | Other | lineage2.2.1 | in |
| ERR2516665 | Pre-XDR-TB | lineage2.2.1 | pe |
| SRR29096594 | Pre-XDR-TB | lineage2.2.2 | None |
| ERR4553834 | Pre-XDR-TB | lineage4 | None |
| SRR20139558 | Pre-XDR-TB | lineage4.1.4 | None |
| SRR18593215 | Pre-XDR-TB | lineage4.8 | None |
| SRR25827769 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None |
| ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None |
| SRR5067567 | Other | lineage2.2.1 | vn |
| SRR10315613 | Pre-XDR-TB | lineage1.2.2.2 | None |
| ERR13290231 | Other | lineage3 | None |
| ERR2510432 | Pre-XDR-TB | lineage4.1.2.1 | pk |
| SRR29274031 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR2510295 | Pre-XDR-TB | lineage3 | pk |
| SRR29289358 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29289357 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR8025411 | Pre-XDR-TB | lineage2.2.2 | None |
| ERR8975718 | Pre-XDR-TB | lineage2.2.2 | None |
| ERR752132 | Other | lineage2.2.1 | th |
| ERR11773785 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR7910939 | Pre-XDR-TB | lineage4.2.1 | None |
| ERR4811880 | Pre-XDR-TB | lineage4.3.4.1 | pe |
| SRR6824593 | XDR-TB | lineage2.2.1 | cn |
| SRR18213778 | Other | lineage3 | None |
