Rv0006 - p.Asp89Asn
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
0 MDR-TB
93 Pre-XDR-TB
11 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 2 |
| lineage2.2.1 | 45 |
| lineage1.2.2.2 | 1 |
| lineage2.2.2 | 15 |
| lineage4.2.1 | 6 |
| lineage4.3.4.1 | 10 |
| lineage4.3.3 | 8 |
| lineage3 | 14 |
| lineage4.1.2.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.8 | 5 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.5 | 3 |
| lineage4.1.4 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| La1.8.1 | 3 |
| lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.4.2 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 129 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR4423181 | Pre-XDR-TB | lineage4 | None | SRR5067567 | Other | lineage2.2.1 | vn | SRR10315613 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR29093514 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02584619 | Pre-XDR-TB | lineage2.2.1 | md | ERR7910939 | Pre-XDR-TB | lineage4.2.1 | None | ERR4811880 | Pre-XDR-TB | lineage4.3.4.1 | pe | SRR6824593 | XDR-TB | lineage2.2.1 | cn | SRR28859697 | Other | lineage2.2.1 | None | SRR1180293 | Pre-XDR-TB | lineage4.3.3 | None | SRR18213778 | Other | lineage3 | None | ERR4813405 | Pre-XDR-TB | lineage4.1.2.1.1 | pe | SRR21276933 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430386 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762413 | Pre-XDR-TB | lineage4.2.1 | None | SRR18715408 | XDR-TB | lineage2.2.1 | None | ERR9993105 | XDR-TB | lineage4.1.1.3 | None | SRR1169158 | Pre-XDR-TB | lineage2.2.1 | None | SRR6964550 | Other | lineage3 | None | SRR25207389 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917996 | XDR-TB | lineage2.2.2 | za | SRR10305791 | Other | lineage2.2.1 | None | SRR24114350 | Pre-XDR-TB | lineage3 | None | SRR29273786 | Pre-XDR-TB | lineage4.8 | None | SRR23938675 | Pre-XDR-TB | lineage2.2.1 | None | ERR5758329 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02585959 | Pre-XDR-TB | lineage4.3.3 | za | SRR3675439 | Other | lineage3 | gb | SRR5153256 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356929 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515250 | Pre-XDR-TB | lineage2.2.1 | za | ERR4809359 | Pre-XDR-TB | lineage2.2.2 | None | ERR5866126 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975518 | Pre-XDR-TB | lineage2.2.2 | None | SRR25827634 | Other | lineage3 | None | ERR2516665 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4553834 | Pre-XDR-TB | lineage4 | None | ERR2984799 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR4797008 | Other | lineage4.8 | in | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR3335744 | Pre-XDR-TB | lineage4.5 | pk | ERR13288845 | XDR-TB | lineage2.2.2 | None | SRR7592355 | Pre-XDR-TB | lineage4.1.4 | None | SRR5153082 | Pre-XDR-TB | lineage2.2.1 | None | ERR11774875 | Other | lineage4.4.1.1.1 | None | SRR25515426 | Pre-XDR-TB | lineage2.2.1 | None | ERR2984796 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR28393312 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653171 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR2100121 | Other | lineage3 | None | ERR13288846 | XDR-TB | lineage2.2.2 | None | ERR4813122 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR019870 | Other | La1.8.1 | None | ERR13284094 | Pre-XDR-TB | lineage4.3.3 | None | ERR5863684 | Pre-XDR-TB | lineage2.2.1 | None | ERR026636 | Other | La1.8.1 | None | SRR25206871 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285767 | Pre-XDR-TB | lineage4.2.1 | None | DRR189069 | Other | lineage4.9 | None | ERR2984788 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR1181170 | Pre-XDR-TB | lineage4.3.3 | None | SRR2100707 | Other | lineage3 | None | ERR13276433 | Pre-XDR-TB | lineage2.2.1 | None | ERR553133 | Pre-XDR-TB | lineage2.2.1 | None | ERR9030461 | Pre-XDR-TB | lineage2.2.2 | None | ERR2516297 | Pre-XDR-TB | lineage2.2.1 | be | SRR14801607 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866125 | Pre-XDR-TB | lineage2.2.1 | None | SRR9738504 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917988 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR5863734 | Pre-XDR-TB | lineage2.2.1 | None | ERR752132 | Other | lineage2.2.1 | th | ERR13290804 | Pre-XDR-TB | lineage4.5 | None | ERR5863685 | Pre-XDR-TB | lineage2.2.1 | None | ERR072068 | Other | lineage3 | None | ERR2510432 | Pre-XDR-TB | lineage4.1.2.1 | pk | ERR11082142 | Pre-XDR-TB | lineage4.3.3 | None | ERR2984787 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR18003043 | Pre-XDR-TB | lineage2.2.2 | None | SRR6485022 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR20139558 | Pre-XDR-TB | lineage4.1.4 | None | SRR18593215 | Pre-XDR-TB | lineage4.8 | None | SRR25827769 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR11068603 | Other | lineage2.2.1 | None | SRR25515082 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024999 | Pre-XDR-TB | lineage2.2.1 | cn | ERR11081981 | Pre-XDR-TB | lineage2.2.1 | None | ERR017796 | Other | La1.8.1 | None | SRR1181138 | Pre-XDR-TB | lineage4.3.3 | None | ERR8025411 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975718 | Pre-XDR-TB | lineage2.2.2 | None | SRR28351290 | Pre-XDR-TB | lineage2.2.2 | None | ERR11775744 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773785 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351337 | Pre-XDR-TB | lineage3 | None | ERR13289307 | Pre-XDR-TB | lineage2.2.2 | None | ERR7911666 | Pre-XDR-TB | lineage2.2.2 | za | ERR11488970 | XDR-TB | lineage4.3.4.1 | None | ERR2984789 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR5866127 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510295 | Pre-XDR-TB | lineage3 | pk | ERR2510420 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4830827 | Other | lineage3 | et | ERR13259984 | XDR-TB | lineage4.4.2 | None | ERR403306 | Pre-XDR-TB | lineage2.2.1 | None | SRR7646049 | Pre-XDR-TB | lineage4.2.1 | None | ERR4813360 | Pre-XDR-TB | lineage4.3.3 | None | SRR10380056 | Pre-XDR-TB | lineage4.2.1 | None | SRR5341320 | Other | lineage3 | in | SRR13423574 | Pre-XDR-TB | lineage4.5 | None | ERR11488964 | XDR-TB | lineage4.3.4.1 | None | SRR25827840 | Pre-XDR-TB | lineage4.8 | None | ERR7910940 | Pre-XDR-TB | lineage4.2.1 | None | ERR10748143 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992781 | XDR-TB | lineage2.2.1 | None | ERR2510566 | Other | lineage3 | pk | SRR1166154 | Pre-XDR-TB | lineage2.2.1 | None | SRR671862 | Pre-XDR-TB | lineage4.4.2 | cn | ERR230082 | Other | lineage3 | None | SRR1180433 | Pre-XDR-TB | lineage4.3.3 | None | SRR23861974 | Other | lineage4.8 | None | SRR21279384 | Other | lineage4.4.2 | None | SRR28714178 | XDR-TB | lineage2.2.1 | None | SRR28351593 | Pre-XDR-TB | lineage2.2.2 | None | ERR4799411 | Other | lineage2.2.1 | in | ERR2984790 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR10303334 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810865 | Pre-XDR-TB | lineage2.2.1 | cn |
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