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SRA data
Rv0486
- c.1053C>T
Drug resistance types
0 Sensitive
0 RR-TB
2 HR-TB
19 MDR-TB
35 Pre-XDR-TB
1 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
50
lineage3;lineage4.9
3
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
M.canetti;lineage2.1;lineage6.3
1
lineage4.5;lineage4.9
1
La1.7;M.canetti;lineage4.9
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
lineage2.2.1;lineage4.9
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
59
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034598
Pre-XDR-TB
lineage4.9
pk
ERR1034609
Pre-XDR-TB
lineage4.9
pk
ERR13264943
Pre-XDR-TB
lineage4.9
None
ERR13264964
Pre-XDR-TB
lineage3;lineage4.9
None
ERR2510299
Pre-XDR-TB
lineage4.9
pk
ERR2510301
MDR-TB
lineage4.9
pk
ERR2510315
Pre-XDR-TB
lineage4.9
pk
ERR2510340
MDR-TB
lineage3;lineage4.9
pk
ERR2510384
Pre-XDR-TB
lineage4.9
pk
ERR2510387
MDR-TB
lineage4.9
None
Showing 1 to 10 of 59 entries
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