SRR27450428
|
Sensitive
|
lineage4.5
|
None
|
SRR27450105
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR27450192
|
Sensitive
|
lineage4.9
|
None
|
SRR28859986
|
Sensitive
|
lineage4.5
|
None
|
SRR28860158
|
Sensitive
|
lineage6.2.2
|
None
|
SRR28868398
|
Sensitive
|
lineage3
|
None
|
SRR28868543
|
Other
|
lineage3.1.2
|
None
|
SRR28868600
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868743
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28868770
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450020
|
Sensitive
|
lineage3
|
None
|
SRR26112353
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868768
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR28868794
|
Sensitive
|
lineage4.6.1
|
None
|
SRR28868844
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28868478
|
Sensitive
|
lineage4.8
|
None
|
SRR28860083
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28868350
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28868735
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26112387
|
Sensitive
|
lineage2.2.2
|
None
|
SRR26112352
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR27450044
|
Sensitive
|
lineage4.9
|
None
|
SRR27450030
|
Sensitive
|
lineage4.8
|
None
|
SRR27450407
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR21732949
|
Sensitive
|
lineage1.1.2
|
None
|
SRR21733271
|
Sensitive
|
lineage4.5
|
None
|
SRR26112447
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR21732145
|
Sensitive
|
lineage4.1.2
|
None
|
SRR27450547
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26112557
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR28868805
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR26558626
|
Other
|
lineage2.2.1
|
None
|
SRR28868803
|
Other
|
lineage2.2.1
|
None
|
SRR27450140
|
Sensitive
|
lineage1.1.2
|
None
|
SRR26112586
|
Other
|
lineage2.2.1
|
None
|
SRR27450186
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR27450314
|
Other
|
lineage3
|
None
|
SRR26112407
|
Sensitive
|
lineage4.3.3
|
None
|
SRR21733268
|
Other
|
lineage3
|
None
|
SRR28860155
|
HR-TB
|
lineage4.8
|
None
|
SRR27450017
|
Sensitive
|
lineage1.1.2
|
None
|
DRR473928
|
Other
|
lineage2.2.1
|
None
|
SRR27450590
|
Sensitive
|
lineage4.5
|
None
|
SRR24710067
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26112357
|
Other
|
lineage2.2.1.1
|
None
|
SRR21732879
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26112361
|
Sensitive
|
lineage4.3.3
|
None
|
SRR24799213
|
Other
|
lineage2.2.1.1
|
None
|
SRR27450423
|
Other
|
lineage3.1.2.1
|
None
|
SRR26112216
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR26112411
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR21732833
|
Sensitive
|
lineage3
|
None
|
SRR21732373
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR16088414
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16088123
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827862
|
Pre-XDR-TB
|
lineage1.1.2;lineage2.2.1.1
|
None
|
SRR26112437
|
Sensitive
|
lineage4.9
|
None
|
SRR26112737
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28859592
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28859936
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450409
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868482
|
Other
|
lineage3
|
None
|
SRR28868581
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR24256079
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859807
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868839
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28859642
|
Sensitive
|
lineage4.8
|
None
|
SRR28859712
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859847
|
Sensitive
|
lineage3
|
None
|
SRR28858402
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28859644
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR28868425
|
Sensitive
|
lineage3
|
None
|
SRR28860077
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868405
|
Sensitive
|
lineage3
|
None
|
SRR28859779
|
HR-TB
|
lineage1.1.3.1
|
None
|
SRR28868669
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28868419
|
Other
|
lineage3
|
None
|
SRR28859878
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28868664
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868557
|
Sensitive
|
lineage3
|
None
|
SRR21732798
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28859853
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR26112543
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR28868830
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28859634
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26112732
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868468
|
Other
|
lineage2.2.1
|
None
|
SRR28858411
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR21733265
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21732376
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28868783
|
HR-TB
|
lineage2.2.1
|
None
|
SRR27450001
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR26558622
|
HR-TB
|
lineage4.4.2
|
None
|
SRR27450113
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR27450580
|
Other
|
lineage1.1.1.1
|
None
|
SRR16088038
|
Other
|
lineage4.8
|
None
|
SRR28860207
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28868677
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868560
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR28858546
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR28860098
|
Sensitive
|
lineage1.1.2
|
None
|
SRR21732953
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450291
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26111944
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR473853
|
Other
|
lineage2.2.1
|
None
|
SRR28868542
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859843
|
Other
|
lineage2.2.1
|
None
|
SRR28868656
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR24255946
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR28868562
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28858427
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28868598
|
Other
|
lineage1.2.2.2
|
None
|
SRR28859653
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR28859639
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR25827562
|
XDR-TB
|
lineage2.2.1;lineage4.2.2.2
|
None
|
SRR28858590
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28860206
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859758
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR27449981
|
Sensitive
|
lineage3
|
None
|
SRR28860079
|
Sensitive
|
lineage4.8
|
None
|
SRR28860045
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733347
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR28868550
|
Sensitive
|
lineage3
|
None
|
SRR28859975
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28858477
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859845
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28859881
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR26112413
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28858465
|
RR-TB
|
lineage3
|
None
|
SRR28858649
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28859776
|
Sensitive
|
lineage4.3.4.2
|
None
|
DRR473820
|
Sensitive
|
lineage4.8
|
None
|
SRR28860175
|
Sensitive
|
lineage4.1.1
|
None
|
SRR27450303
|
Sensitive
|
lineage3
|
None
|
SRR27450146
|
Sensitive
|
lineage4.9
|
None
|
SRR27450591
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859708
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28868863
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859977
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR28859958
|
Sensitive
|
lineage4.5
|
None
|
SRR28859844
|
Sensitive
|
lineage4.8
|
None
|
SRR28868650
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28868384
|
Sensitive
|
lineage4.5
|
None
|
SRR27450524
|
Sensitive
|
lineage4.3.1
|
None
|
SRR21733115
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28339303
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21733138
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25827646
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage2.2.1
|
None
|
SRR28858603
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28860118
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR26112811
|
HR-TB
|
lineage4.2.1.1
|
None
|
SRR26112016
|
Other
|
lineage1.1.2
|
None
|
SRR28868817
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR28868701
|
Other
|
lineage4.5
|
None
|
SRR28868521
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR26112750
|
Sensitive
|
lineage4.7
|
None
|
SRR28858397
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28859770
|
Other
|
lineage4.5
|
None
|
SRR28858636
|
Sensitive
|
lineage2.2.1.2
|
None
|
SRR28860084
|
Sensitive
|
lineage2.2.2
|
None
|
SRR28858481
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868351
|
Sensitive
|
lineage4.4.2
|
None
|
SRR28868707
|
Sensitive
|
lineage4.2.2.2
|
None
|
SRR27450145
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR21732591
|
Sensitive
|
lineage4.3.3
|
None
|
SRR27450527
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28858366
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28859590
|
Sensitive
|
lineage6.3.1
|
None
|
SRR28868457
|
Other
|
lineage4.4
|
None
|
SRR28868472
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR21732586
|
Sensitive
|
lineage4.1.2
|
None
|
SRR21732962
|
Other
|
lineage3
|
None
|
SRR21733121
|
Sensitive
|
lineage4.2.2
|
None
|
SRR21732838
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR24466757
|
Sensitive
|
lineage4
|
None
|
SRR26112603
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR26112551
|
Sensitive
|
lineage3
|
None
|
SRR27450210
|
Sensitive
|
lineage3
|
None
|
SRR21733127
|
Sensitive
|
lineage3
|
None
|
SRR27450008
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR26112439
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR21733190
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28859752
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28868422
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868379
|
Sensitive
|
lineage2.1
|
None
|
SRR28868596
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868509
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28868601
|
Other
|
lineage1.1.1.1
|
None
|
SRR28868737
|
HR-TB
|
La1.2.BCG
|
None
|
SRR27450320
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR27450099
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16088209
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27450577
|
Sensitive
|
lineage4.5
|
None
|
SRR26112777
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733262
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR21732116
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28860150
|
Other
|
La1.7.1
|
None
|
SRR27450156
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21732848
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28868360
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR26111989
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733185
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
DRR473885
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16088104
|
HR-TB
|
lineage4.8
|
None
|
SRR21733273
|
Sensitive
|
lineage6.1.1
|
None
|
SRR21733356
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR21733364
|
Sensitive
|
lineage4.5
|
None
|
SRR27450013
|
Sensitive
|
lineage1.1.2
|
None
|
SRR21733353
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450015
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21732802
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733207
|
Sensitive
|
lineage4.5
|
None
|
SRR21732924
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21733134
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21732814
|
Sensitive
|
lineage4.4.2
|
None
|
SRR27450372
|
HR-TB
|
lineage4.2.2
|
None
|
SRR21732812
|
Sensitive
|
lineage2.2.2
|
None
|
SRR27450331
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR27450341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27450367
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR24799192
|
Sensitive
|
lineage4.8
|
None
|
SRR24710088
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27450286
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868703
|
Other
|
lineage2.2.1
|
None
|
SRR28868780
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR27450019
|
Sensitive
|
lineage3
|
None
|
SRR28868518
|
Sensitive
|
lineage3
|
None
|
SRR28859952
|
Sensitive
|
lineage4.8
|
None
|
SRR28868594
|
Sensitive
|
lineage3
|
None
|
SRR28860049
|
Other
|
lineage4.1.2.1
|
None
|
SRR27450349
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR27450003
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR27450302
|
Sensitive
|
lineage1.1.2
|
None
|
SRR21733270
|
Other
|
lineage2.2.1
|
None
|
SRR27450434
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868578
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28868821
|
Sensitive
|
lineage1.2.1
|
None
|
SRR28860089
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868641
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868651
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28860203
|
Sensitive
|
lineage4.8
|
None
|
SRR28858668
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28860136
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868835
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859651
|
MDR-TB
|
lineage2.2.1.2
|
None
|
SRR28860129
|
Sensitive
|
lineage4.8
|
None
|
SRR28858698
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR27450436
|
Other
|
lineage4.8
|
None
|
SRR28868828
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR27450296
|
Sensitive
|
lineage1.1.2
|
None
|
SRR21733206
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR27450419
|
Sensitive
|
lineage3
|
None
|
SRR28868653
|
HR-TB
|
lineage3
|
None
|
SRR28858419
|
RR-TB
|
lineage1.2.1.2.1
|
None
|
SRR26112581
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28859775
|
Sensitive
|
lineage4.8
|
None
|
SRR26112369
|
Other
|
lineage2.2.1
|
None
|
SRR28858518
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28859867
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR21733233
|
Other
|
lineage1.2.2.2
|
None
|
SRR27450568
|
Sensitive
|
lineage3
|
None
|
SRR28868795
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868713
|
Other
|
lineage3
|
None
|
SRR28858417
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859729
|
Sensitive
|
lineage4.1.4
|
None
|
SRR28859745
|
Sensitive
|
lineage4.3.3
|
None
|
SRR21732965
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28859786
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28858467
|
HR-TB
|
lineage1.2.1.2
|
None
|
SRR28859691
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR28868607
|
Sensitive
|
lineage3
|
None
|
SRR28868467
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28868907
|
Sensitive
|
lineage4.8
|
None
|
SRR28859996
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28860185
|
Other
|
La1.4
|
None
|
SRR27450342
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28858392
|
Other
|
lineage4.3.3
|
None
|
SRR27450098
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28868747
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868705
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28868555
|
Sensitive
|
lineage1.1.1
|
None
|
SRR28868553
|
Sensitive
|
lineage1.1.1.1
|
None
|
SRR28868766
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868552
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868702
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR28868668
|
Sensitive
|
lineage1.1.2
|
None
|
DRR473948
|
Sensitive
|
lineage2.2.1
|
None
|
SRR26111988
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR28860106
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR28868706
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733263
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28868592
|
Sensitive
|
lineage3
|
None
|
SRR25827467
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR28434986
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21732819
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21733354
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868847
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868498
|
Sensitive
|
lineage3
|
None
|
SRR28868885
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28859714
|
Sensitive
|
lineage6.1.1
|
None
|
SRR28868375
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR28859645
|
HR-TB
|
lineage4.8.1
|
None
|
SRR28868426
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733339
|
Sensitive
|
lineage1.1.1
|
None
|
SRR28859635
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16087880
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27450016
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28868762
|
Sensitive
|
lineage2.1
|
None
|
SRR28859603
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859851
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28859880
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28858408
|
Sensitive
|
lineage3
|
None
|
SRR27450357
|
Sensitive
|
lineage3
|
None
|
SRR28868625
|
Sensitive
|
lineage2.2.2
|
None
|
SRR28868565
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859715
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868831
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28859636
|
Sensitive
|
lineage4.3.3
|
None
|
SRR26111940
|
Sensitive
|
lineage3
|
None
|
SRR21733192
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27450300
|
Sensitive
|
lineage4.1.2
|
None
|
SRR28385877
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR27449961
|
Sensitive
|
lineage4.3.3
|
None
|
SRR27450299
|
Other
|
lineage2.2.1
|
None
|
SRR24466765
|
Sensitive
|
lineage4.8
|
None
|
DRR473901
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859646
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28860197
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28868479
|
Other
|
lineage2.2.1.2
|
None
|
SRR28868514
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28868593
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR27449982
|
Sensitive
|
lineage4.2.1.1
|
None
|
SRR27450167
|
Other
|
lineage1.2.2.2
|
None
|
SRR24710078
|
Sensitive
|
lineage4.8
|
None
|
SRR28859859
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28868491
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868811
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28868367
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868736
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868826
|
Sensitive
|
lineage3
|
None
|
SRR28859628
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28859857
|
HR-TB
|
lineage4.1.1
|
None
|
SRR28859923
|
Sensitive
|
lineage3
|
None
|
SRR28868344
|
Sensitive
|
lineage1.1.1
|
None
|
SRR28868474
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28859668
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28858421
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859684
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28860006
|
Sensitive
|
lineage6.2.2
|
None
|
SRR26558633
|
Other
|
lineage3
|
None
|
SRR27449997
|
Sensitive
|
lineage1.1.1
|
None
|
SRR27450209
|
Sensitive
|
lineage4.4.2
|
None
|
SRR16088119
|
Sensitive
|
lineage4.8
|
None
|
SRR26112560
|
Sensitive
|
lineage4.1.1
|
None
|
SRR27450546
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28860046
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR27450422
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR24256130
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28868746
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21733361
|
Sensitive
|
lineage3
|
None
|
SRR27450104
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR27450389
|
Sensitive
|
lineage1.1.3.3
|
None
|
SRR27450395
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16088537
|
Other
|
lineage4.8
|
None
|
SRR27450298
|
Sensitive
|
lineage3.1
|
None
|
SRR27450532
|
HR-TB
|
lineage2.2.1
|
None
|
SRR27450398
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR21733266
|
HR-TB
|
lineage1.1.1
|
None
|
SRR27450508
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR16087896
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27450335
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733345
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR27450141
|
Other
|
lineage2.2.1
|
None
|
SRR28858416
|
Sensitive
|
lineage3
|
None
|
SRR28860139
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28860189
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR28868558
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28860148
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859848
|
Other
|
lineage1.2.2.2
|
None
|
SRR28868739
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868365
|
Sensitive
|
lineage1.2.1
|
None
|
SRR28860191
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28868851
|
Sensitive
|
lineage3
|
None
|
SRR28858531
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868772
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28858728
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28858694
|
Other
|
lineage1.1.1
|
None
|
SRR28868541
|
Sensitive
|
lineage3
|
None
|
SRR28868597
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868475
|
Other
|
lineage3
|
None
|
SRR28868414
|
Sensitive
|
lineage3
|
None
|
SRR24256249
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859915
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR27450509
|
Sensitive
|
lineage3
|
None
|
SRR28868495
|
Other
|
lineage1.1.2
|
None
|
SRR27450406
|
Sensitive
|
lineage4.4.2
|
None
|
SRR28868630
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868849
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR21733359
|
Sensitive
|
lineage4.2.2.1
|
None
|
SRR27450400
|
Sensitive
|
lineage4.6.3
|
None
|
SRR27450424
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR27450427
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27450592
|
Sensitive
|
lineage3
|
None
|
SRR27450353
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28858623
|
Pre-XDR-TB
|
lineage4.1.4
|
None
|
SRR28868588
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR28868679
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28868389
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28858456
|
Other
|
lineage1.1.3.1
|
None
|
SRR28859692
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28868363
|
HR-TB
|
La1.2.BCG
|
None
|
SRR28859855
|
HR-TB
|
lineage4.8.1
|
None
|
SRR28859656
|
Sensitive
|
lineage2.2.2
|
None
|
SRR28860087
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28859782
|
Sensitive
|
lineage3
|
None
|
SRR21733204
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28868589
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28868431
|
Sensitive
|
lineage1.2.2.1
|
None
|
SRR26112350
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28860193
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR28868771
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR25827319
|
Sensitive
|
lineage3
|
None
|
SRR28859709
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28868832
|
Sensitive
|
lineage4.1
|
None
|
SRR26111938
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR16088579
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859765
|
Sensitive
|
lineage4.4.1
|
None
|
SRR28868605
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27450586
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28868649
|
Sensitive
|
lineage3
|
None
|
SRR28860104
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28868512
|
Other
|
lineage4.5
|
None
|
SRR28860166
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28859593
|
HR-TB
|
lineage3
|
None
|
SRR28868483
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR27450337
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28859784
|
Sensitive
|
lineage2.2.1
|
None
|
SRR24710081
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28868599
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28859983
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28859762
|
MDR-TB
|
lineage2.2.1.2
|
None
|
SRR16088584
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR28859748
|
HR-TB
|
La1.2.BCG
|
None
|
SRR28859679
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR24799197
|
Sensitive
|
lineage4.3.2
|
None
|
SRR27450551
|
Sensitive
|
lineage4.8
|
None
|
SRR28868371
|
Sensitive
|
lineage3
|
None
|
DRR473814
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868744
|
Sensitive
|
lineage3
|
None
|
SRR28868463
|
Other
|
lineage1.1.3.2
|
None
|
SRR27450560
|
Sensitive
|
lineage1.1.2
|
None
|
SRR26112773
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450543
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR28868444
|
Sensitive
|
lineage3
|
None
|
SRR27449995
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR24710140
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827564
|
Sensitive
|
lineage3
|
None
|
SRR27450332
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868848
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28860187
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR26112370
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868358
|
RR-TB
|
lineage4.5
|
None
|
SRR28858422
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28868517
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR28860131
|
Other
|
La1.8.1
|
None
|
SRR28868486
|
Other
|
lineage3
|
None
|
SRR28868745
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859604
|
Other
|
lineage4.3.3
|
None
|
SRR28859620
|
Sensitive
|
lineage4.8
|
None
|
SRR26112019
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859744
|
HR-TB
|
La1.2.BCG
|
None
|
SRR28868602
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868590
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28860202
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28868837
|
Sensitive
|
lineage4.4
|
None
|
SRR28859982
|
Sensitive
|
lineage4.8
|
None
|
SRR28858605
|
MDR-TB
|
lineage4
|
None
|
SRR28860102
|
Other
|
lineage3
|
None
|
SRR28860201
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868561
|
Other
|
lineage2.2.1
|
None
|
SRR28859599
|
RR-TB
|
lineage2.2.1
|
None
|
SRR16088026
|
Sensitive
|
lineage4.8
|
None
|
SRR28868845
|
Sensitive
|
lineage2.1
|
None
|
SRR28868825
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28859912
|
Other
|
lineage3
|
None
|
SRR28859710
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR26397813
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR24710064
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28858706
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28858373
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR28868834
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28859778
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28858729
|
HR-TB
|
La1.2.BCG
|
None
|
SRR26112559
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868538
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR27450536
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28859877
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28859616
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28868846
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR21733360
|
Sensitive
|
lineage1.1.2
|
None
|
SRR26558642
|
HR-TB
|
lineage2.1
|
None
|
SRR28860156
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28868488
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28859846
|
Other
|
lineage4.3.3
|
None
|
SRR28859649
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR27450188
|
Other
|
La3
|
None
|
SRR28868852
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28868751
|
Sensitive
|
lineage3
|
None
|
SRR28868714
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR21732955
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR26111954
|
Sensitive
|
lineage4.5
|
None
|
SRR28858472
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28868843
|
Other
|
lineage3
|
None
|
SRR28859743
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR27450397
|
Other
|
La1.2.BCG
|
None
|
SRR21732956
|
Sensitive
|
lineage3.1
|
None
|
SRR21732815
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27450430
|
Sensitive
|
lineage3.1.2
|
None
|
SRR16088016
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27449963
|
Sensitive
|
lineage3
|
None
|
SRR27450425
|
HR-TB
|
La1.2.BCG
|
None
|
SRR16088195
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27450330
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450009
|
Sensitive
|
lineage4.8
|
None
|
SRR27450283
|
Sensitive
|
lineage3
|
None
|
SRR27450589
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28868709
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR28868841
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28859687
|
Sensitive
|
lineage1.1.2
|
None
|
SRR27450346
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868652
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR28868778
|
Sensitive
|
lineage1.1.2
|
None
|
SRR24256022
|
Sensitive
|
lineage4.1.2
|
None
|
SRR21732800
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR26112229
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR27450143
|
Sensitive
|
lineage3
|
None
|
SRR28860204
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR28868838
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR16088192
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868499
|
Sensitive
|
lineage3
|
None
|
SRR28860195
|
Sensitive
|
lineage2.2.1;lineage4.4.2
|
None
|
SRR28868386
|
Sensitive
|
lineage4.3.3
|
None
|
SRR26331594
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR28860085
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28868370
|
HR-TB
|
lineage1.1.2
|
None
|
SRR27450534
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR26112434
|
Sensitive
|
lineage4.8
|
None
|
SRR26112025
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28860001
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR28868894
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859640
|
Sensitive
|
lineage2.2.2
|
None
|
SRR25827660
|
Sensitive
|
lineage3
|
None
|
SRR28868471
|
Sensitive
|
lineage3
|
None
|
SRR28859941
|
Sensitive
|
lineage4.4.2
|
None
|
SRR28859631
|
Sensitive
|
lineage3
|
None
|
SRR28868818
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR28860173
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28868833
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450184
|
Sensitive
|
lineage3.1.1
|
None
|
SRR28868779
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR28868820
|
Sensitive
|
lineage2.1
|
None
|
SRR23861888
|
Sensitive
|
lineage4.8
|
None
|
SRR28859950
|
Other
|
lineage4.3.2
|
None
|
SRR28858748
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR28868460
|
Sensitive
|
lineage3
|
None
|
SRR16088023
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28868564
|
Sensitive
|
lineage4.3.3
|
None
|
SRR26112368
|
Sensitive
|
lineage1.1.3
|
None
|
SRR28868674
|
Sensitive
|
lineage3
|
None
|
SRR27450415
|
Sensitive
|
lineage4.2.2
|
None
|
SRR21733155
|
Sensitive
|
lineage4.8
|
None
|
SRR27450334
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827483
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16088538
|
Sensitive
|
lineage4.8
|
None
|
SRR24710252
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28860186
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28868466
|
Sensitive
|
lineage3
|
None
|
SRR27450343
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28858592
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR26558624
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR26112009
|
HR-TB
|
lineage4.8
|
None
|
SRR27450584
|
Sensitive
|
lineage4.8
|
None
|
SRR28860043
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28858478
|
Sensitive
|
lineage4.9
|
None
|
SRR24255964
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR25827769
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
SRR27450605
|
HR-TB
|
La1.2.BCG
|
None
|
SRR28868642
|
Sensitive
|
lineage4.2.2
|
None
|
SRR28868549
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28868816
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR28868836
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR27450012
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR27450593
|
Sensitive
|
lineage4.3.2
|
None
|
SRR28868587
|
Sensitive
|
lineage4.5
|
None
|
SRR28859629
|
Sensitive
|
lineage2.2.2
|
None
|
SRR28859980
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28859938
|
Sensitive
|
lineage1.1.3
|
None
|
SRR27450142
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR28858451
|
Sensitive
|
lineage4.8
|
None
|
SRR28868583
|
Sensitive
|
lineage3
|
None
|
SRR28859913
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859998
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859624
|
Other
|
lineage4.5
|
None
|
SRR28868781
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28860092
|
Other
|
lineage4.3.4.1
|
None
|
SRR28858400
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR28868525
|
Sensitive
|
lineage1.1.2
|
None
|
SRR16088108
|
Sensitive
|
lineage4.1.2.1;lineage4.8
|
None
|
SRR21732809
|
Sensitive
|
lineage4
|
None
|
SRR28859623
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16088106
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR27450047
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450106
|
MDR-TB
|
lineage3
|
None
|
SRR27450361
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR27450405
|
Sensitive
|
lineage3
|
None
|
SRR27449980
|
Sensitive
|
lineage2.2.1
|
None
|
SRR27450370
|
Other
|
La1.2.BCG
|
None
|
SRR28859769
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28868461
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR26558623
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR28859711
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28859719
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR27449991
|
Sensitive
|
lineage4.1.2
|
None
|
SRR27450503
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
DRR473857
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21732996
|
Other
|
lineage2.2.1
|
None
|
SRR21732808
|
Sensitive
|
lineage3
|
None
|
SRR25827681
|
Other
|
lineage3
|
None
|