Rv0565c - c.405C>T
Drug resistance types
56 Sensitive
35 RR-TB
26 HR-TB
12 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 146 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.2.1;lineage4.8 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 152 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13180217 | HR-TB | lineage4.8 | None | SRR29274016 | RR-TB | lineage4.8 | None | SRR29127078 | Sensitive | lineage4.8 | None | ERR9119114 | Sensitive | lineage4.8 | None | SRR29274017 | RR-TB | lineage4.8 | None | ERR4815520 | Other | lineage4.8 | None | ERR4820962 | Sensitive | lineage4.8 | gb | SRR29274103 | RR-TB | lineage4.8 | None | SRR19303901 | Sensitive | lineage4.8 | None | SRR19304022 | Sensitive | lineage4.8 | None | ERR9119112 | Other | lineage4.8 | None | ERR4818086 | Sensitive | lineage4.8 | None | SRR28351519 | RR-TB | lineage4.8 | None | SRR28646068 | Sensitive | lineage4.8 | None | ERR4820525 | HR-TB | lineage4.8 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR4820049 | Other | lineage4.8 | gb | SRR29273699 | RR-TB | lineage4.8 | None | ERR13284541 | RR-TB | lineage4.8 | None | ERR4818156 | Sensitive | lineage4.8 | gb | SRR10525322 | RR-TB | lineage4.8 | None | ERR4821615 | Other | lineage4.8 | gb | SRR29273727 | RR-TB | lineage4.8 | None | ERR4829531 | Sensitive | lineage4.8 | it | SRR1162958 | Pre-XDR-TB | lineage4.8 | None | ERR4195690 | HR-TB | lineage4.8 | None | ERR4817962 | Sensitive | lineage4.8 | None | ERR9119111 | RR-TB | lineage4.8 | None | SRR21690221 | Sensitive | lineage4.8 | None | SRR29126235 | Sensitive | lineage4.8 | None | SRR29274106 | RR-TB | lineage4.8 | None | ERR13262248 | Sensitive | lineage4.8 | None | SRR28351518 | MDR-TB | lineage4.2.1;lineage4.8 | None | ERR9901118 | Sensitive | lineage4.8 | None | SRR29126216 | Sensitive | lineage4.8 | None | ERR11083032 | RR-TB | lineage4.8 | None | SRR29273628 | Pre-XDR-TB | lineage4.8 | None | SAMN02414886 | Pre-XDR-TB | lineage4.8 | se | ERR11049397 | Sensitive | lineage4.8 | None | ERR4818330 | HR-TB | lineage4.8 | None | SRR24466742 | RR-TB | lineage4.8 | None | ERR4821688 | Sensitive | lineage4.8 | gb | ERR2516158 | HR-TB | lineage4.8 | es | SRR29126187 | HR-TB | lineage4.8 | None | SRR28646111 | RR-TB | lineage4.8 | None | ERR4817116 | Sensitive | lineage4.8 | gb | SRR29274001 | MDR-TB | lineage4.8 | None | SRR29126350 | HR-TB | lineage4.8 | None | SRR19304076 | Sensitive | lineage4.8 | None | ERR2199903 | RR-TB | lineage4.8 | de | SRR29126470 | Sensitive | lineage4.8 | None | ERR2514883 | Sensitive | lineage4.8 | gb | ERR4818868 | Sensitive | lineage4.8 | None | SRR29273716 | RR-TB | lineage4.8 | None | ERR4829859 | HR-TB | lineage4.8 | it | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR4817175 | Other | lineage4.8 | None | ERR4818519 | Other | lineage4.8 | gb | SRR29273609 | MDR-TB | lineage4.8 | None | ERR4820456 | Sensitive | lineage4.8 | None | SRR14782120 | Sensitive | lineage4.8 | None | SRR28646057 | RR-TB | lineage4.8 | None | SRR19303861 | Sensitive | lineage4.8 | None | ERR11044203 | Sensitive | lineage4.8 | None | ERR9119113 | Sensitive | lineage4.8 | None | SRR28646108 | MDR-TB | lineage4.8 | None | ERR2199847 | RR-TB | lineage4.8 | de | SRR1146347 | Pre-XDR-TB | lineage4.8 | None | SRR19304089 | Sensitive | lineage4.8 | None | ERR5908251 | RR-TB | lineage4.8 | None | ERR5908252 | Other | lineage4.8 | None | ERR11082994 | RR-TB | lineage4.8 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4829527 | HR-TB | lineage4.8 | it | SRR10525352 | HR-TB | lineage4.8 | None | SRR7592375 | RR-TB | lineage4.8 | None | ERR4822216 | Sensitive | lineage4.8 | None | SRR29273671 | Pre-XDR-TB | lineage4.8 | None | SRR29273908 | RR-TB | lineage4.8 | None | SRR29273871 | Pre-XDR-TB | lineage4.8 | None | ERR11068294 | HR-TB | lineage4.8 | None | SRR9738554 | RR-TB | lineage4.8 | None | SRR9738514 | RR-TB | lineage4.8 | None | ERR4195339 | HR-TB | lineage4.8 | None | SRR7592325 | MDR-TB | lineage4.8 | None | ERR4819273 | Sensitive | lineage4.8 | None | ERR7911273 | RR-TB | lineage4.8 | md | ERR4816352 | HR-TB | lineage4.8 | gb | ERR9121328 | HR-TB | lineage4.8 | None | ERR11049272 | Sensitive | lineage4.8 | None | ERR4195853 | Sensitive | lineage4.8 | None | ERR552597 | Sensitive | lineage4.8 | de | ERR13290360 | Pre-XDR-TB | lineage4.8 | None | ERR4195426 | HR-TB | lineage4.8 | None | SRR24466743 | RR-TB | lineage4.8 | None | ERR11044949 | HR-TB | lineage4.8 | None | SRR24466790 | MDR-TB | lineage4.8 | None | ERR4814307 | HR-TB | lineage4.8 | None | ERR5908216 | Sensitive | lineage4.8 | None | SRR29341533 | Sensitive | lineage4.8 | None | ERR4816098 | Sensitive | lineage4.8 | gb | ERR13292557 | Sensitive | lineage4.8 | None | ERR9121187 | HR-TB | lineage4.8 | None | ERR9121689 | HR-TB | lineage4.8 | None | SRR29273735 | MDR-TB | lineage4.8 | None | ERR5908158 | Sensitive | lineage4.8 | None | SRR5486903 | RR-TB | lineage4.8 | None | ERR4819035 | Sensitive | lineage4.8 | None | SRR29273801 | Pre-XDR-TB | lineage4.8 | None | ERR1465864 | RR-TB | lineage4.8 | None | SRR7592371 | RR-TB | lineage4.8 | None | ERR4820666 | Other | lineage4.8 | gb | ERR3994113 | HR-TB | lineage4.8 | None | SRR14801779 | RR-TB | lineage4.8 | None | SRR19115707 | Sensitive | lineage4.8 | None | SRR9738498 | RR-TB | lineage4.8 | None | ERR4816049 | HR-TB | lineage4.8 | gb | ERR4821902 | Sensitive | lineage4.8 | gb | ERR11068906 | RR-TB | lineage4.8 | None | ERR13290359 | Pre-XDR-TB | lineage4.8 | None | SRR10525371 | RR-TB | lineage4.8 | None | ERR2514607 | Sensitive | lineage4.8 | gb | SRR22048463 | Sensitive | lineage4.8 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR1144769 | Pre-XDR-TB | lineage4.8 | None | SRR19303891 | Sensitive | lineage4.8 | None | ERR4821676 | HR-TB | lineage4.8 | None | ERR4820679 | Other | lineage4.8 | None | SRR10525358 | MDR-TB | lineage4.8 | None | ERR9121482 | Sensitive | lineage4.8 | None | ERR11044757 | Sensitive | lineage4.8 | None | SRR22048423 | Sensitive | lineage4.8 | None | ERR4822626 | Sensitive | lineage4.8 | None | ERR4195766 | HR-TB | lineage4.8 | None | SRR29273879 | RR-TB | lineage4.8 | None | ERR11043541 | Sensitive | lineage4.8 | None | ERR11049082 | Sensitive | lineage4.8 | None | SRR29273605 | HR-TB | lineage4.8 | None | ERR4819394 | Sensitive | lineage4.8 | None | ERR4820487 | Sensitive | lineage4.8 | gb | SRR1163046 | Pre-XDR-TB | lineage4.8 | None | ERR13290358 | Pre-XDR-TB | lineage4.8 | None | SRR29273688 | HR-TB | lineage4.8 | None | SRR14801911 | Sensitive | lineage4.8 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR29274144 | RR-TB | lineage4.8 | None | ERR5979486 | Sensitive | lineage4.8 | None | ERR11044758 | Sensitive | lineage4.8 | None | ERR13290361 | Pre-XDR-TB | lineage4.8 | None | ERR550666 | RR-TB | lineage4.8 | None | ERR4818300 | Sensitive | lineage4.8 | None | ERR2200028 | HR-TB | lineage4.8 | de |
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