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SRA data
Rv0565c
- c.405C>T
Drug resistance types
56 Sensitive
35 RR-TB
26 HR-TB
12 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.8
146
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
La3;M.canetti;lineage2;lineage4.2;lineage4.3
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
1
La1.6;La3;M.canetti;lineage4.2.2
1
lineage4.2.1;lineage4.8
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
152
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR11043541
Sensitive
lineage4.8
None
ERR11044203
Sensitive
lineage4.8
None
ERR11044757
Sensitive
lineage4.8
None
ERR11044758
Sensitive
lineage4.8
None
ERR11044949
HR-TB
lineage4.8
None
ERR11049082
Sensitive
lineage4.8
None
ERR11049272
Sensitive
lineage4.8
None
ERR11049397
Sensitive
lineage4.8
None
ERR11068294
HR-TB
lineage4.8
None
Showing 1 to 10 of 152 entries
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