lineage | Count |
---|---|
lineage2.2.2 | 68 |
lineage2.2.1;lineage2.2.2 | 1 |
lineage1.1.2 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 71 |
ID | Drug resistance | Lineage | Country iso2 | SRR28119786 | MDR-TB | lineage2.2.2 | None | SRR25534227 | Sensitive | lineage2.2.2 | None | SRR25515673 | Sensitive | lineage2.2.2 | None | SRR21887709 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887696 | MDR-TB | lineage2.2.2 | None | ERR2512851 | Pre-XDR-TB | lineage2.2.2 | gb | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887706 | Pre-XDR-TB | lineage2.2.2 | None | SRR25515105 | Sensitive | lineage2.2.2 | None | SRR2099982 | Pre-XDR-TB | lineage2.2.2 | None | SRR671797 | Pre-XDR-TB | lineage2.2.2 | cn | ERR4829636 | MDR-TB | lineage2.2.2 | it | SRR21887653 | Pre-XDR-TB | lineage2.2.2 | None | SRR12420270 | Pre-XDR-TB | lineage2.2.2 | None | SRR25515797 | HR-TB | lineage2.2.2 | None | SRR21277269 | MDR-TB | lineage2.2.2 | None | SRR1723420 | HR-TB | lineage2.2.2 | cn | SRR21277272 | MDR-TB | lineage2.2.2 | None | SRR13423556 | HR-TB | lineage2.2.2 | None | SRR10040358 | MDR-TB | lineage2.2.2 | None | SRR10040216 | Pre-XDR-TB | lineage2.2.2 | None | ERR2517022 | Pre-XDR-TB | lineage2.2.2 | gb | SRR13423548 | Pre-XDR-TB | lineage2.2.2 | None | ERR4828975 | MDR-TB | lineage2.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | DRR130080 | Pre-XDR-TB | lineage2.2.2 | None | SRR2100250 | Pre-XDR-TB | lineage2.2.2 | None | SRR27069421 | Pre-XDR-TB | lineage2.2.2 | None | SRR29126783 | MDR-TB | lineage2.2.2 | None | SRR18002938 | Sensitive | lineage2.2.2 | None | SRR10040433 | MDR-TB | lineage2.2.2 | None | SRR15368764 | Pre-XDR-TB | lineage2.2.2 | None | SRR21031685 | Pre-XDR-TB | lineage2.2.2 | None | SRR6824581 | MDR-TB | lineage2.2.1;lineage2.2.2 | cn | SRR18054800 | MDR-TB | lineage2.2.2 | None | ERR270693 | Pre-XDR-TB | lineage2.2.2 | None | SRR19612359 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887727 | MDR-TB | lineage2.2.2 | None | SRR13423570 | HR-TB | lineage2.2.2 | None | SRR25206913 | Pre-XDR-TB | lineage2.2.2 | None | SRR25207180 | XDR-TB | lineage2.2.2 | None | SRR6824567 | MDR-TB | lineage2.2.2 | cn | SRR6824609 | MDR-TB | lineage2.2.2 | cn | SRR25515795 | Sensitive | lineage2.2.2 | None | SRR25515172 | Sensitive | lineage2.2.2 | None | SRR21277259 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040536 | MDR-TB | lineage2.2.2 | None | SRR25515023 | Sensitive | lineage2.2.2 | None | SRR28119830 | MDR-TB | lineage2.2.2 | None | SRR671855 | Pre-XDR-TB | lineage2.2.2 | cn | SRR10040273 | MDR-TB | lineage2.2.2 | None | SRR1723419 | MDR-TB | lineage2.2.2 | cn | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR4829411 | MDR-TB | lineage2.2.2 | None | SRR17406744 | MDR-TB | lineage1.1.2 | None | SRR18500609 | Sensitive | lineage2.2.2 | None | SRR25206984 | MDR-TB | lineage2.2.2 | None | SRR1723418 | Sensitive | lineage2.2.2 | cn | SRR25207125 | MDR-TB | lineage2.2.2 | None | SRR21887739 | MDR-TB | lineage2.2.2 | None | SRR21887683 | Pre-XDR-TB | lineage2.2.2 | None | ERR11082293 | Pre-XDR-TB | lineage2.2.2 | None | SRR28045830 | Sensitive | lineage3 | None | SRR29385399 | MDR-TB | lineage2.2.2 | None | SRR29385412 | Pre-XDR-TB | lineage2.2.2 | None | SRR29385421 | Pre-XDR-TB | lineage2.2.2 | None | SRR29385426 | Pre-XDR-TB | lineage2.2.2 | None | SRR29385461 | Pre-XDR-TB | lineage2.2.2 | None | SRR29385464 | HR-TB | lineage2.2.2 | None | SRR29914422 | Pre-XDR-TB | lineage2.2.2 | None | SRR29914431 | Pre-XDR-TB | lineage2.2.2 | None |
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