Rv0639 - c.-98C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
2 Sensitive
0 RR-TB
4 HR-TB
92 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 1 |
| lineage4.6.5 | 92 |
| lineage1.1.2 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 103 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8975974 | Sensitive | lineage4.8 | None | ERR11043665 | MDR-TB | lineage4.6.5 | None | ERR11049438 | MDR-TB | lineage4.6.5 | None | ERR11081049 | MDR-TB | lineage4.6.5 | None | ERR2512992 | Sensitive | lineage1.1.2 | gb | ERR2120259 | MDR-TB | lineage4.6.5 | None | ERR11044102 | MDR-TB | lineage4.6.5 | None | ERR11082694 | MDR-TB | lineage4.6.5 | None | ERR11043111 | MDR-TB | lineage4.6.5 | None | ERR13276215 | MDR-TB | lineage4.6.5 | None | SRR5818633 | MDR-TB | lineage4.6.5 | dj | SRR5818640 | MDR-TB | lineage4.6.5 | dj | ERR9117701 | MDR-TB | lineage4.6.5 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR11049467 | MDR-TB | lineage4.6.5 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR2120267 | MDR-TB | lineage4.6.5 | None | ERR4828980 | MDR-TB | lineage4.6.5 | None | SRR7829594 | MDR-TB | lineage4.6.5 | None | ERR11081160 | MDR-TB | lineage4.6.5 | None | ERR11081318 | MDR-TB | lineage4.6.5 | None | ERR2120291 | MDR-TB | lineage4.6.5 | None | ERR4828839 | MDR-TB | lineage4.6.5 | None | ERR13276421 | MDR-TB | lineage4.6.5 | None | SRR3082085 | MDR-TB | lineage4.6.5 | None | ERR2120293 | MDR-TB | lineage4.6.5 | None | SRR29341526 | MDR-TB | lineage4.6.5 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR11068067 | MDR-TB | lineage4.6.5 | None | ERR2120248 | MDR-TB | lineage4.6.5 | None | ERR13278947 | MDR-TB | lineage4.6.5 | None | ERR13276133 | MDR-TB | lineage4.6.5 | None | SRR29341502 | MDR-TB | lineage4.6.5 | None | ERR2120274 | MDR-TB | lineage4.6.5 | None | ERR11081348 | MDR-TB | lineage4.6.5 | None | ERR11044069 | MDR-TB | lineage4.6.5 | None | ERR11081688 | MDR-TB | lineage4.6.5 | None | ERR4831324 | MDR-TB | lineage4.6.5 | de | ERR11044129 | MDR-TB | lineage4.6.5 | None | ERR2120264 | MDR-TB | lineage4.6.5 | None | ERR2120288 | MDR-TB | lineage4.6.5 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2120289 | MDR-TB | lineage4.6.5 | None | ERR11044170 | MDR-TB | lineage4.6.5 | None | ERR4828826 | MDR-TB | lineage4.6.5 | it | ERR4829100 | MDR-TB | lineage4.6.5 | dj | ERR11081093 | MDR-TB | lineage4.6.5 | None | ERR2120249 | MDR-TB | lineage4.6.5 | None | ERR2516969 | MDR-TB | lineage4.6.5 | gb | ERR2516289 | MDR-TB | lineage4.6.5 | be | SRR3082076 | MDR-TB | lineage4.6.5 | None | ERR4822294 | MDR-TB | lineage4.6.5 | None | SRR5818696 | MDR-TB | lineage4.6.5 | dj | ERR11050867 | MDR-TB | lineage4.6.5 | None | SRR5818574 | MDR-TB | lineage4.6.5 | dj | ERR2677450 | MDR-TB | lineage4.6.5 | de | SRR3085338 | MDR-TB | lineage4.6.5 | None | ERR11043110 | MDR-TB | lineage4.6.5 | None | ERR4828873 | MDR-TB | lineage4.6.5 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR2120266 | MDR-TB | lineage4.6.5 | None | ERR11043614 | MDR-TB | lineage4.6.5 | None | ERR4820865 | MDR-TB | lineage4.6.5 | gb | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2120247 | MDR-TB | lineage4.6.5 | None | ERR2120294 | MDR-TB | lineage4.6.5 | None | ERR2120269 | MDR-TB | lineage4.6.5 | None | ERR13276280 | MDR-TB | lineage4.6.5 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR11044475 | MDR-TB | lineage4.6.5 | None | ERR11044588 | MDR-TB | lineage4.6.5 | None | ERR2120275 | MDR-TB | lineage4.6.5 | None | ERR11043537 | MDR-TB | lineage4.6.5 | None | ERR13276286 | MDR-TB | lineage4.6.5 | None | ERR2120246 | MDR-TB | lineage4.6.5 | None | SRR3085337 | MDR-TB | lineage4.6.5 | None | ERR13276254 | MDR-TB | lineage4.6.5 | None | ERR2120292 | MDR-TB | lineage4.6.5 | None | ERR2120287 | MDR-TB | lineage4.6.5 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR13276387 | MDR-TB | lineage4.6.5 | None | ERR4831233 | MDR-TB | lineage4.6.5 | None | ERR2120295 | MDR-TB | lineage4.6.5 | None | ERR13276369 | MDR-TB | lineage4.6.5 | None | ERR2120286 | MDR-TB | lineage4.6.5 | None | ERR2120268 | MDR-TB | lineage4.6.5 | None | ERR2120270 | MDR-TB | lineage4.6.5 | None | ERR2120290 | MDR-TB | lineage4.6.5 | None | ERR11081207 | MDR-TB | lineage4.6.5 | None | ERR11043121 | MDR-TB | lineage4.6.5 | None | ERR2120257 | MDR-TB | lineage4.6.5 | None | ERR13276411 | MDR-TB | lineage4.6.5 | None | ERR13276423 | MDR-TB | lineage4.6.5 | None | ERR11044365 | MDR-TB | lineage4.6.5 | None | SRR3082086 | MDR-TB | lineage4.6.5 | None | ERR4829377 | MDR-TB | lineage4.6.5 | it | ERR4829104 | MDR-TB | lineage4.6.5 | dj | ERR4828994 | MDR-TB | lineage4.6.5 | it | ERR4830795 | MDR-TB | lineage4.6.5 | et | ERR2120262 | MDR-TB | lineage4.6.5 | None | ERR2120265 | MDR-TB | lineage4.6.5 | None | ERR11043538 | MDR-TB | lineage4.6.5 | None |
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