Rv0643c - c.-188T>C
Drug resistance types
0 Sensitive
1 RR-TB
17 HR-TB
1 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage2.1;lineage4.9 | 7 |
| lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.3.2 | 1 |
| 5 | |
| lineage4.9 | 4 |
| lineage2.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.1.1;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 3 |
| lineage2.2.1 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.8 | 1 |
| M.canetti;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 38 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR4811142 | RR-TB | None | SRR1196546 | Other | lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1173633 | Other | lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4811075 | Other | None | ERR4811311 | Other | None | SRR28119753 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR1184294 | Other | lineage4.9 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | None | SRR3675236 | Other | None | ERR4817893 | Other | lineage4.8 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None |
|---|
