Rv0667 - c.1297_1299dupTTC
Drug resistance types
0 Sensitive
13 RR-TB
0 HR-TB
59 MDR-TB
20 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 6 |
| lineage2.2.1 | 49 |
| lineage4.3.3 | 3 |
| lineage4.6.2.2 | 3 |
| lineage1.2.1.2.1 | 2 |
| lineage4.8 | 4 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage5.1.3 | 1 |
| lineage1.1.2 | 1 |
| lineage3 | 4 |
| lineage4.2.1 | 1 |
| lineage4.1.2.1 | 5 |
| 1 | |
| lineage1.2.2.2 | 1 |
| lineage6.2.2 | 1 |
| lineage4.6.2 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 29 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10767001 | MDR-TB | lineage2.2.1.1 | None | SRR5065497 | MDR-TB | lineage2.2.1 | vn | SRR10303278 | MDR-TB | lineage4.3.3 | None | ERR4423633 | MDR-TB | lineage4.6.2.2 | None | ERR3256143 | MDR-TB | lineage1.2.1.2.1 | ph | SRR2100335 | MDR-TB | lineage2.2.1 | None | SRR1723705 | MDR-TB | lineage2.2.1.1 | None | ERR4832037 | MDR-TB | lineage2.2.1 | vn | SRR2024999 | Pre-XDR-TB | lineage2.2.1 | cn | ERR10748569 | MDR-TB | lineage2.2.1 | None | SAMEA2535039 | MDR-TB | lineage4.8 | uz | ERR3794362 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR2100367 | MDR-TB | lineage2.2.1 | None | ERR4809037 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR8773819 | Pre-XDR-TB | lineage2.2.1 | None | ERR117735 | MDR-TB | lineage2.2.1 | None | ERR550972 | RR-TB | lineage4.6.1.2 | cg | SRR1166938 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869317 | MDR-TB | lineage4.3.4.2.1 | None | SRR6824682 | MDR-TB | lineage2.2.1 | cn | ERR751315 | RR-TB | lineage5.1.3 | gh | ERR11082316 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824525 | MDR-TB | lineage2.2.1.1 | cn | SRR10766998 | MDR-TB | lineage2.2.1.1 | None | SRR26331647 | RR-TB | lineage2.2.1 | None | ERR4553685 | RR-TB | lineage1.1.2 | None | SRR8422960 | MDR-TB | lineage2.2.1 | None | SRR21279371 | MDR-TB | lineage2.2.1.1 | None | SRR8365896 | MDR-TB | lineage2.2.1 | None | SRR5709773 | MDR-TB | lineage2.2.1 | th | SRR3055243 | MDR-TB | lineage2.2.1 | None | ERR11043746 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662538 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866483 | Pre-XDR-TB | lineage2.2.1 | None | SRR6964621 | MDR-TB | lineage3 | None | SRR28119840 | RR-TB | lineage2.2.1 | None | SRR11662494 | MDR-TB | lineage2.2.1 | None | ERR4822581 | MDR-TB | lineage4.2.1 | tm | ERR4813290 | MDR-TB | lineage4.1.2.1 | pe | SRR13180309 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025354 | MDR-TB | lineage4.1.2.1 | None | SRR1140948 | RR-TB | lineage2.2.1 | None | ERR4553495 | MDR-TB | None | SRR28393630 | MDR-TB | lineage4.1.2.1 | None | SRR28706658 | MDR-TB | lineage4.3.3 | None | ERR2510326 | MDR-TB | lineage3 | pk | ERR4829071 | RR-TB | lineage4.6.2.2 | ng | ERR552970 | MDR-TB | lineage4.8 | None | ERR552971 | MDR-TB | lineage4.8 | None | ERR4553861 | MDR-TB | lineage1.2.2.2 | None | SRR10430354 | MDR-TB | lineage4.3.3 | None | SAMN02414989 | Pre-XDR-TB | lineage2.2.1 | se | SRR12420286 | RR-TB | lineage2.2.1 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR6824286 | Pre-XDR-TB | lineage2.2.1 | cn | ERR8774255 | MDR-TB | lineage4.6.2.2 | None | ERR10680147 | MDR-TB | lineage6.2.2 | None | SRR10040286 | MDR-TB | lineage2.2.1 | None | ERR114488 | MDR-TB | lineage2.2.1 | None | ERR5917724 | MDR-TB | lineage2.2.1 | by | ERR3273212 | MDR-TB | lineage2.2.1 | None | SRR10305628 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969541 | MDR-TB | lineage2.2.1 | None | SRR21576702 | RR-TB | lineage2.2.1 | None | SRR26937053 | MDR-TB | lineage2.2.1.1 | None | ERR4812802 | MDR-TB | lineage4.1.2.1 | None | SAMN02350466 | RR-TB | lineage2.2.1 | za | ERR7737930 | MDR-TB | lineage4.3.4.2.1 | None | SRR22873602 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810866 | Pre-XDR-TB | lineage2.2.1 | cn | ERR117716 | MDR-TB | lineage2.2.1 | None | ERR3639764 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370394 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207388 | Pre-XDR-TB | lineage2.2.1 | None | ERR11775768 | MDR-TB | lineage2.2.1 | None | ERR2510368 | Pre-XDR-TB | lineage3 | pk | ERR3256144 | MDR-TB | lineage1.2.1.2.1 | ph | ERR550973 | RR-TB | lineage4.6.1.2 | cg | ERR4832019 | MDR-TB | lineage2.2.1 | vn | SRR8422493 | MDR-TB | lineage2.2.1 | None | SRR5817467 | MDR-TB | lineage3 | au | ERR2307641 | MDR-TB | lineage2.2.1 | None | SRR1162726 | Pre-XDR-TB | lineage2.2.1 | None | SRR2100390 | MDR-TB | lineage2.2.1 | None | SRR1723739 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2516464 | MDR-TB | lineage4.1.2.1 | pe | SRR24114359 | RR-TB | lineage4.6.2 | None | SRR6824634 | MDR-TB | lineage4.4.2 | cn | SRR1019144 | RR-TB | lineage2.2.1 | None | ERR552970_ERR552971 | MDR-TB | lineage4.8 | None | SRR1723458 | MDR-TB | lineage2.2.1 | cn |
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