lineage | Count |
---|---|
lineage2.2.1 | 35 |
lineage3.1.2.1 | 3 |
lineage4.5 | 4 |
lineage4.2.2 | 5 |
lineage1.1.2 | 4 |
lineage4.3.3 | 10 |
lineage2.2.1.1 | 10 |
lineage2.2.2 | 8 |
lineage4.3.4.2 | 2 |
lineage4.7 | 1 |
lineage4.8 | 1 |
lineage4.1.2.1 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 85 |
ID | Drug resistance | Lineage | Country iso2 | ERR9806799 | RR-TB | lineage2.2.1 | None | SRR24256060 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049573 | MDR-TB | lineage3.1.2.1 | None | SRR8651617 | Pre-XDR-TB | lineage4.5 | None | DRR130185 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662640 | MDR-TB | lineage2.2.1 | None | ERR4810465 | MDR-TB | lineage4.2.2 | cn | SRR3085330 | MDR-TB | lineage1.1.2 | None | SRR9971335 | Pre-XDR-TB | lineage4.3.3 | None | SRR25207214 | MDR-TB | lineage4.2.2 | None | SRR1165662 | MDR-TB | lineage4.3.3 | None | SRR6785451 | MDR-TB | lineage2.2.1 | None | SRR5709880 | MDR-TB | lineage2.2.1 | th | SRR28467057 | MDR-TB | lineage2.2.1 | None | ERR3273145 | MDR-TB | lineage2.2.1 | None | SRR1165716 | MDR-TB | lineage4.3.3 | None | ERR7737732 | MDR-TB | lineage2.2.1.1 | None | ERR2517113 | MDR-TB | lineage1.1.2 | gb | SRR29772635 | RR-TB | lineage2.2.1.1 | None | SRR8651556 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13288958 | XDR-TB | lineage4.3.3 | None | SRR1167373 | MDR-TB | lineage4.3.3 | None | SRR16156229 | RR-TB | lineage2.2.1.1 | None | SRR20632793 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156275 | RR-TB | lineage2.2.1.1 | None | SRR10040341 | Pre-XDR-TB | lineage2.2.1 | None | SRR12062495 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232608 | XDR-TB | lineage2.2.1 | None | SRR11662279 | MDR-TB | lineage2.2.1 | None | ERR5917970 | XDR-TB | lineage4.3.3 | za | ERR502946 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156284 | RR-TB | lineage2.2.1.1 | None | SRR21747034 | RR-TB | lineage4.5 | None | ERR13289374 | RR-TB | lineage2.2.1 | None | SRR19612245 | MDR-TB | lineage2.2.1 | None | SRR25207344 | MDR-TB | lineage4.2.2 | None | ERR2516696 | Pre-XDR-TB | lineage4.3.4.2 | pe | SRR671804 | Pre-XDR-TB | lineage2.2.2 | cn | SRR16087898 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723426 | Pre-XDR-TB | lineage2.2.2 | cn | ERR11044327 | MDR-TB | lineage2.2.1 | None | ERR7737771 | RR-TB | lineage2.2.1 | None | SRR10305976 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156294 | RR-TB | lineage2.2.1.1 | None | ERR4827786 | MDR-TB | lineage4.7 | None | SRR12062558 | Pre-XDR-TB | lineage2.2.1 | None | ERR2200025 | RR-TB | lineage2.2.1 | sz | SRR12420592 | MDR-TB | lineage2.2.1 | None | SAMN02403573 | MDR-TB | lineage4.3.3 | za | SRR10040367 | MDR-TB | lineage4.5 | None | SRR10040449 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290773 | Pre-XDR-TB | lineage4.5 | None | SRR29093108 | MDR-TB | lineage2.2.1 | None | ERR4831735 | MDR-TB | lineage2.2.1 | vn | SRR14807559 | MDR-TB | lineage2.2.1 | None | ERR4827622 | RR-TB | lineage4.8 | None | SRR3082072 | MDR-TB | lineage1.1.2 | None | SRR12142407 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516920 | MDR-TB | lineage4.1.2.1 | gb | ERR13286125 | Pre-XDR-TB | lineage4.3.3 | None | ERR2517096 | MDR-TB | lineage2.2.1 | gb | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR10040459 | Pre-XDR-TB | lineage4.2.2 | None | SRR29539135 | MDR-TB | lineage4.3.3 | None | SAMN02403572 | MDR-TB | lineage4.3.3 | za | SRR28044360 | MDR-TB | lineage4.3.4.2 | None | SRR25207139 | MDR-TB | lineage2.2.1 | None | ERR5758420 | RR-TB | lineage2.2.1.1 | None | ERR1035045 | RR-TB | lineage2.2.1.1 | za | SRR20632823 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02380987 | MDR-TB | lineage3.1.2.1 | ug | SRR13232611 | MDR-TB | lineage2.2.1 | None | ERR10610308 | RR-TB | lineage2.2.1 | None | SRR28859834 | Pre-XDR-TB | lineage3 | None | SRR1049574 | MDR-TB | lineage3.1.2.1 | None | SRR11662671 | MDR-TB | lineage2.2.1 | None | SRR5818570 | MDR-TB | lineage1.1.2 | dj | SRR6824594 | Pre-XDR-TB | lineage2.2.2 | cn | SRR5073870 | MDR-TB | lineage2.2.1 | vn | ERR4810989 | MDR-TB | lineage2.2.1 | cn | ERR9027258 | MDR-TB | lineage2.2.1 | None | ERR4811338 | MDR-TB | lineage4.2.2 | cn | SRR16156293 | RR-TB | lineage2.2.1.1 | None | SRR21675850 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11466339 | RR-TB | lineage2.2.1 | None |
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