| lineage | Count |
|---|---|
| lineage4.6.1.2 | 12 |
| lineage4.1.2.1 | 4 |
| lineage4.2.2.2 | 10 |
| lineage5.1.4 | 2 |
| lineage4.1.3 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage3.1.1;lineage4.2.2.2 | 2 |
| lineage2.2.1 | 7 |
| lineage4.9 | 4 |
| lineage1.1.2;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage4.3.3 | 6 |
| lineage1.1.3.2 | 1 |
| lineage4.3 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage3 | 1 |
| lineage4.8 | 1 |
| lineage2.1 | 1 |
| lineage4.3.3;lineage4.3.4.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | 1 |
| spoligotype | Count |
|---|---|
| None | 60 |
| ID | Drug resistance | Lineage | Country iso2 | SRR29231791 | MDR-TB | lineage4.6.1.2 | None | SRR28393351 | MDR-TB | lineage4.1.2.1 | None | ERR2707052 | MDR-TB | lineage4.6.1.2 | cd | ERR3078007 | MDR-TB | lineage4.2.2.2 | None | ERR702408 | MDR-TB | lineage5.1.4 | gh | ERR751314 | MDR-TB | lineage5.1.4 | gh | SRR13583504 | MDR-TB | lineage4.1.2.1 | None | ERR10680226 | MDR-TB | lineage4.1.3 | None | ERR6336710 | RR-TB | lineage1.2.1.2.1 | None | SRR19428504 | MDR-TB | lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | None | ERR3077963 | MDR-TB | lineage3.1.1;lineage4.2.2.2 | None | SRR12420319 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420752 | MDR-TB | lineage2.2.1 | None | SRR7070283 | MDR-TB | lineage4.2.2.2 | None | SRR5485404 | RR-TB | lineage4.9 | None | ERR4596908 | MDR-TB | lineage4.2.2.2 | None | ERR3077954 | MDR-TB | lineage4.2.2.2 | None | SRR19428529 | MDR-TB | lineage1.1.2;lineage3.1.1;lineage4.2.2.2 | None | SRR29231784 | MDR-TB | lineage4.6.1.2 | None | SRR16088177 | MDR-TB | lineage4.3.3 | None | ERR3077938 | MDR-TB | lineage4.2.2.2 | None | ERR4596936 | MDR-TB | lineage4.2.2.2 | None | SRR28393263 | MDR-TB | lineage4.1.2.1 | None | ERR2707072 | Pre-XDR-TB | lineage4.6.1.2 | cd | ERR2707051 | MDR-TB | lineage4.6.1.2 | cd | ERR751401 | MDR-TB | lineage4.3.3 | pe | DRR130114 | Pre-XDR-TB | lineage2.2.1 | None | ERR1199106 | MDR-TB | lineage4.6.1.2 | cd | SRR18693871 | MDR-TB | lineage1.1.3.2 | None | SRR12420544 | RR-TB | lineage2.2.1 | None | SRR29772736 | Pre-XDR-TB | lineage4.3 | None | SRR5485411 | RR-TB | lineage4.9 | None | SRR21887652 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231672 | MDR-TB | lineage4.6.1.2 | None | ERR3256138 | MDR-TB | lineage1.2.1.2.1 | ph | ERR4596929 | MDR-TB | lineage3;lineage4.2.2.2 | None | ERR4596911 | MDR-TB | lineage4.2.2.2 | None | SRR29230996 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR5485400 | RR-TB | lineage4.9 | None | ERR12544194 | MDR-TB | lineage4.3.3 | None | ERR1199093 | RR-TB | lineage4.6.1.2 | None | ERR4830158 | MDR-TB | lineage4.3.3 | None | ERR11775914 | MDR-TB | lineage4.2.2.2 | None | ERR2706915 | MDR-TB | lineage4.6.1.2 | cd | SRR5341448 | Pre-XDR-TB | lineage3 | in | ERR1654671 | MDR-TB | lineage4.6.1.2 | None | ERR13258429 | Pre-XDR-TB | lineage2.2.1 | None | ERR9907745 | Pre-XDR-TB | lineage4.3.3 | None | SRR12420289 | RR-TB | lineage2.2.1 | None | SRR5485403 | RR-TB | lineage4.9 | None | ERR3077998 | MDR-TB | lineage3.1.1;lineage4.2.2.2 | None | ERR9907735 | MDR-TB | lineage4.3.3 | None | SRR29539732 | RR-TB | lineage4.8 | None | ERR3077947 | MDR-TB | lineage4.2.2.2 | None | SRR11662439 | MDR-TB | lineage2.1 | None | ERR1034911 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | pt | SRR29051274 | MDR-TB | lineage4.1.2.1 | None | ERR1654709 | RR-TB | lineage4.6.1.2 | None | SRR19392724 | MDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | None | ERR3078000 | MDR-TB | lineage4.2.2.2 | None |
|---|